RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 TSPAN18Q96SJ8 248 aa6.43□□□□□ -1.38
CUL3-212ENST00000497715 RBM27Q9P2N5 1060 aaKnown RBP6.43□□□□□ -1.38
CUL3-212ENST00000497715 CCT2P78371 535 aaKnown RBP6.42□□□□□ -1.38
CUL3-212ENST00000497715 PEX14O75381 377 aa6.42□□□□□ -1.38
CUL3-212ENST00000497715 LETM1O95202 739 aaPredicted RBP6.42□□□□□ -1.38
CUL3-212ENST00000497715 MTA1Q13330 715 aa6.42□□□□□ -1.38
CUL3-212ENST00000497715 ANKRD23Q86SG2 305 aa6.42□□□□□ -1.38
CUL3-212ENST00000497715 GZF1Q9H116 711 aaPredicted RBP6.42□□□□□ -1.38
CUL3-212ENST00000497715 RAI14Q9P0K7 980 aa6.42□□□□□ -1.38
CUL3-212ENST00000497715 TRIM6-TRIM34B2RNG4 842 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 TMCO4Q5TGY1 634 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 MTA3Q9BTC8 594 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 FAM13BQ9NYF5 915 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 CEP83Q9Y592 693 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 TNNT1P13805 278 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 ANP32AP39687 249 aaKnown RBP6.41□□□□□ -1.38
CUL3-212ENST00000497715 KCNJ4P48050 445 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 PPME1Q9Y570 386 aa6.41□□□□□ -1.38
CUL3-212ENST00000497715 TPD52L2O43399 206 aaKnown RBP6.4□□□□□ -1.38
CUL3-212ENST00000497715 RIPK4P57078 832 aa6.4□□□□□ -1.38
CUL3-212ENST00000497715 DNAJC21Q5F1R6 531 aaKnown RBP6.4□□□□□ -1.38
CUL3-212ENST00000497715 CCDC97Q96F63 343 aaPredicted RBP6.4□□□□□ -1.38
CUL3-212ENST00000497715 SUGT1Q9Y2Z0 365 aa6.4□□□□□ -1.38
CUL3-212ENST00000497715 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.38
CUL3-212ENST00000497715 KAT6BQ8WYB5 2073 aa6.4□□□□□ -1.38
CUL3-212ENST00000497715 KIF4AO95239 1232 aa6.4□□□□□ -1.39
CUL3-212ENST00000497715 RBM5P52756 815 aaKnown RBP eCLIP6.4□□□□□ -1.39
CUL3-212ENST00000497715 FOSBP53539 338 aa6.4□□□□□ -1.39
CUL3-212ENST00000497715 C1QTNF12Q5T7M4 302 aa6.4□□□□□ -1.39
CUL3-212ENST00000497715 MICALL1Q8N3F8 863 aa6.4□□□□□ -1.39
CUL3-212ENST00000497715 KCNV2Q8TDN2 545 aa6.4□□□□□ -1.39
CUL3-212ENST00000497715 ZNF280DQ6N043 979 aa6.39□□□□□ -1.39
CUL3-212ENST00000497715 SDR16C5Q8N3Y7 309 aa6.39□□□□□ -1.39
CUL3-212ENST00000497715 GTPBP4Q9BZE4 634 aaKnown RBP6.39□□□□□ -1.39
CUL3-212ENST00000497715 PNMA2Q9UL42 364 aa6.39□□□□□ -1.39
CUL3-212ENST00000497715 MPHOSPH10O00566 681 aaKnown RBP6.39□□□□□ -1.39
CUL3-212ENST00000497715 RIOK3O14730 519 aaKnown RBP6.39□□□□□ -1.39
CUL3-212ENST00000497715 SSR1P43307 286 aaKnown RBP6.39□□□□□ -1.39
CUL3-212ENST00000497715 MAP7D2Q96T17 732 aa6.39□□□□□ -1.39
CUL3-212ENST00000497715 EPB41L2O43491 1005 aaKnown RBP6.38□□□□□ -1.39
CUL3-212ENST00000497715 PPFIA4O75335 1185 aa6.38□□□□□ -1.39
CUL3-212ENST00000497715 TDO2P48775 406 aa6.38□□□□□ -1.39
CUL3-212ENST00000497715 ZKSCAN8Q15776 578 aaPredicted RBP6.38□□□□□ -1.39
CUL3-212ENST00000497715 ZC3H12AQ5D1E8 599 aaKnown RBP6.38□□□□□ -1.39
CUL3-212ENST00000497715 MFSD4BQ5TF39 518 aa6.38□□□□□ -1.39
CUL3-212ENST00000497715 CCDC82Q8N4S0 544 aa6.38□□□□□ -1.39
CUL3-212ENST00000497715 ZNF662Q6ZS27 426 aa6.38□□□□□ -1.39
CUL3-212ENST00000497715 CCDC94Q9BW85 323 aaPredicted RBP6.38□□□□□ -1.39
CUL3-212ENST00000497715 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
CUL3-212ENST00000497715 CCDC172P0C7W6 258 aa6.37□□□□□ -1.39
CUL3-212ENST00000497715 FXR2P51116 673 aaKnown RBP eCLIP6.37□□□□□ -1.39
CUL3-212ENST00000497715 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
CUL3-212ENST00000497715 PAX3P23760 479 aa6.36□□□□□ -1.39
CUL3-212ENST00000497715 KDM4CQ9H3R0 1056 aa6.36□□□□□ -1.39
CUL3-212ENST00000497715 MYH16Q9H6N6 1097 aa6.36□□□□□ -1.39
CUL3-212ENST00000497715 HDAC1Q13547 482 aaPredicted RBP6.36□□□□□ -1.39
CUL3-212ENST00000497715 IRF5Q13568 498 aa6.36□□□□□ -1.39
CUL3-212ENST00000497715 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
CUL3-212ENST00000497715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.39
CUL3-212ENST00000497715 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
CUL3-212ENST00000497715 EVX2Q03828 476 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 NFKBIBQ15653 356 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 NEUROD2Q15784 382 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 KRBA2Q6ZNG9 492 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 CADPS2Q86UW7 1296 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 REM2Q8IYK8 340 aaPredicted RBP6.35□□□□□ -1.39
CUL3-212ENST00000497715 ITFG2Q969R8 447 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 IGF1RP08069 1367 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 BIRC2Q13490 618 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 POLA2Q14181 598 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 MSL3Q8N5Y2 521 aaKnown RBP6.35□□□□□ -1.39
CUL3-212ENST00000497715 ACRBPQ8NEB7 543 aa6.35□□□□□ -1.39
CUL3-212ENST00000497715 NAT1P18440 290 aa6.34□□□□□ -1.39
CUL3-212ENST00000497715 ZKSCAN2Q63HK3 967 aa6.34□□□□□ -1.39
CUL3-212ENST00000497715 MYCBPQ99417 103 aaPredicted RBP6.34□□□□□ -1.39
CUL3-212ENST00000497715 KCNH8Q96L42 1107 aa6.34□□□□□ -1.4
CUL3-212ENST00000497715 RPGRIP1LQ68CZ1 1315 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 SMC4Q9NTJ3 1288 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 SMC3Q9UQE7 1217 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
CUL3-212ENST00000497715 UNCXA6NJT0 531 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 CSB-PGBD3P0DP91 1061 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 PAX7P23759 505 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 CSPP1Q1MSJ5 1256 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 MICAL1Q8TDZ2 1067 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 VTI1AQ96AJ9 217 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 FAM212AQ96EL1 285 aa6.33□□□□□ -1.4
CUL3-212ENST00000497715 BSDC1Q9NW68 430 aaPredicted RBP6.33□□□□□ -1.4
CUL3-212ENST00000497715 MAMSTRQ6ZN01 415 aa6.32□□□□□ -1.4
CUL3-212ENST00000497715 CBX1P83916 185 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 NEXNQ0ZGT2 675 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 CCDC189A1A4V9 331 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 ERICH4A6NGS2 130 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 ESPNB1AK53 854 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 NRDCO43847 1150 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 COQ9O75208 318 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 ZNF853P0CG23 659 aa6.31□□□□□ -1.4
CUL3-212ENST00000497715 ZRSR2Q15696 482 aaKnown RBP6.31□□□□□ -1.4
CUL3-212ENST00000497715 NCAPGQ9BPX3 1015 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms