RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
GTF3C2-213ENST00000495298 ZFYVE9O95405 1425 aa14.83□□□□□ -0.03
GTF3C2-213ENST00000495298 CHD2O14647 1828 aaKnown RBP14.83□□□□□ -0.04
GTF3C2-213ENST00000495298 ANKRD30AQ9BXX3 1397 aa14.83□□□□□ -0.04
GTF3C2-213ENST00000495298 COL16A1Q07092 1604 aaPredicted RBP14.81□□□□□ -0.04
GTF3C2-213ENST00000495298 ADGRL2O95490 1459 aa14.81□□□□□ -0.04
GTF3C2-213ENST00000495298 TMEM131LA2VDJ0 1609 aa14.81□□□□□ -0.04
GTF3C2-213ENST00000495298 LRP6O75581 1613 aa14.8□□□□□ -0.04
GTF3C2-213ENST00000495298 MSH6P52701 1360 aa14.79□□□□□ -0.04
GTF3C2-213ENST00000495298 RIMS2Q9UQ26 1411 aa14.78□□□□□ -0.04
GTF3C2-213ENST00000495298 PLEKHG1Q9ULL1 1385 aa14.78□□□□□ -0.04
GTF3C2-213ENST00000495298 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
GTF3C2-213ENST00000495298 BCANQ96GW7 911 aa14.77□□□□□ -0.05
GTF3C2-213ENST00000495298 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
GTF3C2-213ENST00000495298 JCADQ9P266 1359 aa14.76□□□□□ -0.05
GTF3C2-213ENST00000495298 SLC52A1Q9NWF4 448 aa14.76□□□□□ -0.05
GTF3C2-213ENST00000495298 ADAMTS13Q76LX8 1427 aa14.75□□□□□ -0.05
GTF3C2-213ENST00000495298 ANKRD50Q9ULJ7 1429 aa14.75□□□□□ -0.05
GTF3C2-213ENST00000495298 NUTM2DQ5VT03 806 aaPredicted RBP14.75□□□□□ -0.05
GTF3C2-213ENST00000495298 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.75□□□□□ -0.05
GTF3C2-213ENST00000495298 E9PCH4 1651 aa14.74□□□□□ -0.05
GTF3C2-213ENST00000495298 UNC13BO14795 1591 aa14.73□□□□□ -0.05
GTF3C2-213ENST00000495298 APLP2Q06481 763 aa14.72□□□□□ -0.05
GTF3C2-213ENST00000495298 FAM50AQ14320 339 aaKnown RBP14.72□□□□□ -0.05
GTF3C2-213ENST00000495298 AHDC1Q5TGY3 1603 aaPredicted RBP14.72□□□□□ -0.05
GTF3C2-213ENST00000495298 PPP1R15AO75807 674 aaPredicted RBP14.71□□□□□ -0.05
GTF3C2-213ENST00000495298 SHPRHQ149N8 1683 aa14.71□□□□□ -0.06
GTF3C2-213ENST00000495298 DIP2AQ14689 1571 aa14.7□□□□□ -0.06
GTF3C2-213ENST00000495298 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
GTF3C2-213ENST00000495298 TBX22Q9Y458 520 aa14.7□□□□□ -0.06
GTF3C2-213ENST00000495298 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
GTF3C2-213ENST00000495298 NRXN3Q9Y4C0 1643 aa14.68□□□□□ -0.06
GTF3C2-213ENST00000495298 NCOA3Q9Y6Q9 1424 aa14.67□□□□□ -0.06
GTF3C2-213ENST00000495298 IQGAP3Q86VI3 1631 aa14.67□□□□□ -0.06
GTF3C2-213ENST00000495298 C14orf37Q86TY3 774 aa14.67□□□□□ -0.06
GTF3C2-213ENST00000495298 TRIM52Q96A61 297 aa14.66□□□□□ -0.06
GTF3C2-213ENST00000495298 XRN1Q8IZH2 1706 aaKnown RBP14.66□□□□□ -0.06
GTF3C2-213ENST00000495298 SPATA31A6Q5VVP1 1343 aa14.66□□□□□ -0.06
GTF3C2-213ENST00000495298 BRINP3Q76B58 766 aa14.65□□□□□ -0.06
GTF3C2-213ENST00000495298 UPF1Q92900 1129 aaKnown RBP eCLIP14.65□□□□□ -0.06
GTF3C2-213ENST00000495298 TRPM2O94759 1503 aa14.65□□□□□ -0.06
GTF3C2-213ENST00000495298 MEX3CQ5U5Q3 659 aaKnown RBP14.64□□□□□ -0.07
GTF3C2-213ENST00000495298 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
GTF3C2-213ENST00000495298 PIK3R4Q99570 1358 aa14.63□□□□□ -0.07
GTF3C2-213ENST00000495298 ASXL1Q8IXJ9 1541 aa14.63□□□□□ -0.07
GTF3C2-213ENST00000495298 CADPS2Q86UW7 1296 aa14.63□□□□□ -0.07
GTF3C2-213ENST00000495298 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.63□□□□□ -0.07
GTF3C2-213ENST00000495298 AMOTL2Q9Y2J4 779 aa14.63□□□□□ -0.07
GTF3C2-213ENST00000495298 ATF3P18847 181 aa14.62□□□□□ -0.07
GTF3C2-213ENST00000495298 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
GTF3C2-213ENST00000495298 NHSL1Q5SYE7 1610 aa14.62□□□□□ -0.07
GTF3C2-213ENST00000495298 MST1RQ04912 1400 aa14.61□□□□□ -0.07
GTF3C2-213ENST00000495298 NUTM2BA6NNL0 878 aaPredicted RBP14.61□□□□□ -0.07
GTF3C2-213ENST00000495298 NUTM2EB1AL46 878 aaPredicted RBP14.61□□□□□ -0.07
GTF3C2-213ENST00000495298 ZNF772Q68DY9 489 aaPredicted RBP14.61□□□□□ -0.07
GTF3C2-213ENST00000495298 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
GTF3C2-213ENST00000495298 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
GTF3C2-213ENST00000495298 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
GTF3C2-213ENST00000495298 NALCNQ8IZF0 1738 aa14.59□□□□□ -0.07
GTF3C2-213ENST00000495298 DDX17Q92841 729 aaKnown RBP14.59□□□□□ -0.07
GTF3C2-213ENST00000495298 NUP155O75694 1391 aa14.59□□□□□ -0.07
GTF3C2-213ENST00000495298 METP08581 1390 aa14.59□□□□□ -0.07
GTF3C2-213ENST00000495298 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
GTF3C2-213ENST00000495298 DCCP43146 1447 aa14.58□□□□□ -0.07
GTF3C2-213ENST00000495298 SRCAPQ6ZRS2 3230 aa14.58□□□□□ -0.08
GTF3C2-213ENST00000495298 AFF2P51816 1311 aa14.58□□□□□ -0.08
GTF3C2-213ENST00000495298 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.08
GTF3C2-213ENST00000495298 RXRBP28702 533 aa14.57□□□□□ -0.08
GTF3C2-213ENST00000495298 RGS12O14924 1447 aa14.57□□□□□ -0.08
GTF3C2-213ENST00000495298 CDK12Q9NYV4 1490 aaPredicted RBP14.56□□□□□ -0.08
GTF3C2-213ENST00000495298 NEXMIFQ5QGS0 1516 aa14.55□□□□□ -0.08
GTF3C2-213ENST00000495298 CLTCL1P53675 1640 aa14.55□□□□□ -0.08
GTF3C2-213ENST00000495298 ITGAEP38570 1179 aa14.54□□□□□ -0.08
GTF3C2-213ENST00000495298 PNPLA6Q8IY17 1366 aa14.54□□□□□ -0.08
GTF3C2-213ENST00000495298 ADGRL3Q9HAR2 1447 aa14.54□□□□□ -0.08
GTF3C2-213ENST00000495298 C8orf37Q96NL8 207 aa14.52□□□□□ -0.09
GTF3C2-213ENST00000495298 ZNF326Q5BKZ1 582 aaKnown RBP14.5□□□□□ -0.09
GTF3C2-213ENST00000495298 LAMC1P11047 1609 aa14.49□□□□□ -0.09
GTF3C2-213ENST00000495298 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
GTF3C2-213ENST00000495298 C1orf167Q5SNV9 1468 aa14.49□□□□□ -0.09
GTF3C2-213ENST00000495298 LRRC59Q96AG4 307 aaKnown RBP14.48□□□□□ -0.09
GTF3C2-213ENST00000495298 QTRT2Q9H974 415 aaKnown RBP14.48□□□□□ -0.09
GTF3C2-213ENST00000495298 ADAMTS2O95450 1211 aa14.47□□□□□ -0.09
GTF3C2-213ENST00000495298 EP400Q96L91 3159 aa14.47□□□□□ -0.09
GTF3C2-213ENST00000495298 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
GTF3C2-213ENST00000495298 KIF1BO60333 1816 aa14.46□□□□□ -0.09
GTF3C2-213ENST00000495298 RBM6P78332 1123 aaKnown RBP14.45□□□□□ -0.1
GTF3C2-213ENST00000495298 ORAI2Q96SN7 254 aa14.45□□□□□ -0.1
GTF3C2-213ENST00000495298 PTCH1Q13635 1447 aa14.44□□□□□ -0.1
GTF3C2-213ENST00000495298 SOS2Q07890 1332 aaPredicted RBP14.42□□□□□ -0.1
GTF3C2-213ENST00000495298 COL22A1Q8NFW1 1626 aaPredicted RBP14.42□□□□□ -0.1
GTF3C2-213ENST00000495298 NGLY1Q96IV0 654 aa14.42□□□□□ -0.1
GTF3C2-213ENST00000495298 PPLO60437 1756 aa14.4□□□□□ -0.1
GTF3C2-213ENST00000495298 PRAG1Q86YV5 1406 aa14.4□□□□□ -0.1
GTF3C2-213ENST00000495298 FOXD1Q16676 465 aa14.39□□□□□ -0.11
GTF3C2-213ENST00000495298 USP21Q9UK80 565 aa14.39□□□□□ -0.11
GTF3C2-213ENST00000495298 ATRNO75882 1429 aa14.39□□□□□ -0.11
GTF3C2-213ENST00000495298 NAIPQ13075 1403 aa14.39□□□□□ -0.11
GTF3C2-213ENST00000495298 MYOM2P54296 1465 aa14.38□□□□□ -0.11
GTF3C2-213ENST00000495298 MARF1Q9Y4F3 1742 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms