RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 KCNA6P17658 529 aa21.97■■□□□ 1.11
POLR2J3-207ENST00000503564 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
POLR2J3-207ENST00000503564 SLC26A8Q96RN1 970 aa21.96■■□□□ 1.11
POLR2J3-207ENST00000503564 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
POLR2J3-207ENST00000503564 E9PCH4 1651 aa21.95■■□□□ 1.1
POLR2J3-207ENST00000503564 ROBO1Q9Y6N7 1651 aa21.95■■□□□ 1.1
POLR2J3-207ENST00000503564 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-207ENST00000503564 IQGAP3Q86VI3 1631 aa21.92■■□□□ 1.1
POLR2J3-207ENST00000503564 RIMS2Q9UQ26 1411 aa21.91■■□□□ 1.1
POLR2J3-207ENST00000503564 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
POLR2J3-207ENST00000503564 ROCK1Q13464 1354 aa21.89■■□□□ 1.1
POLR2J3-207ENST00000503564 PROSER2Q86WR7 435 aaPredicted RBP21.89■■□□□ 1.09
POLR2J3-207ENST00000503564 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
POLR2J3-207ENST00000503564 RGS17Q9UGC6 210 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-207ENST00000503564 DIP2AQ14689 1571 aa21.84■■□□□ 1.09
POLR2J3-207ENST00000503564 MSH6P52701 1360 aa21.84■■□□□ 1.09
POLR2J3-207ENST00000503564 ADAMTS13Q76LX8 1427 aa21.83■■□□□ 1.09
POLR2J3-207ENST00000503564 BCANQ96GW7 911 aa21.82■■□□□ 1.08
POLR2J3-207ENST00000503564 PHLPP1O60346 1717 aa21.81■■□□□ 1.08
POLR2J3-207ENST00000503564 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
POLR2J3-207ENST00000503564 HDGFP51858 240 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-207ENST00000503564 TBX22Q9Y458 520 aa21.79■■□□□ 1.08
POLR2J3-207ENST00000503564 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
POLR2J3-207ENST00000503564 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.08
POLR2J3-207ENST00000503564 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.77■■□□□ 1.08
POLR2J3-207ENST00000503564 SPHKAPQ2M3C7 1700 aa21.77■■□□□ 1.08
POLR2J3-207ENST00000503564 NUP155O75694 1391 aa21.76■■□□□ 1.07
POLR2J3-207ENST00000503564 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
POLR2J3-207ENST00000503564 PIK3R4Q99570 1358 aa21.75■■□□□ 1.07
POLR2J3-207ENST00000503564 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-207ENST00000503564 SLAIN2Q9P270 581 aa21.75■■□□□ 1.07
POLR2J3-207ENST00000503564 NRXN3Q9Y4C0 1643 aa21.75■■□□□ 1.07
POLR2J3-207ENST00000503564 TRPM2O94759 1503 aa21.75■■□□□ 1.07
POLR2J3-207ENST00000503564 NUTM2DQ5VT03 806 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-207ENST00000503564 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-207ENST00000503564 JCADQ9P266 1359 aa21.71■■□□□ 1.07
POLR2J3-207ENST00000503564 PTPRUQ92729 1446 aa21.71■■□□□ 1.07
POLR2J3-207ENST00000503564 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
POLR2J3-207ENST00000503564 AHDC1Q5TGY3 1603 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-207ENST00000503564 POTEAQ6S8J7 498 aa21.7■■□□□ 1.06
POLR2J3-207ENST00000503564 ITGAEP38570 1179 aa21.69■■□□□ 1.06
POLR2J3-207ENST00000503564 SHPRHQ149N8 1683 aa21.66■■□□□ 1.06
POLR2J3-207ENST00000503564 LRP6O75581 1613 aa21.66■■□□□ 1.06
POLR2J3-207ENST00000503564 CLTCL1P53675 1640 aa21.66■■□□□ 1.06
POLR2J3-207ENST00000503564 SETD1AO15047 1707 aaKnown RBP21.64■■□□□ 1.06
POLR2J3-207ENST00000503564 C14orf37Q86TY3 774 aa21.64■■□□□ 1.05
POLR2J3-207ENST00000503564 CADPS2Q86UW7 1296 aa21.64■■□□□ 1.05
POLR2J3-207ENST00000503564 C19orf44Q9H6X5 657 aa21.64■■□□□ 1.05
POLR2J3-207ENST00000503564 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
POLR2J3-207ENST00000503564 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
POLR2J3-207ENST00000503564 NEXMIFQ5QGS0 1516 aa21.63■■□□□ 1.05
POLR2J3-207ENST00000503564 DCCP43146 1447 aa21.63■■□□□ 1.05
POLR2J3-207ENST00000503564 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
POLR2J3-207ENST00000503564 ATF3P18847 181 aa21.6■■□□□ 1.05
POLR2J3-207ENST00000503564 KIF1BO60333 1816 aa21.59■■□□□ 1.05
POLR2J3-207ENST00000503564 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.05
POLR2J3-207ENST00000503564 SPATA31A6Q5VVP1 1343 aa21.58■■□□□ 1.05
POLR2J3-207ENST00000503564 ASXL1Q8IXJ9 1541 aa21.58■■□□□ 1.04
POLR2J3-207ENST00000503564 METP08581 1390 aa21.58■■□□□ 1.04
POLR2J3-207ENST00000503564 NAIPQ13075 1403 aa21.57■■□□□ 1.04
POLR2J3-207ENST00000503564 NALCNQ8IZF0 1738 aa21.57■■□□□ 1.04
POLR2J3-207ENST00000503564 MST1RQ04912 1400 aa21.56■■□□□ 1.04
POLR2J3-207ENST00000503564 BRINP3Q76B58 766 aa21.56■■□□□ 1.04
POLR2J3-207ENST00000503564 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
POLR2J3-207ENST00000503564 ADGRL3Q9HAR2 1447 aa21.54■■□□□ 1.04
POLR2J3-207ENST00000503564 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
POLR2J3-207ENST00000503564 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
POLR2J3-207ENST00000503564 PTCH1Q13635 1447 aa21.47■■□□□ 1.03
POLR2J3-207ENST00000503564 MEX3CQ5U5Q3 659 aaKnown RBP21.47■■□□□ 1.03
POLR2J3-207ENST00000503564 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
POLR2J3-207ENST00000503564 PPLO60437 1756 aa21.46■■□□□ 1.03
POLR2J3-207ENST00000503564 LAMC1P11047 1609 aa21.45■■□□□ 1.02
POLR2J3-207ENST00000503564 ZNF772Q68DY9 489 aaPredicted RBP21.45■■□□□ 1.02
POLR2J3-207ENST00000503564 C1orf167Q5SNV9 1468 aa21.41■■□□□ 1.02
POLR2J3-207ENST00000503564 ROBO2Q9HCK4 1378 aa21.41■■□□□ 1.02
POLR2J3-207ENST00000503564 PNPLA6Q8IY17 1366 aa21.4■■□□□ 1.02
POLR2J3-207ENST00000503564 CDK12Q9NYV4 1490 aaPredicted RBP21.39■■□□□ 1.02
POLR2J3-207ENST00000503564 NUTM2BA6NNL0 878 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-207ENST00000503564 NUTM2EB1AL46 878 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-207ENST00000503564 NUTM2AQ8IVF1 878 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-207ENST00000503564 DDX17Q92841 729 aaKnown RBP21.39■■□□□ 1.01
POLR2J3-207ENST00000503564 RPGRIP1LQ68CZ1 1315 aa21.37■■□□□ 1.01
POLR2J3-207ENST00000503564 VGFO15240 615 aaPredicted RBP21.37■■□□□ 1.01
POLR2J3-207ENST00000503564 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
POLR2J3-207ENST00000503564 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
POLR2J3-207ENST00000503564 AFF2P51816 1311 aa21.36■■□□□ 1.01
POLR2J3-207ENST00000503564 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
POLR2J3-207ENST00000503564 IFT172Q9UG01 1749 aa21.35■■□□□ 1.01
POLR2J3-207ENST00000503564 CDC42BPGQ6DT37 1551 aa21.33■■□□□ 1.01
POLR2J3-207ENST00000503564 RXRBP28702 533 aa21.33■■□□□ 1.01
POLR2J3-207ENST00000503564 UPF1Q92900 1129 aaKnown RBP eCLIP21.33■■□□□ 1.01
POLR2J3-207ENST00000503564 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
POLR2J3-207ENST00000503564 COL22A1Q8NFW1 1626 aaPredicted RBP21.31■■□□□ 1
POLR2J3-207ENST00000503564 RGS12O14924 1447 aa21.29■■□□□ 1
POLR2J3-207ENST00000503564 C8orf37Q96NL8 207 aa21.29■■□□□ 1
POLR2J3-207ENST00000503564 ORAI2Q96SN7 254 aa21.29■■□□□ 1
POLR2J3-207ENST00000503564 KNDC1Q76NI1 1749 aa21.29■■□□□ 1
POLR2J3-207ENST00000503564 SPATA31E1Q6ZUB1 1445 aa21.29■■□□□ 1
POLR2J3-207ENST00000503564 FOXD1Q16676 465 aa21.28■■□□□ 1
POLR2J3-207ENST00000503564 CCDC144AA2RUR9 1427 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms