RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
LMNA-218ENST00000502357 MYO5BQ9ULV0 1848 aa19.99■□□□□ 0.79
LMNA-218ENST00000502357 SLC52A1Q9NWF4 448 aa19.98■□□□□ 0.79
LMNA-218ENST00000502357 SLAIN2Q9P270 581 aa19.96■□□□□ 0.79
LMNA-218ENST00000502357 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.79
LMNA-218ENST00000502357 TMEM131LA2VDJ0 1609 aa19.95■□□□□ 0.78
LMNA-218ENST00000502357 RPRD2Q5VT52 1461 aaKnown RBP19.95■□□□□ 0.78
LMNA-218ENST00000502357 PHLPP1O60346 1717 aa19.95■□□□□ 0.78
LMNA-218ENST00000502357 COL16A1Q07092 1604 aaPredicted RBP19.94■□□□□ 0.78
LMNA-218ENST00000502357 SETD1AO15047 1707 aaKnown RBP19.93■□□□□ 0.78
LMNA-218ENST00000502357 MSH6P52701 1360 aa19.92■□□□□ 0.78
LMNA-218ENST00000502357 GCC2Q8IWJ2 1684 aa19.91■□□□□ 0.78
LMNA-218ENST00000502357 JCADQ9P266 1359 aa19.91■□□□□ 0.78
LMNA-218ENST00000502357 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
LMNA-218ENST00000502357 RIMS2Q9UQ26 1411 aa19.91■□□□□ 0.78
LMNA-218ENST00000502357 NCOA3Q9Y6Q9 1424 aa19.91■□□□□ 0.78
LMNA-218ENST00000502357 LRP6O75581 1613 aa19.91■□□□□ 0.78
LMNA-218ENST00000502357 TBX22Q9Y458 520 aa19.9■□□□□ 0.78
LMNA-218ENST00000502357 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
LMNA-218ENST00000502357 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
LMNA-218ENST00000502357 AHDC1Q5TGY3 1603 aaPredicted RBP19.84■□□□□ 0.77
LMNA-218ENST00000502357 UNC13BO14795 1591 aa19.84■□□□□ 0.77
LMNA-218ENST00000502357 E9PCH4 1651 aa19.84■□□□□ 0.77
LMNA-218ENST00000502357 PTPRUQ92729 1446 aa19.83■□□□□ 0.76
LMNA-218ENST00000502357 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
LMNA-218ENST00000502357 SHPRHQ149N8 1683 aa19.81■□□□□ 0.76
LMNA-218ENST00000502357 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
LMNA-218ENST00000502357 SPATA31A6Q5VVP1 1343 aa19.8■□□□□ 0.76
LMNA-218ENST00000502357 BCANQ96GW7 911 aa19.8■□□□□ 0.76
LMNA-218ENST00000502357 APLP2Q06481 763 aa19.79■□□□□ 0.76
LMNA-218ENST00000502357 C19orf44Q9H6X5 657 aa19.79■□□□□ 0.76
LMNA-218ENST00000502357 HDGFP51858 240 aaKnown RBP19.78■□□□□ 0.76
LMNA-218ENST00000502357 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
LMNA-218ENST00000502357 UPF1Q92900 1129 aaKnown RBP eCLIP19.78■□□□□ 0.76
LMNA-218ENST00000502357 NRXN3Q9Y4C0 1643 aa19.77■□□□□ 0.76
LMNA-218ENST00000502357 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
LMNA-218ENST00000502357 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
LMNA-218ENST00000502357 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
LMNA-218ENST00000502357 BRINP3Q76B58 766 aa19.75■□□□□ 0.75
LMNA-218ENST00000502357 CADPS2Q86UW7 1296 aa19.75■□□□□ 0.75
LMNA-218ENST00000502357 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
LMNA-218ENST00000502357 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
LMNA-218ENST00000502357 AMOTL2Q9Y2J4 779 aa19.73■□□□□ 0.75
LMNA-218ENST00000502357 TRPM2O94759 1503 aa19.72■□□□□ 0.75
LMNA-218ENST00000502357 ZNF772Q68DY9 489 aaPredicted RBP19.72■□□□□ 0.75
LMNA-218ENST00000502357 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
LMNA-218ENST00000502357 DCCP43146 1447 aa19.71■□□□□ 0.75
LMNA-218ENST00000502357 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
LMNA-218ENST00000502357 MST1RQ04912 1400 aa19.69■□□□□ 0.74
LMNA-218ENST00000502357 CHGAP10645 457 aaKnown RBP19.69■□□□□ 0.74
LMNA-218ENST00000502357 ATF3P18847 181 aa19.69■□□□□ 0.74
LMNA-218ENST00000502357 ASXL1Q8IXJ9 1541 aa19.69■□□□□ 0.74
LMNA-218ENST00000502357 SETBP1Q9Y6X0 1596 aa19.69■□□□□ 0.74
LMNA-218ENST00000502357 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
LMNA-218ENST00000502357 CDK12Q9NYV4 1490 aaPredicted RBP19.68■□□□□ 0.74
LMNA-218ENST00000502357 C14orf37Q86TY3 774 aa19.67■□□□□ 0.74
LMNA-218ENST00000502357 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
LMNA-218ENST00000502357 METP08581 1390 aa19.66■□□□□ 0.74
LMNA-218ENST00000502357 RXRBP28702 533 aa19.64■□□□□ 0.73
LMNA-218ENST00000502357 MEX3CQ5U5Q3 659 aaKnown RBP19.64■□□□□ 0.73
LMNA-218ENST00000502357 NUP155O75694 1391 aa19.64■□□□□ 0.73
LMNA-218ENST00000502357 AFF2P51816 1311 aa19.62■□□□□ 0.73
LMNA-218ENST00000502357 PNPLA6Q8IY17 1366 aa19.6■□□□□ 0.73
LMNA-218ENST00000502357 SPHKAPQ2M3C7 1700 aa19.6■□□□□ 0.73
LMNA-218ENST00000502357 NUTM2BA6NNL0 878 aaPredicted RBP19.6■□□□□ 0.73
LMNA-218ENST00000502357 NUTM2EB1AL46 878 aaPredicted RBP19.6■□□□□ 0.73
LMNA-218ENST00000502357 NUTM2AQ8IVF1 878 aaPredicted RBP19.6■□□□□ 0.73
LMNA-218ENST00000502357 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
LMNA-218ENST00000502357 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
LMNA-218ENST00000502357 NALCNQ8IZF0 1738 aa19.59■□□□□ 0.73
LMNA-218ENST00000502357 LAMC1P11047 1609 aa19.59■□□□□ 0.73
LMNA-218ENST00000502357 NEXMIFQ5QGS0 1516 aa19.59■□□□□ 0.73
LMNA-218ENST00000502357 RGS12O14924 1447 aa19.59■□□□□ 0.73
LMNA-218ENST00000502357 LRRC59Q96AG4 307 aaKnown RBP19.57■□□□□ 0.72
LMNA-218ENST00000502357 CLTCL1P53675 1640 aa19.55■□□□□ 0.72
LMNA-218ENST00000502357 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
LMNA-218ENST00000502357 QTRT2Q9H974 415 aaKnown RBP19.53■□□□□ 0.72
LMNA-218ENST00000502357 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
LMNA-218ENST00000502357 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
LMNA-218ENST00000502357 C8orf37Q96NL8 207 aa19.51■□□□□ 0.71
LMNA-218ENST00000502357 SOS2Q07890 1332 aaPredicted RBP19.51■□□□□ 0.71
LMNA-218ENST00000502357 PTCH1Q13635 1447 aa19.49■□□□□ 0.71
LMNA-218ENST00000502357 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
LMNA-218ENST00000502357 ORAI2Q96SN7 254 aa19.48■□□□□ 0.71
LMNA-218ENST00000502357 ZNF326Q5BKZ1 582 aaKnown RBP19.47■□□□□ 0.71
LMNA-218ENST00000502357 SRCAPQ6ZRS2 3230 aa19.46■□□□□ 0.71
LMNA-218ENST00000502357 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
LMNA-218ENST00000502357 ITGAEP38570 1179 aa19.45■□□□□ 0.7
LMNA-218ENST00000502357 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
LMNA-218ENST00000502357 KIF1BO60333 1816 aa19.44■□□□□ 0.7
LMNA-218ENST00000502357 ADAMTS2O95450 1211 aa19.42■□□□□ 0.7
LMNA-218ENST00000502357 ATRNO75882 1429 aa19.42■□□□□ 0.7
LMNA-218ENST00000502357 MYOM2P54296 1465 aa19.41■□□□□ 0.7
LMNA-218ENST00000502357 NGLY1Q96IV0 654 aa19.41■□□□□ 0.7
LMNA-218ENST00000502357 NAIPQ13075 1403 aa19.41■□□□□ 0.7
LMNA-218ENST00000502357 BCL9LQ86UU0 1499 aa19.39■□□□□ 0.69
LMNA-218ENST00000502357 PPLO60437 1756 aa19.38■□□□□ 0.69
LMNA-218ENST00000502357 PXDNQ92626 1479 aa19.38■□□□□ 0.69
LMNA-218ENST00000502357 USP21Q9UK80 565 aa19.38■□□□□ 0.69
LMNA-218ENST00000502357 EP400Q96L91 3159 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms