RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
LMNA-219ENST00000502751 HSPA1LP34931 641 aa24.85■■□□□ 1.57
LMNA-219ENST00000502751 RIMS2Q9UQ26 1411 aa24.85■■□□□ 1.57
LMNA-219ENST00000502751 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
LMNA-219ENST00000502751 PPP1R15AO75807 674 aaPredicted RBP24.83■■□□□ 1.57
LMNA-219ENST00000502751 ALKQ9UM73 1620 aa24.83■■□□□ 1.56
LMNA-219ENST00000502751 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
LMNA-219ENST00000502751 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.82■■□□□ 1.56
LMNA-219ENST00000502751 DISP3Q9P2K9 1392 aa24.81■■□□□ 1.56
LMNA-219ENST00000502751 PLEKHG1Q9ULL1 1385 aa24.8■■□□□ 1.56
LMNA-219ENST00000502751 MYO5BQ9ULV0 1848 aa24.79■■□□□ 1.56
LMNA-219ENST00000502751 PROSER2Q86WR7 435 aaPredicted RBP24.78■■□□□ 1.56
LMNA-219ENST00000502751 RBM33Q96EV2 1170 aaKnown RBP24.77■■□□□ 1.56
LMNA-219ENST00000502751 TBX22Q9Y458 520 aa24.77■■□□□ 1.56
LMNA-219ENST00000502751 TMEM94Q12767 1356 aa24.77■■□□□ 1.56
LMNA-219ENST00000502751 HFM1A2PYH4 1435 aa24.77■■□□□ 1.56
LMNA-219ENST00000502751 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
LMNA-219ENST00000502751 XIRP1Q702N8 1843 aaKnown RBP24.71■■□□□ 1.55
LMNA-219ENST00000502751 ADAMTS13Q76LX8 1427 aa24.7■■□□□ 1.55
LMNA-219ENST00000502751 ILDR2Q71H61 639 aa24.7■■□□□ 1.54
LMNA-219ENST00000502751 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
LMNA-219ENST00000502751 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
LMNA-219ENST00000502751 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
LMNA-219ENST00000502751 NWD1Q149M9 1564 aa24.66■■□□□ 1.54
LMNA-219ENST00000502751 NKTRP30414 1462 aaKnown RBP24.65■■□□□ 1.54
LMNA-219ENST00000502751 CHD2O14647 1828 aaKnown RBP24.63■■□□□ 1.53
LMNA-219ENST00000502751 PIK3R4Q99570 1358 aa24.62■■□□□ 1.53
LMNA-219ENST00000502751 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
LMNA-219ENST00000502751 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
LMNA-219ENST00000502751 TRPM2O94759 1503 aa24.61■■□□□ 1.53
LMNA-219ENST00000502751 CLTCL1P53675 1640 aa24.6■■□□□ 1.53
LMNA-219ENST00000502751 MSH6P52701 1360 aa24.59■■□□□ 1.53
LMNA-219ENST00000502751 FOXD1Q16676 465 aa24.59■■□□□ 1.53
LMNA-219ENST00000502751 SLAIN2Q9P270 581 aa24.58■■□□□ 1.53
LMNA-219ENST00000502751 PTPRUQ92729 1446 aa24.57■■□□□ 1.52
LMNA-219ENST00000502751 DIP2AQ14689 1571 aa24.56■■□□□ 1.52
LMNA-219ENST00000502751 MPHOSPH9Q99550 1183 aa24.56■■□□□ 1.52
LMNA-219ENST00000502751 NCOA3Q9Y6Q9 1424 aa24.55■■□□□ 1.52
LMNA-219ENST00000502751 C14orf37Q86TY3 774 aa24.53■■□□□ 1.52
LMNA-219ENST00000502751 C19orf44Q9H6X5 657 aa24.53■■□□□ 1.52
LMNA-219ENST00000502751 METP08581 1390 aa24.53■■□□□ 1.52
LMNA-219ENST00000502751 SETBP1Q9Y6X0 1596 aa24.52■■□□□ 1.52
LMNA-219ENST00000502751 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
LMNA-219ENST00000502751 NRXN3Q9Y4C0 1643 aa24.51■■□□□ 1.51
LMNA-219ENST00000502751 VGFO15240 615 aaPredicted RBP24.51■■□□□ 1.51
LMNA-219ENST00000502751 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
LMNA-219ENST00000502751 MED1Q15648 1581 aaPredicted RBP24.49■■□□□ 1.51
LMNA-219ENST00000502751 KIF1BO60333 1816 aa24.49■■□□□ 1.51
LMNA-219ENST00000502751 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
LMNA-219ENST00000502751 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
LMNA-219ENST00000502751 SOCS7O14512 581 aa24.46■■□□□ 1.51
LMNA-219ENST00000502751 ATF3P18847 181 aa24.46■■□□□ 1.51
LMNA-219ENST00000502751 ROBO1Q9Y6N7 1651 aa24.45■■□□□ 1.5
LMNA-219ENST00000502751 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
LMNA-219ENST00000502751 RGL3Q3MIN7 710 aa24.42■■□□□ 1.5
LMNA-219ENST00000502751 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
LMNA-219ENST00000502751 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
LMNA-219ENST00000502751 XRN1Q8IZH2 1706 aaKnown RBP24.39■■□□□ 1.5
LMNA-219ENST00000502751 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.39■■□□□ 1.5
LMNA-219ENST00000502751 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
LMNA-219ENST00000502751 ADGRF5Q8IZF2 1346 aa24.36■■□□□ 1.49
LMNA-219ENST00000502751 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
LMNA-219ENST00000502751 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
LMNA-219ENST00000502751 RGS17Q9UGC6 210 aaPredicted RBP24.34■■□□□ 1.49
LMNA-219ENST00000502751 DCCP43146 1447 aa24.33■■□□□ 1.49
LMNA-219ENST00000502751 PPLO60437 1756 aa24.32■■□□□ 1.48
LMNA-219ENST00000502751 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
LMNA-219ENST00000502751 ANKRD30BQ9BXX2 1392 aa24.3■■□□□ 1.48
LMNA-219ENST00000502751 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
LMNA-219ENST00000502751 JCADQ9P266 1359 aa24.29■■□□□ 1.48
LMNA-219ENST00000502751 MST1RQ04912 1400 aa24.28■■□□□ 1.48
LMNA-219ENST00000502751 ADGRL3Q9HAR2 1447 aa24.28■■□□□ 1.48
LMNA-219ENST00000502751 SETD1AO15047 1707 aaKnown RBP24.28■■□□□ 1.48
LMNA-219ENST00000502751 HRCP23327 699 aa24.27■■□□□ 1.48
LMNA-219ENST00000502751 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
LMNA-219ENST00000502751 PRAG1Q86YV5 1406 aa24.25■■□□□ 1.47
LMNA-219ENST00000502751 COL16A1Q07092 1604 aaPredicted RBP24.24■■□□□ 1.47
LMNA-219ENST00000502751 TMEM132EQ6IEE7 984 aa24.24■■□□□ 1.47
LMNA-219ENST00000502751 STK26Q9P289 416 aa24.23■■□□□ 1.47
LMNA-219ENST00000502751 AHDC1Q5TGY3 1603 aaPredicted RBP24.23■■□□□ 1.47
LMNA-219ENST00000502751 DDX17Q92841 729 aaKnown RBP24.21■■□□□ 1.47
LMNA-219ENST00000502751 ASXL1Q8IXJ9 1541 aa24.2■■□□□ 1.47
LMNA-219ENST00000502751 WAPLQ7Z5K2 1190 aa24.2■■□□□ 1.46
LMNA-219ENST00000502751 C14orf93Q9H972 538 aaKnown RBP24.2■■□□□ 1.46
LMNA-219ENST00000502751 PIK3C2GO75747 1445 aa24.19■■□□□ 1.46
LMNA-219ENST00000502751 SPATA31A6Q5VVP1 1343 aa24.19■■□□□ 1.46
LMNA-219ENST00000502751 POTEAQ6S8J7 498 aa24.19■■□□□ 1.46
LMNA-219ENST00000502751 NALCNQ8IZF0 1738 aa24.18■■□□□ 1.46
LMNA-219ENST00000502751 LRPPRCP42704 1394 aaKnown RBP24.18■■□□□ 1.46
LMNA-219ENST00000502751 ORAI2Q96SN7 254 aa24.18■■□□□ 1.46
LMNA-219ENST00000502751 C1orf167Q5SNV9 1468 aa24.18■■□□□ 1.46
LMNA-219ENST00000502751 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
LMNA-219ENST00000502751 ABCC11Q96J66 1382 aa24.17■■□□□ 1.46
LMNA-219ENST00000502751 CFAP70Q5T0N1 1121 aa24.16■■□□□ 1.46
LMNA-219ENST00000502751 LRRC59Q96AG4 307 aaKnown RBP24.16■■□□□ 1.46
LMNA-219ENST00000502751 TECPR2O15040 1411 aa24.14■■□□□ 1.45
LMNA-219ENST00000502751 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
LMNA-219ENST00000502751 SIRT1Q96EB6 747 aa24.12■■□□□ 1.45
LMNA-219ENST00000502751 LRP6O75581 1613 aa24.12■■□□□ 1.45
LMNA-219ENST00000502751 YTHDC2Q9H6S0 1430 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms