RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
PHC3-216ENST00000497171 EYA1Q99502 592 aa9.42□□□□□ -0.9
PHC3-216ENST00000497171 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
PHC3-216ENST00000497171 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
PHC3-216ENST00000497171 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
PHC3-216ENST00000497171 ZNF598Q86UK7 904 aaKnown RBP9.4□□□□□ -0.9
PHC3-216ENST00000497171 PRR20EP86478 221 aa9.39□□□□□ -0.91
PHC3-216ENST00000497171 PRR20CP86479 221 aa9.39□□□□□ -0.91
PHC3-216ENST00000497171 PRR20DP86480 221 aa9.39□□□□□ -0.91
PHC3-216ENST00000497171 PRR20BP86481 221 aa9.39□□□□□ -0.91
PHC3-216ENST00000497171 PRR20AP86496 221 aa9.39□□□□□ -0.91
PHC3-216ENST00000497171 TLL1O43897 1013 aa9.38□□□□□ -0.91
PHC3-216ENST00000497171 ZNF697Q5TEC3 545 aa9.38□□□□□ -0.91
PHC3-216ENST00000497171 FAM187AA6NFU0 413 aa9.37□□□□□ -0.91
PHC3-216ENST00000497171 MYT1Q01538 1121 aa9.37□□□□□ -0.91
PHC3-216ENST00000497171 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
PHC3-216ENST00000497171 ACTN4O43707 911 aaKnown RBP9.36□□□□□ -0.91
PHC3-216ENST00000497171 NR1I2O75469 434 aa9.36□□□□□ -0.91
PHC3-216ENST00000497171 S1PR4O95977 384 aa9.36□□□□□ -0.91
PHC3-216ENST00000497171 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
PHC3-216ENST00000497171 CFHP08603 1231 aa9.35□□□□□ -0.91
PHC3-216ENST00000497171 ADH1BP00325 375 aa9.34□□□□□ -0.91
PHC3-216ENST00000497171 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
PHC3-216ENST00000497171 RSPH4AQ5TD94 716 aa9.32□□□□□ -0.92
PHC3-216ENST00000497171 SLC6A16Q9GZN6 736 aa9.32□□□□□ -0.92
PHC3-216ENST00000497171 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
PHC3-216ENST00000497171 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
PHC3-216ENST00000497171 PTGDRQ13258 359 aa9.31□□□□□ -0.92
PHC3-216ENST00000497171 NUTM2FA1L443 756 aa9.3□□□□□ -0.92
PHC3-216ENST00000497171 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
PHC3-216ENST00000497171 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
PHC3-216ENST00000497171 ADGRG1Q9Y653 693 aa9.3□□□□□ -0.92
PHC3-216ENST00000497171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
PHC3-216ENST00000497171 LMOD2Q6P5Q4 547 aa9.29□□□□□ -0.92
PHC3-216ENST00000497171 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
PHC3-216ENST00000497171 GDF9O60383 454 aa9.27□□□□□ -0.93
PHC3-216ENST00000497171 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
PHC3-216ENST00000497171 FCHSD2O94868 740 aa9.25□□□□□ -0.93
PHC3-216ENST00000497171 POTECB2RU33 542 aa9.24□□□□□ -0.93
PHC3-216ENST00000497171 OATP04181 439 aa9.24□□□□□ -0.93
PHC3-216ENST00000497171 FOXC1Q12948 553 aa9.24□□□□□ -0.93
PHC3-216ENST00000497171 SPSB2Q99619 263 aa9.24□□□□□ -0.93
PHC3-216ENST00000497171 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
PHC3-216ENST00000497171 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
PHC3-216ENST00000497171 SCUBE3Q8IX30 993 aa9.23□□□□□ -0.93
PHC3-216ENST00000497171 AAASQ9NRG9 546 aa9.23□□□□□ -0.93
PHC3-216ENST00000497171 FAM161AQ3B820 660 aa9.22□□□□□ -0.93
PHC3-216ENST00000497171 TREML4Q6UXN2 200 aa9.22□□□□□ -0.93
PHC3-216ENST00000497171 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
PHC3-216ENST00000497171 SLC10A3P09131 477 aa9.21□□□□□ -0.94
PHC3-216ENST00000497171 RPIAP49247 311 aa9.21□□□□□ -0.94
PHC3-216ENST00000497171 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
PHC3-216ENST00000497171 PLA2G2CQ5R387 149 aa9.19□□□□□ -0.94
PHC3-216ENST00000497171 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
PHC3-216ENST00000497171 AXIN1O15169 862 aa9.18□□□□□ -0.94
PHC3-216ENST00000497171 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
PHC3-216ENST00000497171 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
PHC3-216ENST00000497171 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
PHC3-216ENST00000497171 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
PHC3-216ENST00000497171 RDH13Q8NBN7 331 aa9.17□□□□□ -0.94
PHC3-216ENST00000497171 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
PHC3-216ENST00000497171 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
PHC3-216ENST00000497171 FCF1Q9Y324 198 aaKnown RBP9.16□□□□□ -0.94
PHC3-216ENST00000497171 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
PHC3-216ENST00000497171 ZBTB24O43167 697 aaPredicted RBP9.15□□□□□ -0.94
PHC3-216ENST00000497171 HIC1Q14526 733 aa9.15□□□□□ -0.94
PHC3-216ENST00000497171 WFS1O76024 890 aa9.14□□□□□ -0.95
PHC3-216ENST00000497171 FMNL1O95466 1100 aaPredicted RBP9.14□□□□□ -0.95
PHC3-216ENST00000497171 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
PHC3-216ENST00000497171 AVPP01185 164 aa9.13□□□□□ -0.95
PHC3-216ENST00000497171 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
PHC3-216ENST00000497171 TOR4AQ9NXH8 423 aa9.12□□□□□ -0.95
PHC3-216ENST00000497171 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
PHC3-216ENST00000497171 MORN1Q5T089 497 aa9.11□□□□□ -0.95
PHC3-216ENST00000497171 SULF1Q8IWU6 871 aa9.11□□□□□ -0.95
PHC3-216ENST00000497171 GMPR2Q9P2T1 348 aaKnown RBP9.11□□□□□ -0.95
PHC3-216ENST00000497171 INSM1Q01101 510 aaPredicted RBP9.1□□□□□ -0.95
PHC3-216ENST00000497171 DAXXQ9UER7 740 aaPredicted RBP9.1□□□□□ -0.95
PHC3-216ENST00000497171 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
PHC3-216ENST00000497171 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
PHC3-216ENST00000497171 FUT2Q10981 343 aa9.09□□□□□ -0.95
PHC3-216ENST00000497171 GRIPAP1Q4V328 841 aa9.09□□□□□ -0.95
PHC3-216ENST00000497171 SMYD5Q6GMV2 418 aa9.09□□□□□ -0.95
PHC3-216ENST00000497171 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
PHC3-216ENST00000497171 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
PHC3-216ENST00000497171 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
PHC3-216ENST00000497171 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
PHC3-216ENST00000497171 SALL2Q9Y467 1007 aaPredicted RBP9.07□□□□□ -0.96
PHC3-216ENST00000497171 THAP11Q96EK4 314 aa9.06□□□□□ -0.96
PHC3-216ENST00000497171 SLC27A5Q9Y2P5 690 aa9.06□□□□□ -0.96
PHC3-216ENST00000497171 SEMA3EO15041 775 aa9.05□□□□□ -0.96
PHC3-216ENST00000497171 GNPATO15228 680 aa9.05□□□□□ -0.96
PHC3-216ENST00000497171 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
PHC3-216ENST00000497171 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
PHC3-216ENST00000497171 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
PHC3-216ENST00000497171 WNT7AO00755 349 aa9.03□□□□□ -0.96
PHC3-216ENST00000497171 GCGRP47871 477 aa9.03□□□□□ -0.96
PHC3-216ENST00000497171 Q3C1V9 767 aa9.03□□□□□ -0.96
PHC3-216ENST00000497171 FAM160A2Q8N612 972 aaPredicted RBP9.03□□□□□ -0.96
PHC3-216ENST00000497171 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms