RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 E9PCH4 1651 aa25.64■■□□□ 1.69
CDKN2A-209ENST00000498628 RIMS2Q9UQ26 1411 aa25.63■■□□□ 1.69
CDKN2A-209ENST00000498628 HSPA1LP34931 641 aa25.62■■□□□ 1.69
CDKN2A-209ENST00000498628 PLEKHG1Q9ULL1 1385 aa25.61■■□□□ 1.69
CDKN2A-209ENST00000498628 TMEM131LA2VDJ0 1609 aa25.6■■□□□ 1.69
CDKN2A-209ENST00000498628 PROSER2Q86WR7 435 aaPredicted RBP25.6■■□□□ 1.69
CDKN2A-209ENST00000498628 ZFYVE9O95405 1425 aa25.59■■□□□ 1.69
CDKN2A-209ENST00000498628 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
CDKN2A-209ENST00000498628 NAIPQ13075 1403 aa25.55■■□□□ 1.68
CDKN2A-209ENST00000498628 TRIM52Q96A61 297 aa25.54■■□□□ 1.68
CDKN2A-209ENST00000498628 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
CDKN2A-209ENST00000498628 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
CDKN2A-209ENST00000498628 MYO5BQ9ULV0 1848 aa25.53■■□□□ 1.68
CDKN2A-209ENST00000498628 NKTRP30414 1462 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-209ENST00000498628 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-209ENST00000498628 NUTM2DQ5VT03 806 aaPredicted RBP25.5■■□□□ 1.67
CDKN2A-209ENST00000498628 ALKQ9UM73 1620 aa25.49■■□□□ 1.67
CDKN2A-209ENST00000498628 HFM1A2PYH4 1435 aa25.49■■□□□ 1.67
CDKN2A-209ENST00000498628 NWD1Q149M9 1564 aa25.47■■□□□ 1.67
CDKN2A-209ENST00000498628 SPHKAPQ2M3C7 1700 aa25.46■■□□□ 1.67
CDKN2A-209ENST00000498628 MSH6P52701 1360 aa25.46■■□□□ 1.67
CDKN2A-209ENST00000498628 PIK3R4Q99570 1358 aa25.45■■□□□ 1.67
CDKN2A-209ENST00000498628 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
CDKN2A-209ENST00000498628 XIRP1Q702N8 1843 aaKnown RBP25.44■■□□□ 1.66
CDKN2A-209ENST00000498628 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
CDKN2A-209ENST00000498628 RBM33Q96EV2 1170 aaKnown RBP25.43■■□□□ 1.66
CDKN2A-209ENST00000498628 FAM135BQ49AJ0 1406 aa25.43■■□□□ 1.66
CDKN2A-209ENST00000498628 ILDR2Q71H61 639 aa25.42■■□□□ 1.66
CDKN2A-209ENST00000498628 NCOA3Q9Y6Q9 1424 aa25.41■■□□□ 1.66
CDKN2A-209ENST00000498628 C14orf37Q86TY3 774 aa25.41■■□□□ 1.66
CDKN2A-209ENST00000498628 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
CDKN2A-209ENST00000498628 ADAMTS13Q76LX8 1427 aa25.4■■□□□ 1.66
CDKN2A-209ENST00000498628 ACIN1Q9UKV3 1341 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-209ENST00000498628 TRPM2O94759 1503 aa25.38■■□□□ 1.65
CDKN2A-209ENST00000498628 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
CDKN2A-209ENST00000498628 SLAIN2Q9P270 581 aa25.36■■□□□ 1.65
CDKN2A-209ENST00000498628 AMOTL2Q9Y2J4 779 aa25.36■■□□□ 1.65
CDKN2A-209ENST00000498628 MED1Q15648 1581 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-209ENST00000498628 SOCS7O14512 581 aa25.33■■□□□ 1.65
CDKN2A-209ENST00000498628 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
CDKN2A-209ENST00000498628 ATF3P18847 181 aa25.32■■□□□ 1.64
CDKN2A-209ENST00000498628 CADPS2Q86UW7 1296 aa25.32■■□□□ 1.64
CDKN2A-209ENST00000498628 C19orf44Q9H6X5 657 aa25.32■■□□□ 1.64
CDKN2A-209ENST00000498628 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
CDKN2A-209ENST00000498628 KIF1BO60333 1816 aa25.31■■□□□ 1.64
CDKN2A-209ENST00000498628 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
CDKN2A-209ENST00000498628 SETBP1Q9Y6X0 1596 aa25.3■■□□□ 1.64
CDKN2A-209ENST00000498628 ROBO1Q9Y6N7 1651 aa25.26■■□□□ 1.63
CDKN2A-209ENST00000498628 NEXMIFQ5QGS0 1516 aa25.26■■□□□ 1.63
CDKN2A-209ENST00000498628 MPHOSPH9Q99550 1183 aa25.25■■□□□ 1.63
CDKN2A-209ENST00000498628 PTPRUQ92729 1446 aa25.24■■□□□ 1.63
CDKN2A-209ENST00000498628 METP08581 1390 aa25.21■■□□□ 1.63
CDKN2A-209ENST00000498628 NRXN3Q9Y4C0 1643 aa25.21■■□□□ 1.63
CDKN2A-209ENST00000498628 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.63
CDKN2A-209ENST00000498628 FOXD1Q16676 465 aa25.2■■□□□ 1.62
CDKN2A-209ENST00000498628 SETD5Q9C0A6 1442 aa25.19■■□□□ 1.62
CDKN2A-209ENST00000498628 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
CDKN2A-209ENST00000498628 DCCP43146 1447 aa25.17■■□□□ 1.62
CDKN2A-209ENST00000498628 XRN1Q8IZH2 1706 aaKnown RBP25.16■■□□□ 1.62
CDKN2A-209ENST00000498628 JCADQ9P266 1359 aa25.14■■□□□ 1.61
CDKN2A-209ENST00000498628 PHLPP1O60346 1717 aa25.13■■□□□ 1.61
CDKN2A-209ENST00000498628 RGL3Q3MIN7 710 aa25.13■■□□□ 1.61
CDKN2A-209ENST00000498628 ANKRD30BQ9BXX2 1392 aa25.09■■□□□ 1.61
CDKN2A-209ENST00000498628 BRINP3Q76B58 766 aa25.08■■□□□ 1.61
CDKN2A-209ENST00000498628 ADGRL3Q9HAR2 1447 aa25.08■■□□□ 1.61
CDKN2A-209ENST00000498628 PPLO60437 1756 aa25.07■■□□□ 1.6
CDKN2A-209ENST00000498628 PTCH1Q13635 1447 aa25.06■■□□□ 1.6
CDKN2A-209ENST00000498628 SPATA31A6Q5VVP1 1343 aa25.05■■□□□ 1.6
CDKN2A-209ENST00000498628 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
CDKN2A-209ENST00000498628 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
CDKN2A-209ENST00000498628 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
CDKN2A-209ENST00000498628 MST1RQ04912 1400 aa25.03■■□□□ 1.6
CDKN2A-209ENST00000498628 ADGRF5Q8IZF2 1346 aa25.03■■□□□ 1.6
CDKN2A-209ENST00000498628 COL16A1Q07092 1604 aaPredicted RBP25.02■■□□□ 1.6
CDKN2A-209ENST00000498628 RGS17Q9UGC6 210 aaPredicted RBP25.01■■□□□ 1.59
CDKN2A-209ENST00000498628 ROBO2Q9HCK4 1378 aa25.01■■□□□ 1.59
CDKN2A-209ENST00000498628 PRAG1Q86YV5 1406 aa25.01■■□□□ 1.59
CDKN2A-209ENST00000498628 MEX3CQ5U5Q3 659 aaKnown RBP25■■□□□ 1.59
CDKN2A-209ENST00000498628 SETD1AO15047 1707 aaKnown RBP24.99■■□□□ 1.59
CDKN2A-209ENST00000498628 HRCP23327 699 aa24.99■■□□□ 1.59
CDKN2A-209ENST00000498628 LRRC59Q96AG4 307 aaKnown RBP24.99■■□□□ 1.59
CDKN2A-209ENST00000498628 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
CDKN2A-209ENST00000498628 STK26Q9P289 416 aa24.96■■□□□ 1.59
CDKN2A-209ENST00000498628 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.58
CDKN2A-209ENST00000498628 C1orf167Q5SNV9 1468 aa24.94■■□□□ 1.58
CDKN2A-209ENST00000498628 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
CDKN2A-209ENST00000498628 PIK3C2GO75747 1445 aa24.92■■□□□ 1.58
CDKN2A-209ENST00000498628 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
CDKN2A-209ENST00000498628 POTEAQ6S8J7 498 aa24.91■■□□□ 1.58
CDKN2A-209ENST00000498628 ABCC11Q96J66 1382 aa24.91■■□□□ 1.58
CDKN2A-209ENST00000498628 SHPRHQ149N8 1683 aa24.91■■□□□ 1.58
CDKN2A-209ENST00000498628 ZNF772Q68DY9 489 aaPredicted RBP24.9■■□□□ 1.58
CDKN2A-209ENST00000498628 TMEM132EQ6IEE7 984 aa24.9■■□□□ 1.58
CDKN2A-209ENST00000498628 C14orf93Q9H972 538 aaKnown RBP24.9■■□□□ 1.58
CDKN2A-209ENST00000498628 NUTM2BA6NNL0 878 aaPredicted RBP24.89■■□□□ 1.58
CDKN2A-209ENST00000498628 NUTM2EB1AL46 878 aaPredicted RBP24.89■■□□□ 1.58
CDKN2A-209ENST00000498628 NUTM2AQ8IVF1 878 aaPredicted RBP24.89■■□□□ 1.58
CDKN2A-209ENST00000498628 TECPR2O15040 1411 aa24.88■■□□□ 1.57
CDKN2A-209ENST00000498628 NHSL1Q5SYE7 1610 aa24.88■■□□□ 1.57
CDKN2A-209ENST00000498628 SIRT1Q96EB6 747 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms