RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	IQGAP2	Q13576	1575 aa		11.29	□□□□□ -0.6
HM13-224	ENST00000498035	GORAB	Q5T7V8	394 aa		11.29	□□□□□ -0.6
HM13-224	ENST00000498035	ZNF830	Q96NB3	372 aa	Predicted RBP	11.29	□□□□□ -0.6
HM13-224	ENST00000498035	EPRS	P07814	1512 aa	Known RBP	11.28	□□□□□ -0.6
HM13-224	ENST00000498035	POLD1	P28340	1107 aa		11.28	□□□□□ -0.6
HM13-224	ENST00000498035	PRG4	Q92954	1404 aa	Predicted RBP	11.28	□□□□□ -0.6
HM13-224	ENST00000498035	CDK13	Q14004	1512 aa	Known RBP	11.28	□□□□□ -0.6
HM13-224	ENST00000498035	TPD52L2	O43399	206 aa	Known RBP	11.28	□□□□□ -0.6
HM13-224	ENST00000498035	DNAJC5	Q9H3Z4	198 aa		11.28	□□□□□ -0.6
HM13-224	ENST00000498035	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.27	□□□□□ -0.6
HM13-224	ENST00000498035	RGS3	P49796	1198 aa		11.27	□□□□□ -0.6
HM13-224	ENST00000498035	HFM1	A2PYH4	1435 aa		11.27	□□□□□ -0.61
HM13-224	ENST00000498035	SPAG9	O60271	1321 aa	Known RBP	11.26	□□□□□ -0.61
HM13-224	ENST00000498035	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.26	□□□□□ -0.61
HM13-224	ENST00000498035	MIA2	Q96PC5	1412 aa		11.26	□□□□□ -0.61
HM13-224	ENST00000498035	HECW1	Q76N89	1606 aa		11.26	□□□□□ -0.61
HM13-224	ENST00000498035	TRO	Q12816	1431 aa	Predicted RBP	11.25	□□□□□ -0.61
HM13-224	ENST00000498035	KANK1	Q14678	1352 aa		11.25	□□□□□ -0.61
HM13-224	ENST00000498035	KIF3B	O15066	747 aa		11.25	□□□□□ -0.61
HM13-224	ENST00000498035	FOXD4	Q12950	439 aa	Predicted RBP	11.25	□□□□□ -0.61
HM13-224	ENST00000498035	WDR43	Q15061	677 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
HM13-224	ENST00000498035	GGT6	Q6P531	493 aa		11.25	□□□□□ -0.61
HM13-224	ENST00000498035	RETREG2	Q8NC44	543 aa		11.25	□□□□□ -0.61
HM13-224	ENST00000498035	PPME1	Q9Y570	386 aa		11.25	□□□□□ -0.61
HM13-224	ENST00000498035	GRIN2A	Q12879	1464 aa		11.24	□□□□□ -0.61
HM13-224	ENST00000498035	ANKRD13A	Q8IZ07	590 aa		11.24	□□□□□ -0.61
HM13-224	ENST00000498035	TERF2IP	Q9NYB0	399 aa		11.24	□□□□□ -0.61
HM13-224	ENST00000498035	VGLL3	A8MV65	326 aa		11.24	□□□□□ -0.61
HM13-224	ENST00000498035	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.24	□□□□□ -0.61
HM13-224	ENST00000498035	RINL	Q6ZS11	566 aa		11.24	□□□□□ -0.61
HM13-224	ENST00000498035	RGL2	O15211	777 aa		11.23	□□□□□ -0.61
HM13-224	ENST00000498035	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.23	□□□□□ -0.61
HM13-224	ENST00000498035	NAIP	Q13075	1403 aa		11.23	□□□□□ -0.61
HM13-224	ENST00000498035	KNSTRN	Q9Y448	316 aa		11.23	□□□□□ -0.61
HM13-224	ENST00000498035	ANKRD62	A6NC57	917 aa		11.23	□□□□□ -0.61
HM13-224	ENST00000498035	VASP	P50552	380 aa	Predicted RBP	11.23	□□□□□ -0.61
HM13-224	ENST00000498035	ROCK2	O75116	1388 aa	Known RBP	11.23	□□□□□ -0.61
HM13-224	ENST00000498035	ANKRD50	Q9ULJ7	1429 aa		11.22	□□□□□ -0.61
HM13-224	ENST00000498035	KIF15	Q9NS87	1388 aa		11.22	□□□□□ -0.61
HM13-224	ENST00000498035	CC2D1B	Q5T0F9	858 aa	Known RBP	11.22	□□□□□ -0.61
HM13-224	ENST00000498035	SYNJ2	O15056	1496 aa		11.22	□□□□□ -0.61
HM13-224	ENST00000498035	KAT6B	Q8WYB5	2073 aa		11.22	□□□□□ -0.61
HM13-224	ENST00000498035	TMF1	P82094	1093 aa		11.22	□□□□□ -0.61
HM13-224	ENST00000498035	IRF5	Q13568	498 aa		11.21	□□□□□ -0.61
HM13-224	ENST00000498035	CLUAP1	Q96AJ1	413 aa		11.21	□□□□□ -0.61
HM13-224	ENST00000498035	PLB1	Q6P1J6	1458 aa		11.21	□□□□□ -0.62
HM13-224	ENST00000498035	TRAIP	Q9BWF2	469 aa		11.21	□□□□□ -0.62
HM13-224	ENST00000498035	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.2	□□□□□ -0.62
HM13-224	ENST00000498035	SH3BP1	Q9Y3L3	701 aa		11.2	□□□□□ -0.62
HM13-224	ENST00000498035	SLC52A1	Q9NWF4	448 aa		11.19	□□□□□ -0.62
HM13-224	ENST00000498035	OSCAR	Q8IYS5	282 aa		11.19	□□□□□ -0.62
HM13-224	ENST00000498035	EVI5L	Q96CN4	794 aa		11.19	□□□□□ -0.62
HM13-224	ENST00000498035	ST20-MTHFS	A0A0A6YYL1	179 aa		11.19	□□□□□ -0.62
HM13-224	ENST00000498035	MICAL1	Q8TDZ2	1067 aa		11.19	□□□□□ -0.62
HM13-224	ENST00000498035	CCDC144A	A2RUR9	1427 aa		11.19	□□□□□ -0.62
HM13-224	ENST00000498035	RALBP1	Q15311	655 aa		11.18	□□□□□ -0.62
HM13-224	ENST00000498035	DAPK1	P53355	1430 aa		11.18	□□□□□ -0.62
HM13-224	ENST00000498035	ANP32B	Q92688	251 aa	Known RBP	11.18	□□□□□ -0.62
HM13-224	ENST00000498035	TMX4	Q9H1E5	349 aa	Predicted RBP	11.18	□□□□□ -0.62
HM13-224	ENST00000498035	KIF21A	Q7Z4S6	1674 aa		11.17	□□□□□ -0.62
HM13-224	ENST00000498035	RIOK3	O14730	519 aa	Known RBP	11.16	□□□□□ -0.62
HM13-224	ENST00000498035	ARID4A	P29374	1257 aa	Predicted RBP	11.16	□□□□□ -0.62
HM13-224	ENST00000498035	CASC1	Q6TDU7	716 aa		11.16	□□□□□ -0.62
HM13-224	ENST00000498035	SEMA3F	Q13275	785 aa		11.16	□□□□□ -0.62
HM13-224	ENST00000498035	CREBRF	Q8IUR6	639 aa		11.16	□□□□□ -0.62
HM13-224	ENST00000498035	PNMA2	Q9UL42	364 aa		11.16	□□□□□ -0.62
HM13-224	ENST00000498035	USP47	Q96K76	1375 aa		11.15	□□□□□ -0.62
HM13-224	ENST00000498035	KIF4A	O95239	1232 aa		11.15	□□□□□ -0.62
HM13-224	ENST00000498035	PTPN23	Q9H3S7	1636 aa		11.15	□□□□□ -0.62
HM13-224	ENST00000498035	AFAP1	Q8N556	730 aa		11.15	□□□□□ -0.63
HM13-224	ENST00000498035	TTC36	A6NLP5	189 aa		11.14	□□□□□ -0.63
HM13-224	ENST00000498035	ZNF662	Q6ZS27	426 aa		11.14	□□□□□ -0.63
HM13-224	ENST00000498035	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.14	□□□□□ -0.63
HM13-224	ENST00000498035	CTTNBP2	Q8WZ74	1663 aa		11.14	□□□□□ -0.63
HM13-224	ENST00000498035	C9orf84	Q5VXU9	1444 aa		11.14	□□□□□ -0.63
HM13-224	ENST00000498035	PTPRK	Q15262	1439 aa		11.13	□□□□□ -0.63
HM13-224	ENST00000498035	WASHC2A	Q641Q2	1341 aa		11.13	□□□□□ -0.63
HM13-224	ENST00000498035	MLEC	Q14165	292 aa		11.13	□□□□□ -0.63
HM13-224	ENST00000498035	NBPF8	Q3BBV2	869 aa		11.13	□□□□□ -0.63
HM13-224	ENST00000498035	ARHGAP5	Q13017	1502 aa		11.12	□□□□□ -0.63
HM13-224	ENST00000498035	SPATA32	Q96LK8	384 aa		11.12	□□□□□ -0.63
HM13-224	ENST00000498035	ABCC5	O15440	1437 aa		11.12	□□□□□ -0.63
HM13-224	ENST00000498035	UNCX	A6NJT0	531 aa		11.12	□□□□□ -0.63
HM13-224	ENST00000498035	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.12	□□□□□ -0.63
HM13-224	ENST00000498035	THOC2	Q8NI27	1593 aa	Known RBP	11.12	□□□□□ -0.63
HM13-224	ENST00000498035	ROCK1	Q13464	1354 aa		11.12	□□□□□ -0.63
HM13-224	ENST00000498035	CYB5RL	Q6IPT4	315 aa		11.11	□□□□□ -0.63
HM13-224	ENST00000498035	SUGT1	Q9Y2Z0	365 aa		11.11	□□□□□ -0.63
HM13-224	ENST00000498035	ARHGEF11	O15085	1522 aa		11.11	□□□□□ -0.63
HM13-224	ENST00000498035	DHX16	O60231	1041 aa	Known RBP	11.11	□□□□□ -0.63
HM13-224	ENST00000498035	NBPF1	Q3BBV0	1214 aa		11.11	□□□□□ -0.63
HM13-224	ENST00000498035	KIF7	Q2M1P5	1343 aa		11.11	□□□□□ -0.63
HM13-224	ENST00000498035	WASHC2C	Q9Y4E1	1318 aa		11.11	□□□□□ -0.63
HM13-224	ENST00000498035	MAP4K4	O95819	1239 aa	Predicted RBP	11.1	□□□□□ -0.63
HM13-224	ENST00000498035	TNNT2	P45379	298 aa	Predicted RBP	11.1	□□□□□ -0.63
HM13-224	ENST00000498035	NBPF11	Q86T75	865 aa		11.1	□□□□□ -0.63
HM13-224	ENST00000498035	KTN1	Q86UP2	1357 aa	Known RBP	11.1	□□□□□ -0.63
HM13-224	ENST00000498035	RAB11FIP3	O75154	756 aa		11.1	□□□□□ -0.63
HM13-224	ENST00000498035	ADAMTS12	P58397	1594 aa		11.1	□□□□□ -0.63
HM13-224	ENST00000498035	TSHZ1	Q6ZSZ6	1077 aa		11.1	□□□□□ -0.63

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