RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 ADGRB3O60242 1522 aa24.75■■□□□ 1.55
DDR1-250ENST00000503628 SLC52A1Q9NWF4 448 aa24.74■■□□□ 1.55
DDR1-250ENST00000503628 JCADQ9P266 1359 aa24.74■■□□□ 1.55
DDR1-250ENST00000503628 ANKRD30AQ9BXX3 1397 aa24.73■■□□□ 1.55
DDR1-250ENST00000503628 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.55
DDR1-250ENST00000503628 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
DDR1-250ENST00000503628 MYO5BQ9ULV0 1848 aa24.68■■□□□ 1.54
DDR1-250ENST00000503628 ZFYVE9O95405 1425 aa24.66■■□□□ 1.54
DDR1-250ENST00000503628 PLEKHG1Q9ULL1 1385 aa24.66■■□□□ 1.54
DDR1-250ENST00000503628 COL16A1Q07092 1604 aaPredicted RBP24.65■■□□□ 1.54
DDR1-250ENST00000503628 PPP1R15AO75807 674 aaPredicted RBP24.65■■□□□ 1.54
DDR1-250ENST00000503628 APLP2Q06481 763 aa24.65■■□□□ 1.54
DDR1-250ENST00000503628 RIMS2Q9UQ26 1411 aa24.63■■□□□ 1.53
DDR1-250ENST00000503628 HDGFP51858 240 aaKnown RBP24.63■■□□□ 1.53
DDR1-250ENST00000503628 LRP6O75581 1613 aa24.62■■□□□ 1.53
DDR1-250ENST00000503628 TBX22Q9Y458 520 aa24.62■■□□□ 1.53
DDR1-250ENST00000503628 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
DDR1-250ENST00000503628 MEX3CQ5U5Q3 659 aaKnown RBP24.61■■□□□ 1.53
DDR1-250ENST00000503628 C14orf37Q86TY3 774 aa24.61■■□□□ 1.53
DDR1-250ENST00000503628 GCC2Q8IWJ2 1684 aa24.61■■□□□ 1.53
DDR1-250ENST00000503628 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
DDR1-250ENST00000503628 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
DDR1-250ENST00000503628 NCOA3Q9Y6Q9 1424 aa24.6■■□□□ 1.53
DDR1-250ENST00000503628 ZNF772Q68DY9 489 aaPredicted RBP24.59■■□□□ 1.53
DDR1-250ENST00000503628 TRIM52Q96A61 297 aa24.59■■□□□ 1.53
DDR1-250ENST00000503628 TMEM131LA2VDJ0 1609 aa24.59■■□□□ 1.53
DDR1-250ENST00000503628 ADGRL2O95490 1459 aa24.57■■□□□ 1.52
DDR1-250ENST00000503628 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.56■■□□□ 1.52
DDR1-250ENST00000503628 CHGAP10645 457 aaKnown RBP24.56■■□□□ 1.52
DDR1-250ENST00000503628 NUTM2DQ5VT03 806 aaPredicted RBP24.56■■□□□ 1.52
DDR1-250ENST00000503628 CADPS2Q86UW7 1296 aa24.56■■□□□ 1.52
DDR1-250ENST00000503628 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.55■■□□□ 1.52
DDR1-250ENST00000503628 C19orf44Q9H6X5 657 aa24.55■■□□□ 1.52
DDR1-250ENST00000503628 ANKRD50Q9ULJ7 1429 aa24.54■■□□□ 1.52
DDR1-250ENST00000503628 ATF3P18847 181 aa24.54■■□□□ 1.52
DDR1-250ENST00000503628 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
DDR1-250ENST00000503628 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
DDR1-250ENST00000503628 ADAMTS13Q76LX8 1427 aa24.52■■□□□ 1.52
DDR1-250ENST00000503628 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
DDR1-250ENST00000503628 RXRBP28702 533 aa24.5■■□□□ 1.51
DDR1-250ENST00000503628 NUTM2BA6NNL0 878 aaPredicted RBP24.49■■□□□ 1.51
DDR1-250ENST00000503628 NUTM2EB1AL46 878 aaPredicted RBP24.49■■□□□ 1.51
DDR1-250ENST00000503628 NUTM2AQ8IVF1 878 aaPredicted RBP24.49■■□□□ 1.51
DDR1-250ENST00000503628 BRINP3Q76B58 766 aa24.48■■□□□ 1.51
DDR1-250ENST00000503628 PIK3R4Q99570 1358 aa24.48■■□□□ 1.51
DDR1-250ENST00000503628 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
DDR1-250ENST00000503628 DIP2AQ14689 1571 aa24.46■■□□□ 1.51
DDR1-250ENST00000503628 PTPRUQ92729 1446 aa24.44■■□□□ 1.5
DDR1-250ENST00000503628 E9PCH4 1651 aa24.43■■□□□ 1.5
DDR1-250ENST00000503628 TRPM2O94759 1503 aa24.41■■□□□ 1.5
DDR1-250ENST00000503628 AFF2P51816 1311 aa24.41■■□□□ 1.5
DDR1-250ENST00000503628 UNC13BO14795 1591 aa24.41■■□□□ 1.5
DDR1-250ENST00000503628 CDK12Q9NYV4 1490 aaPredicted RBP24.39■■□□□ 1.5
DDR1-250ENST00000503628 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
DDR1-250ENST00000503628 ASXL1Q8IXJ9 1541 aa24.36■■□□□ 1.49
DDR1-250ENST00000503628 DCCP43146 1447 aa24.35■■□□□ 1.49
DDR1-250ENST00000503628 LRRC59Q96AG4 307 aaKnown RBP24.34■■□□□ 1.49
DDR1-250ENST00000503628 MST1RQ04912 1400 aa24.34■■□□□ 1.49
DDR1-250ENST00000503628 QTRT2Q9H974 415 aaKnown RBP24.33■■□□□ 1.49
DDR1-250ENST00000503628 NHSL1Q5SYE7 1610 aa24.32■■□□□ 1.48
DDR1-250ENST00000503628 IQGAP3Q86VI3 1631 aa24.32■■□□□ 1.48
DDR1-250ENST00000503628 DDX17Q92841 729 aaKnown RBP24.32■■□□□ 1.48
DDR1-250ENST00000503628 C8orf37Q96NL8 207 aa24.32■■□□□ 1.48
DDR1-250ENST00000503628 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
DDR1-250ENST00000503628 NRXN3Q9Y4C0 1643 aa24.31■■□□□ 1.48
DDR1-250ENST00000503628 NUP155O75694 1391 aa24.29■■□□□ 1.48
DDR1-250ENST00000503628 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
DDR1-250ENST00000503628 RGS12O14924 1447 aa24.28■■□□□ 1.48
DDR1-250ENST00000503628 SETBP1Q9Y6X0 1596 aa24.27■■□□□ 1.48
DDR1-250ENST00000503628 METP08581 1390 aa24.27■■□□□ 1.48
DDR1-250ENST00000503628 PNPLA6Q8IY17 1366 aa24.27■■□□□ 1.48
DDR1-250ENST00000503628 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
DDR1-250ENST00000503628 ZNF326Q5BKZ1 582 aaKnown RBP24.25■■□□□ 1.47
DDR1-250ENST00000503628 NGLY1Q96IV0 654 aa24.23■■□□□ 1.47
DDR1-250ENST00000503628 ADGRL3Q9HAR2 1447 aa24.22■■□□□ 1.47
DDR1-250ENST00000503628 ADAMTS2O95450 1211 aa24.22■■□□□ 1.47
DDR1-250ENST00000503628 SRCAPQ6ZRS2 3230 aa24.22■■□□□ 1.47
DDR1-250ENST00000503628 NALCNQ8IZF0 1738 aa24.2■■□□□ 1.46
DDR1-250ENST00000503628 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
DDR1-250ENST00000503628 ITGAEP38570 1179 aa24.17■■□□□ 1.46
DDR1-250ENST00000503628 C1orf167Q5SNV9 1468 aa24.16■■□□□ 1.46
DDR1-250ENST00000503628 USP21Q9UK80 565 aa24.14■■□□□ 1.45
DDR1-250ENST00000503628 ORAI2Q96SN7 254 aa24.13■■□□□ 1.45
DDR1-250ENST00000503628 ATAD2Q6PL18 1390 aa24.13■■□□□ 1.45
DDR1-250ENST00000503628 NEXMIFQ5QGS0 1516 aa24.12■■□□□ 1.45
DDR1-250ENST00000503628 SOS2Q07890 1332 aaPredicted RBP24.11■■□□□ 1.45
DDR1-250ENST00000503628 LAMC1P11047 1609 aa24.11■■□□□ 1.45
DDR1-250ENST00000503628 TRPC5Q9UL62 973 aaPredicted RBP24.11■■□□□ 1.45
DDR1-250ENST00000503628 FNBP4Q8N3X1 1017 aaPredicted RBP24.09■■□□□ 1.45
DDR1-250ENST00000503628 CLTCL1P53675 1640 aa24.08■■□□□ 1.45
DDR1-250ENST00000503628 ROBO2Q9HCK4 1378 aa24.05■■□□□ 1.44
DDR1-250ENST00000503628 PTCH1Q13635 1447 aa24.05■■□□□ 1.44
DDR1-250ENST00000503628 ZRANB1Q9UGI0 708 aa24.05■■□□□ 1.44
DDR1-250ENST00000503628 KIF1BO60333 1816 aa24.05■■□□□ 1.44
DDR1-250ENST00000503628 ATRNO75882 1429 aa24.04■■□□□ 1.44
DDR1-250ENST00000503628 EP400Q96L91 3159 aa24.03■■□□□ 1.44
DDR1-250ENST00000503628 FOXD1Q16676 465 aa24.02■■□□□ 1.44
DDR1-250ENST00000503628 VGFO15240 615 aaPredicted RBP24.01■■□□□ 1.43
DDR1-250ENST00000503628 COL22A1Q8NFW1 1626 aaPredicted RBP24■■□□□ 1.43
DDR1-250ENST00000503628 BCL9LQ86UU0 1499 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms