RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 GCC2Q8IWJ2 1684 aa22.66■■□□□ 1.22
PCCB-219ENST00000494742 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
PCCB-219ENST00000494742 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
PCCB-219ENST00000494742 UNC13BO14795 1591 aa22.64■■□□□ 1.22
PCCB-219ENST00000494742 ROBO1Q9Y6N7 1651 aa22.64■■□□□ 1.21
PCCB-219ENST00000494742 PLEKHG1Q9ULL1 1385 aa22.63■■□□□ 1.21
PCCB-219ENST00000494742 MYO5BQ9ULV0 1848 aa22.63■■□□□ 1.21
PCCB-219ENST00000494742 TMEM131LA2VDJ0 1609 aa22.63■■□□□ 1.21
PCCB-219ENST00000494742 CHD2O14647 1828 aaKnown RBP22.62■■□□□ 1.21
PCCB-219ENST00000494742 BCANQ96GW7 911 aa22.61■■□□□ 1.21
PCCB-219ENST00000494742 MSH6P52701 1360 aa22.61■■□□□ 1.21
PCCB-219ENST00000494742 RIMS2Q9UQ26 1411 aa22.59■■□□□ 1.21
PCCB-219ENST00000494742 RGS17Q9UGC6 210 aaPredicted RBP22.59■■□□□ 1.21
PCCB-219ENST00000494742 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.58■■□□□ 1.21
PCCB-219ENST00000494742 ROCK1Q13464 1354 aa22.58■■□□□ 1.21
PCCB-219ENST00000494742 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
PCCB-219ENST00000494742 TBX22Q9Y458 520 aa22.57■■□□□ 1.2
PCCB-219ENST00000494742 NCOA3Q9Y6Q9 1424 aa22.57■■□□□ 1.2
PCCB-219ENST00000494742 E9PCH4 1651 aa22.56■■□□□ 1.2
PCCB-219ENST00000494742 RBM33Q96EV2 1170 aaKnown RBP22.56■■□□□ 1.2
PCCB-219ENST00000494742 SLAIN2Q9P270 581 aa22.55■■□□□ 1.2
PCCB-219ENST00000494742 IQGAP3Q86VI3 1631 aa22.55■■□□□ 1.2
PCCB-219ENST00000494742 DIP2AQ14689 1571 aa22.54■■□□□ 1.2
PCCB-219ENST00000494742 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
PCCB-219ENST00000494742 PHLPP1O60346 1717 aa22.51■■□□□ 1.19
PCCB-219ENST00000494742 ADAMTS13Q76LX8 1427 aa22.48■■□□□ 1.19
PCCB-219ENST00000494742 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
PCCB-219ENST00000494742 JCADQ9P266 1359 aa22.48■■□□□ 1.19
PCCB-219ENST00000494742 NUP155O75694 1391 aa22.45■■□□□ 1.18
PCCB-219ENST00000494742 TRPM2O94759 1503 aa22.44■■□□□ 1.18
PCCB-219ENST00000494742 COL16A1Q07092 1604 aaPredicted RBP22.44■■□□□ 1.18
PCCB-219ENST00000494742 POTEAQ6S8J7 498 aa22.44■■□□□ 1.18
PCCB-219ENST00000494742 C19orf44Q9H6X5 657 aa22.44■■□□□ 1.18
PCCB-219ENST00000494742 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
PCCB-219ENST00000494742 CADPS2Q86UW7 1296 aa22.43■■□□□ 1.18
PCCB-219ENST00000494742 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
PCCB-219ENST00000494742 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.18
PCCB-219ENST00000494742 ATF3P18847 181 aa22.39■■□□□ 1.17
PCCB-219ENST00000494742 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.17
PCCB-219ENST00000494742 SPATA31A6Q5VVP1 1343 aa22.38■■□□□ 1.17
PCCB-219ENST00000494742 SPHKAPQ2M3C7 1700 aa22.38■■□□□ 1.17
PCCB-219ENST00000494742 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
PCCB-219ENST00000494742 SETBP1Q9Y6X0 1596 aa22.37■■□□□ 1.17
PCCB-219ENST00000494742 DCCP43146 1447 aa22.36■■□□□ 1.17
PCCB-219ENST00000494742 SHPRHQ149N8 1683 aa22.36■■□□□ 1.17
PCCB-219ENST00000494742 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
PCCB-219ENST00000494742 PTPRUQ92729 1446 aa22.34■■□□□ 1.17
PCCB-219ENST00000494742 ITGAEP38570 1179 aa22.34■■□□□ 1.17
PCCB-219ENST00000494742 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
PCCB-219ENST00000494742 LRP6O75581 1613 aa22.3■■□□□ 1.16
PCCB-219ENST00000494742 ZNF772Q68DY9 489 aaPredicted RBP22.29■■□□□ 1.16
PCCB-219ENST00000494742 BRINP3Q76B58 766 aa22.29■■□□□ 1.16
PCCB-219ENST00000494742 ZNF326Q5BKZ1 582 aaKnown RBP22.27■■□□□ 1.16
PCCB-219ENST00000494742 MEX3CQ5U5Q3 659 aaKnown RBP22.27■■□□□ 1.16
PCCB-219ENST00000494742 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
PCCB-219ENST00000494742 SETD1AO15047 1707 aaKnown RBP22.26■■□□□ 1.15
PCCB-219ENST00000494742 NEXMIFQ5QGS0 1516 aa22.25■■□□□ 1.15
PCCB-219ENST00000494742 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
PCCB-219ENST00000494742 KIF1BO60333 1816 aa22.24■■□□□ 1.15
PCCB-219ENST00000494742 METP08581 1390 aa22.24■■□□□ 1.15
PCCB-219ENST00000494742 NHSL1Q5SYE7 1610 aa22.24■■□□□ 1.15
PCCB-219ENST00000494742 MST1RQ04912 1400 aa22.23■■□□□ 1.15
PCCB-219ENST00000494742 SETD5Q9C0A6 1442 aa22.23■■□□□ 1.15
PCCB-219ENST00000494742 ADGRL3Q9HAR2 1447 aa22.22■■□□□ 1.15
PCCB-219ENST00000494742 RRBP1Q9P2E9 1410 aaKnown RBP22.21■■□□□ 1.15
PCCB-219ENST00000494742 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
PCCB-219ENST00000494742 NAIPQ13075 1403 aa22.19■■□□□ 1.14
PCCB-219ENST00000494742 LRRC59Q96AG4 307 aaKnown RBP22.18■■□□□ 1.14
PCCB-219ENST00000494742 NALCNQ8IZF0 1738 aa22.17■■□□□ 1.14
PCCB-219ENST00000494742 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
PCCB-219ENST00000494742 VGFO15240 615 aaPredicted RBP22.15■■□□□ 1.14
PCCB-219ENST00000494742 RXRBP28702 533 aa22.15■■□□□ 1.14
PCCB-219ENST00000494742 PTCH1Q13635 1447 aa22.14■■□□□ 1.13
PCCB-219ENST00000494742 NUTM2BA6NNL0 878 aaPredicted RBP22.13■■□□□ 1.13
PCCB-219ENST00000494742 NUTM2EB1AL46 878 aaPredicted RBP22.13■■□□□ 1.13
PCCB-219ENST00000494742 NUTM2AQ8IVF1 878 aaPredicted RBP22.13■■□□□ 1.13
PCCB-219ENST00000494742 PRAG1Q86YV5 1406 aa22.13■■□□□ 1.13
PCCB-219ENST00000494742 LAMC1P11047 1609 aa22.13■■□□□ 1.13
PCCB-219ENST00000494742 RPGRIP1LQ68CZ1 1315 aa22.12■■□□□ 1.13
PCCB-219ENST00000494742 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
PCCB-219ENST00000494742 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
PCCB-219ENST00000494742 HFM1A2PYH4 1435 aa22.11■■□□□ 1.13
PCCB-219ENST00000494742 PNPLA6Q8IY17 1366 aa22.1■■□□□ 1.13
PCCB-219ENST00000494742 C1orf167Q5SNV9 1468 aa22.09■■□□□ 1.13
PCCB-219ENST00000494742 AFF2P51816 1311 aa22.09■■□□□ 1.13
PCCB-219ENST00000494742 PPLO60437 1756 aa22.07■■□□□ 1.12
PCCB-219ENST00000494742 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
PCCB-219ENST00000494742 DDX17Q92841 729 aaKnown RBP22.05■■□□□ 1.12
PCCB-219ENST00000494742 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
PCCB-219ENST00000494742 SOS2Q07890 1332 aaPredicted RBP22.04■■□□□ 1.12
PCCB-219ENST00000494742 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
PCCB-219ENST00000494742 RBM6P78332 1123 aaKnown RBP22.02■■□□□ 1.12
PCCB-219ENST00000494742 QTRT2Q9H974 415 aaKnown RBP22.01■■□□□ 1.11
PCCB-219ENST00000494742 ORAI2Q96SN7 254 aa21.99■■□□□ 1.11
PCCB-219ENST00000494742 NGLY1Q96IV0 654 aa21.98■■□□□ 1.11
PCCB-219ENST00000494742 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
PCCB-219ENST00000494742 COL22A1Q8NFW1 1626 aaPredicted RBP21.98■■□□□ 1.11
PCCB-219ENST00000494742 RGS12O14924 1447 aa21.97■■□□□ 1.11
PCCB-219ENST00000494742 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
PCCB-219ENST00000494742 CCDC144AA2RUR9 1427 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms