RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.09
TRAPPC13-208ENST00000505553 STK17AQ9UEE5 414 aa8.21□□□□□ -1.09
TRAPPC13-208ENST00000505553 KDM2AQ9Y2K7 1162 aa8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 PDIA6Q15084 440 aa8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 CADPS2Q86UW7 1296 aa8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 SPRYD3Q8NCJ5 442 aa8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 RBM27Q9P2N5 1060 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-208ENST00000505553 ZNF697Q5TEC3 545 aa8.19□□□□□ -1.1
TRAPPC13-208ENST00000505553 PCDHB3Q9Y5E6 796 aa8.19□□□□□ -1.1
TRAPPC13-208ENST00000505553 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
TRAPPC13-208ENST00000505553 WFS1O76024 890 aa8.17□□□□□ -1.1
TRAPPC13-208ENST00000505553 TPRNQ4KMQ1 711 aa8.17□□□□□ -1.1
TRAPPC13-208ENST00000505553 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
TRAPPC13-208ENST00000505553 INSM1Q01101 510 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-208ENST00000505553 EMID1Q96A84 441 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-208ENST00000505553 AAASQ9NRG9 546 aa8.16□□□□□ -1.1
TRAPPC13-208ENST00000505553 TNFRSF10AO00220 468 aa8.15□□□□□ -1.1
TRAPPC13-208ENST00000505553 GDF9O60383 454 aa8.15□□□□□ -1.1
TRAPPC13-208ENST00000505553 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
TRAPPC13-208ENST00000505553 LIAT1Q6ZQX7 453 aa8.12□□□□□ -1.11
TRAPPC13-208ENST00000505553 LMOD2Q6P5Q4 547 aa8.12□□□□□ -1.11
TRAPPC13-208ENST00000505553 BLOC1S3Q6QNY0 202 aa8.12□□□□□ -1.11
TRAPPC13-208ENST00000505553 GRXCR2A6NFK2 248 aa8.11□□□□□ -1.11
TRAPPC13-208ENST00000505553 WIPF1O43516 503 aa8.1□□□□□ -1.11
TRAPPC13-208ENST00000505553 CRIPAKQ8N1N5 446 aa8.1□□□□□ -1.11
TRAPPC13-208ENST00000505553 TSHZ2Q9NRE2 1034 aa8.1□□□□□ -1.11
TRAPPC13-208ENST00000505553 PPEF1O14829 653 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC13-208ENST00000505553 S1PR4O95977 384 aa8.09□□□□□ -1.11
TRAPPC13-208ENST00000505553 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-208ENST00000505553 TLL1O43897 1013 aa8.08□□□□□ -1.12
TRAPPC13-208ENST00000505553 PRIM1P49642 420 aaKnown RBP8.07□□□□□ -1.12
TRAPPC13-208ENST00000505553 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
TRAPPC13-208ENST00000505553 CDHR5Q9HBB8 845 aa8.07□□□□□ -1.12
TRAPPC13-208ENST00000505553 KMT5BQ4FZB7 885 aa8.06□□□□□ -1.12
TRAPPC13-208ENST00000505553 AXIN1O15169 862 aa8.05□□□□□ -1.12
TRAPPC13-208ENST00000505553 PADI6Q6TGC4 694 aa8.05□□□□□ -1.12
TRAPPC13-208ENST00000505553 ADH1BP00325 375 aa8.04□□□□□ -1.12
TRAPPC13-208ENST00000505553 NFX1Q12986 1120 aaKnown RBP8.04□□□□□ -1.12
TRAPPC13-208ENST00000505553 CTC1Q2NKJ3 1217 aa8.04□□□□□ -1.12
TRAPPC13-208ENST00000505553 GMPR2Q9P2T1 348 aaKnown RBP8.04□□□□□ -1.12
TRAPPC13-208ENST00000505553 AVPP01185 164 aa8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 OSBPP22059 807 aa8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 FOXC1Q12948 553 aa8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 FAM181BA6NEQ2 426 aa8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 ACTN4O43707 911 aaKnown RBP8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 EYA1Q99502 592 aa8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 SLC6A16Q9GZN6 736 aa8.03□□□□□ -1.12
TRAPPC13-208ENST00000505553 NR1I2O75469 434 aa8.02□□□□□ -1.13
TRAPPC13-208ENST00000505553 WDR70Q9NW82 654 aa8.02□□□□□ -1.13
TRAPPC13-208ENST00000505553 PKD2L1Q9P0L9 805 aa8.02□□□□□ -1.13
TRAPPC13-208ENST00000505553 DACH1Q9UI36 760 aa8.01□□□□□ -1.13
TRAPPC13-208ENST00000505553 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC13-208ENST00000505553 DNAJB2P25686 324 aa8□□□□□ -1.13
TRAPPC13-208ENST00000505553 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
TRAPPC13-208ENST00000505553 CYP4X1Q8N118 509 aa8□□□□□ -1.13
TRAPPC13-208ENST00000505553 E2F4Q16254 413 aa7.99□□□□□ -1.13
TRAPPC13-208ENST00000505553 RPIAP49247 311 aa7.98□□□□□ -1.13
TRAPPC13-208ENST00000505553 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
TRAPPC13-208ENST00000505553 NPDC1Q9NQX5 325 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC13-208ENST00000505553 TOR4AQ9NXH8 423 aa7.98□□□□□ -1.13
TRAPPC13-208ENST00000505553 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
TRAPPC13-208ENST00000505553 CD2BP2O95400 341 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-208ENST00000505553 KRTAP4-6Q9BYQ5 205 aa7.97□□□□□ -1.13
TRAPPC13-208ENST00000505553 CFHP08603 1231 aa7.96□□□□□ -1.13
TRAPPC13-208ENST00000505553 TERTO14746 1132 aaKnown RBP7.95□□□□□ -1.14
TRAPPC13-208ENST00000505553 RBM46Q8TBY0 533 aaKnown RBP7.95□□□□□ -1.14
TRAPPC13-208ENST00000505553 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
TRAPPC13-208ENST00000505553 SENP2Q9HC62 589 aa7.94□□□□□ -1.14
TRAPPC13-208ENST00000505553 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-208ENST00000505553 SCUBE3Q8IX30 993 aa7.92□□□□□ -1.14
TRAPPC13-208ENST00000505553 SPSB2Q99619 263 aa7.92□□□□□ -1.14
TRAPPC13-208ENST00000505553 SLC16A10Q8TF71 515 aa7.9□□□□□ -1.14
TRAPPC13-208ENST00000505553 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
TRAPPC13-208ENST00000505553 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
TRAPPC13-208ENST00000505553 TRIM47Q96LD4 638 aa7.89□□□□□ -1.15
TRAPPC13-208ENST00000505553 RSPH4AQ5TD94 716 aa7.88□□□□□ -1.15
TRAPPC13-208ENST00000505553 RCCD1A6NED2 376 aa7.87□□□□□ -1.15
TRAPPC13-208ENST00000505553 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-208ENST00000505553 FCF1Q9Y324 198 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-208ENST00000505553 ZBTB24O43167 697 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-208ENST00000505553 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
TRAPPC13-208ENST00000505553 SLC10A3P09131 477 aa7.86□□□□□ -1.15
TRAPPC13-208ENST00000505553 ADGRG1Q9Y653 693 aa7.86□□□□□ -1.15
TRAPPC13-208ENST00000505553 ZSCAN1Q8NBB4 408 aa7.85□□□□□ -1.15
TRAPPC13-208ENST00000505553 SNIP1Q8TAD8 396 aaKnown RBP7.85□□□□□ -1.15
TRAPPC13-208ENST00000505553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
TRAPPC13-208ENST00000505553 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
TRAPPC13-208ENST00000505553 ERICH6Q7L0X2 663 aa7.83□□□□□ -1.16
TRAPPC13-208ENST00000505553 SMPD1P17405 629 aa7.82□□□□□ -1.16
TRAPPC13-208ENST00000505553 WNT7AO00755 349 aa7.81□□□□□ -1.16
TRAPPC13-208ENST00000505553 PTGDRQ13258 359 aa7.81□□□□□ -1.16
TRAPPC13-208ENST00000505553 IRF7Q92985 503 aa7.8□□□□□ -1.16
TRAPPC13-208ENST00000505553 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-208ENST00000505553 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
TRAPPC13-208ENST00000505553 NPAS3Q8IXF0 933 aa7.79□□□□□ -1.16
TRAPPC13-208ENST00000505553 NXF1Q9UBU9 619 aaKnown RBP7.79□□□□□ -1.16
TRAPPC13-208ENST00000505553 ARHGEF1Q92888 912 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-208ENST00000505553 GMPRP36959 345 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms