RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 DNAJB2P25686 324 aa9.73□□□□□ -0.85
HMGB1P3-201ENST00000502802 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
HMGB1P3-201ENST00000502802 COG6Q9Y2V7 657 aa9.73□□□□□ -0.85
HMGB1P3-201ENST00000502802 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
HMGB1P3-201ENST00000502802 SPTLC1O15269 473 aa9.72□□□□□ -0.85
HMGB1P3-201ENST00000502802 FBXO31Q5XUX0 539 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P3-201ENST00000502802 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.86
HMGB1P3-201ENST00000502802 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P3-201ENST00000502802 TATDN2Q93075 761 aa9.71□□□□□ -0.86
HMGB1P3-201ENST00000502802 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
HMGB1P3-201ENST00000502802 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
HMGB1P3-201ENST00000502802 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P3-201ENST00000502802 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
HMGB1P3-201ENST00000502802 SCUBE2Q9NQ36 999 aa9.7□□□□□ -0.86
HMGB1P3-201ENST00000502802 SERPINA10Q9UK55 444 aa9.7□□□□□ -0.86
HMGB1P3-201ENST00000502802 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
HMGB1P3-201ENST00000502802 GJA5P36382 358 aa9.69□□□□□ -0.86
HMGB1P3-201ENST00000502802 TMEM134Q9H6X4 195 aa9.69□□□□□ -0.86
HMGB1P3-201ENST00000502802 MOXD2PA6NHM9 499 aa9.68□□□□□ -0.86
HMGB1P3-201ENST00000502802 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
HMGB1P3-201ENST00000502802 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
HMGB1P3-201ENST00000502802 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
HMGB1P3-201ENST00000502802 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
HMGB1P3-201ENST00000502802 LILRB3O75022 631 aa9.66□□□□□ -0.86
HMGB1P3-201ENST00000502802 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
HMGB1P3-201ENST00000502802 NDUFV2P19404 249 aa9.66□□□□□ -0.86
HMGB1P3-201ENST00000502802 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P3-201ENST00000502802 SOCS7O14512 581 aa9.65□□□□□ -0.86
HMGB1P3-201ENST00000502802 HRCP23327 699 aa9.65□□□□□ -0.86
HMGB1P3-201ENST00000502802 RDH13Q8NBN7 331 aa9.65□□□□□ -0.86
HMGB1P3-201ENST00000502802 MTMR14Q8NCE2 650 aa9.65□□□□□ -0.86
HMGB1P3-201ENST00000502802 QPCTQ16769 361 aa9.64□□□□□ -0.87
HMGB1P3-201ENST00000502802 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
HMGB1P3-201ENST00000502802 PRM3Q9NNZ6 103 aa9.64□□□□□ -0.87
HMGB1P3-201ENST00000502802 PLSCR2Q9NRY7 297 aa9.64□□□□□ -0.87
HMGB1P3-201ENST00000502802 SMAPO00193 183 aa9.63□□□□□ -0.87
HMGB1P3-201ENST00000502802 SNPHO15079 494 aa9.63□□□□□ -0.87
HMGB1P3-201ENST00000502802 HOXB1P14653 301 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P3-201ENST00000502802 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
HMGB1P3-201ENST00000502802 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
HMGB1P3-201ENST00000502802 NUTM2BA6NNL0 878 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 NUTM2EB1AL46 878 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 KDM4AO75164 1064 aa9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 AP1G2O75843 785 aa9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 PROX2Q3B8N5 592 aa9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P3-201ENST00000502802 USP46P62068 366 aa9.61□□□□□ -0.87
HMGB1P3-201ENST00000502802 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P3-201ENST00000502802 PRPF38BQ5VTL8 546 aaKnown RBP9.61□□□□□ -0.87
HMGB1P3-201ENST00000502802 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
HMGB1P3-201ENST00000502802 KCNK17Q96T54 332 aa9.61□□□□□ -0.87
HMGB1P3-201ENST00000502802 ABL2P42684 1182 aa9.59□□□□□ -0.87
HMGB1P3-201ENST00000502802 GCGRP47871 477 aa9.59□□□□□ -0.87
HMGB1P3-201ENST00000502802 ZBTB3Q9H5J0 574 aa9.59□□□□□ -0.87
HMGB1P3-201ENST00000502802 KIAA1468Q9P260 1216 aa9.59□□□□□ -0.87
HMGB1P3-201ENST00000502802 HOXA2O43364 376 aa9.58□□□□□ -0.88
HMGB1P3-201ENST00000502802 USP17L8P0C7I0 530 aa9.58□□□□□ -0.88
HMGB1P3-201ENST00000502802 CABLES1Q8TDN4 633 aa9.58□□□□□ -0.88
HMGB1P3-201ENST00000502802 ZBED2Q9BTP6 218 aa9.57□□□□□ -0.88
HMGB1P3-201ENST00000502802 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
HMGB1P3-201ENST00000502802 FDX1P10109 184 aa9.56□□□□□ -0.88
HMGB1P3-201ENST00000502802 ZBTB7CA1YPR0 619 aa9.55□□□□□ -0.88
HMGB1P3-201ENST00000502802 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
HMGB1P3-201ENST00000502802 SLC10A3P09131 477 aa9.54□□□□□ -0.88
HMGB1P3-201ENST00000502802 CALR3Q96L12 384 aaKnown RBP9.54□□□□□ -0.88
HMGB1P3-201ENST00000502802 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
HMGB1P3-201ENST00000502802 RABGEF1Q9UJ41 708 aa9.53□□□□□ -0.88
HMGB1P3-201ENST00000502802 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
HMGB1P3-201ENST00000502802 NDUFB9Q9Y6M9 179 aa9.53□□□□□ -0.88
HMGB1P3-201ENST00000502802 GLMNQ92990 594 aa9.52□□□□□ -0.89
HMGB1P3-201ENST00000502802 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P3-201ENST00000502802 TRAIPQ9BWF2 469 aa9.52□□□□□ -0.89
HMGB1P3-201ENST00000502802 POM121CA8CG34 1229 aa9.51□□□□□ -0.89
HMGB1P3-201ENST00000502802 SLC4A3P48751 1232 aa9.51□□□□□ -0.89
HMGB1P3-201ENST00000502802 PSEN2P49810 448 aa9.51□□□□□ -0.89
HMGB1P3-201ENST00000502802 GUCA2AQ02747 115 aa9.51□□□□□ -0.89
HMGB1P3-201ENST00000502802 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
HMGB1P3-201ENST00000502802 MTMR2Q13614 643 aa9.5□□□□□ -0.89
HMGB1P3-201ENST00000502802 NECTIN2Q92692 538 aa9.5□□□□□ -0.89
HMGB1P3-201ENST00000502802 HLA-CQ95604 372 aa9.5□□□□□ -0.89
HMGB1P3-201ENST00000502802 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
HMGB1P3-201ENST00000502802 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
HMGB1P3-201ENST00000502802 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P3-201ENST00000502802 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
HMGB1P3-201ENST00000502802 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P3-201ENST00000502802 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P3-201ENST00000502802 IRF5Q13568 498 aa9.48□□□□□ -0.89
HMGB1P3-201ENST00000502802 WASHC4Q2M389 1173 aa9.48□□□□□ -0.89
HMGB1P3-201ENST00000502802 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
HMGB1P3-201ENST00000502802 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
HMGB1P3-201ENST00000502802 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
HMGB1P3-201ENST00000502802 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
HMGB1P3-201ENST00000502802 TSC1Q92574 1164 aa9.46□□□□□ -0.9
HMGB1P3-201ENST00000502802 TRIM34Q9BYJ4 488 aa9.46□□□□□ -0.9
HMGB1P3-201ENST00000502802 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
HMGB1P3-201ENST00000502802 FUT2Q10981 343 aa9.45□□□□□ -0.9
HMGB1P3-201ENST00000502802 HDGFL1Q5TGJ6 251 aa9.45□□□□□ -0.9
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