RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
NFKB1-203ENST00000502367 IRF6O14896 467 aa11.59□□□□□ -0.55
NFKB1-203ENST00000502367 APLP1P51693 650 aa11.59□□□□□ -0.55
NFKB1-203ENST00000502367 MAP2K5Q13163 448 aa11.57□□□□□ -0.56
NFKB1-203ENST00000502367 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
NFKB1-203ENST00000502367 ZMYND10O75800 440 aa11.56□□□□□ -0.56
NFKB1-203ENST00000502367 SLC10A3P09131 477 aa11.56□□□□□ -0.56
NFKB1-203ENST00000502367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
NFKB1-203ENST00000502367 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
NFKB1-203ENST00000502367 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
NFKB1-203ENST00000502367 BCANQ96GW7 911 aa11.54□□□□□ -0.56
NFKB1-203ENST00000502367 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
NFKB1-203ENST00000502367 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-203ENST00000502367 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
NFKB1-203ENST00000502367 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-203ENST00000502367 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
NFKB1-203ENST00000502367 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-203ENST00000502367 COPS2P61201 443 aa11.49□□□□□ -0.57
NFKB1-203ENST00000502367 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
NFKB1-203ENST00000502367 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
NFKB1-203ENST00000502367 MTRQ99707 1265 aa11.48□□□□□ -0.57
NFKB1-203ENST00000502367 CFHP08603 1231 aa11.47□□□□□ -0.57
NFKB1-203ENST00000502367 NYAP1Q6ZVC0 841 aa11.47□□□□□ -0.57
NFKB1-203ENST00000502367 RDH13Q8NBN7 331 aa11.46□□□□□ -0.57
NFKB1-203ENST00000502367 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
NFKB1-203ENST00000502367 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
NFKB1-203ENST00000502367 ITGBL1O95965 494 aaPredicted RBP11.44□□□□□ -0.58
NFKB1-203ENST00000502367 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
NFKB1-203ENST00000502367 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
NFKB1-203ENST00000502367 BLOC1S3Q6QNY0 202 aa11.44□□□□□ -0.58
NFKB1-203ENST00000502367 KCNC4Q03721 635 aa11.43□□□□□ -0.58
NFKB1-203ENST00000502367 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
NFKB1-203ENST00000502367 ACTN4O43707 911 aaKnown RBP11.39□□□□□ -0.59
NFKB1-203ENST00000502367 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
NFKB1-203ENST00000502367 IL21Q9HBE4 155 aa11.38□□□□□ -0.59
NFKB1-203ENST00000502367 TRIM66O15016 1216 aa11.37□□□□□ -0.59
NFKB1-203ENST00000502367 TLL1O43897 1013 aa11.37□□□□□ -0.59
NFKB1-203ENST00000502367 GCGRP47871 477 aa11.37□□□□□ -0.59
NFKB1-203ENST00000502367 FUT2Q10981 343 aa11.37□□□□□ -0.59
NFKB1-203ENST00000502367 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
NFKB1-203ENST00000502367 CD46P15529 392 aa11.36□□□□□ -0.59
NFKB1-203ENST00000502367 NECTIN2Q92692 538 aa11.35□□□□□ -0.59
NFKB1-203ENST00000502367 HLA-CQ95604 372 aa11.35□□□□□ -0.59
NFKB1-203ENST00000502367 AK7Q96M32 723 aa11.35□□□□□ -0.59
NFKB1-203ENST00000502367 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
NFKB1-203ENST00000502367 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-203ENST00000502367 A0A0G2JS52 829 aa11.34□□□□□ -0.59
NFKB1-203ENST00000502367 ZPR1O75312 459 aa11.34□□□□□ -0.59
NFKB1-203ENST00000502367 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-203ENST00000502367 IFFO2Q5TF58 517 aa11.34□□□□□ -0.59
NFKB1-203ENST00000502367 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
NFKB1-203ENST00000502367 CLCN1P35523 988 aa11.33□□□□□ -0.6
NFKB1-203ENST00000502367 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
NFKB1-203ENST00000502367 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-203ENST00000502367 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
NFKB1-203ENST00000502367 PRR14Q9BWN1 585 aa11.32□□□□□ -0.6
NFKB1-203ENST00000502367 AMHR2Q16671 573 aa11.31□□□□□ -0.6
NFKB1-203ENST00000502367 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
NFKB1-203ENST00000502367 PARP9Q8IXQ6 854 aa11.31□□□□□ -0.6
NFKB1-203ENST00000502367 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
NFKB1-203ENST00000502367 MORN1Q5T089 497 aa11.29□□□□□ -0.6
NFKB1-203ENST00000502367 SLC27A5Q9Y2P5 690 aa11.29□□□□□ -0.6
NFKB1-203ENST00000502367 GUCA2AQ02747 115 aa11.28□□□□□ -0.6
NFKB1-203ENST00000502367 PDE4DQ08499 809 aa11.28□□□□□ -0.6
NFKB1-203ENST00000502367 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-203ENST00000502367 MS4A1P11836 297 aa11.27□□□□□ -0.61
NFKB1-203ENST00000502367 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
NFKB1-203ENST00000502367 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
NFKB1-203ENST00000502367 KDM4AO75164 1064 aa11.26□□□□□ -0.61
NFKB1-203ENST00000502367 NR1I2O75469 434 aa11.24□□□□□ -0.61
NFKB1-203ENST00000502367 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
NFKB1-203ENST00000502367 S1PR4O95977 384 aa11.23□□□□□ -0.61
NFKB1-203ENST00000502367 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
NFKB1-203ENST00000502367 BEGAINQ9BUH8 593 aa11.22□□□□□ -0.61
NFKB1-203ENST00000502367 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-203ENST00000502367 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
NFKB1-203ENST00000502367 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
NFKB1-203ENST00000502367 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
NFKB1-203ENST00000502367 THAP11Q96EK4 314 aa11.21□□□□□ -0.61
NFKB1-203ENST00000502367 SPSB2Q99619 263 aa11.21□□□□□ -0.61
NFKB1-203ENST00000502367 NDUFV2P19404 249 aa11.2□□□□□ -0.62
NFKB1-203ENST00000502367 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
NFKB1-203ENST00000502367 HOXA2O43364 376 aa11.19□□□□□ -0.62
NFKB1-203ENST00000502367 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
NFKB1-203ENST00000502367 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-203ENST00000502367 PRDM9Q9NQV7 894 aa11.19□□□□□ -0.62
NFKB1-203ENST00000502367 ADH1BP00325 375 aa11.18□□□□□ -0.62
NFKB1-203ENST00000502367 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
NFKB1-203ENST00000502367 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
NFKB1-203ENST00000502367 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
NFKB1-203ENST00000502367 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
NFKB1-203ENST00000502367 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
NFKB1-203ENST00000502367 FMNL1O95466 1100 aaPredicted RBP11.15□□□□□ -0.62
NFKB1-203ENST00000502367 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
NFKB1-203ENST00000502367 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
NFKB1-203ENST00000502367 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
NFKB1-203ENST00000502367 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
NFKB1-203ENST00000502367 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
NFKB1-203ENST00000502367 USP46P62068 366 aa11.12□□□□□ -0.63
NFKB1-203ENST00000502367 FDX1P10109 184 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms