RNA–Protein interactions for RNA: ENST00000494089.1

HS6ST1-204, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

TSL 2

Gene HS6ST1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-204ENST00000494089 MSH6P52701 1360 aa27.63■■■□□ 2.01
HS6ST1-204ENST00000494089 ANKRD50Q9ULJ7 1429 aa27.61■■■□□ 2.01
HS6ST1-204ENST00000494089 NCOA3Q9Y6Q9 1424 aa27.61■■■□□ 2.01
HS6ST1-204ENST00000494089 BCANQ96GW7 911 aa27.61■■■□□ 2.01
HS6ST1-204ENST00000494089 PLEKHG1Q9ULL1 1385 aa27.6■■■□□ 2.01
HS6ST1-204ENST00000494089 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
HS6ST1-204ENST00000494089 ROBO1Q9Y6N7 1651 aa27.59■■■□□ 2.01
HS6ST1-204ENST00000494089 SLAIN2Q9P270 581 aa27.58■■■□□ 2.01
HS6ST1-204ENST00000494089 TBX22Q9Y458 520 aa27.57■■■□□ 2
HS6ST1-204ENST00000494089 ZFYVE9O95405 1425 aa27.57■■■□□ 2
HS6ST1-204ENST00000494089 PPP1R15AO75807 674 aaPredicted RBP27.54■■■□□ 2
HS6ST1-204ENST00000494089 RIMS2Q9UQ26 1411 aa27.52■■■□□ 2
HS6ST1-204ENST00000494089 JCADQ9P266 1359 aa27.52■■■□□ 2
HS6ST1-204ENST00000494089 FAM50AQ14320 339 aaKnown RBP27.52■■■□□ 2
HS6ST1-204ENST00000494089 PIK3R4Q99570 1358 aa27.51■■□□□ 1.99
HS6ST1-204ENST00000494089 CHD2O14647 1828 aaKnown RBP27.51■■□□□ 1.99
HS6ST1-204ENST00000494089 POTEAQ6S8J7 498 aa27.49■■□□□ 1.99
HS6ST1-204ENST00000494089 RBM33Q96EV2 1170 aaKnown RBP27.48■■□□□ 1.99
HS6ST1-204ENST00000494089 TMEM131LA2VDJ0 1609 aa27.48■■□□□ 1.99
HS6ST1-204ENST00000494089 GCC2Q8IWJ2 1684 aa27.46■■□□□ 1.99
HS6ST1-204ENST00000494089 CADPS2Q86UW7 1296 aa27.45■■□□□ 1.98
HS6ST1-204ENST00000494089 DIP2AQ14689 1571 aa27.44■■□□□ 1.98
HS6ST1-204ENST00000494089 C19orf44Q9H6X5 657 aa27.44■■□□□ 1.98
HS6ST1-204ENST00000494089 ROCK1Q13464 1354 aa27.44■■□□□ 1.98
HS6ST1-204ENST00000494089 PHLPP1O60346 1717 aa27.44■■□□□ 1.98
HS6ST1-204ENST00000494089 SPATA31A6Q5VVP1 1343 aa27.43■■□□□ 1.98
HS6ST1-204ENST00000494089 UNC13BO14795 1591 aa27.43■■□□□ 1.98
HS6ST1-204ENST00000494089 ATF3P18847 181 aa27.39■■□□□ 1.98
HS6ST1-204ENST00000494089 C14orf37Q86TY3 774 aa27.39■■□□□ 1.98
HS6ST1-204ENST00000494089 MYO5BQ9ULV0 1848 aa27.39■■□□□ 1.97
HS6ST1-204ENST00000494089 CHGAP10645 457 aaKnown RBP27.38■■□□□ 1.97
HS6ST1-204ENST00000494089 ADAMTS13Q76LX8 1427 aa27.38■■□□□ 1.97
HS6ST1-204ENST00000494089 ZNF772Q68DY9 489 aaPredicted RBP27.36■■□□□ 1.97
HS6ST1-204ENST00000494089 COL16A1Q07092 1604 aaPredicted RBP27.34■■□□□ 1.97
HS6ST1-204ENST00000494089 IQGAP3Q86VI3 1631 aa27.33■■□□□ 1.97
HS6ST1-204ENST00000494089 E9PCH4 1651 aa27.33■■□□□ 1.97
HS6ST1-204ENST00000494089 TRPM2O94759 1503 aa27.32■■□□□ 1.96
HS6ST1-204ENST00000494089 AHDC1Q5TGY3 1603 aaPredicted RBP27.32■■□□□ 1.96
HS6ST1-204ENST00000494089 DCCP43146 1447 aa27.31■■□□□ 1.96
HS6ST1-204ENST00000494089 AMOTL2Q9Y2J4 779 aa27.3■■□□□ 1.96
HS6ST1-204ENST00000494089 NUP155O75694 1391 aa27.29■■□□□ 1.96
HS6ST1-204ENST00000494089 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.29■■□□□ 1.96
HS6ST1-204ENST00000494089 MEX3CQ5U5Q3 659 aaKnown RBP27.28■■□□□ 1.96
HS6ST1-204ENST00000494089 SHPRHQ149N8 1683 aa27.25■■□□□ 1.95
HS6ST1-204ENST00000494089 NUTM2DQ5VT03 806 aaPredicted RBP27.24■■□□□ 1.95
HS6ST1-204ENST00000494089 BRINP3Q76B58 766 aa27.22■■□□□ 1.95
HS6ST1-204ENST00000494089 LRP6O75581 1613 aa27.2■■□□□ 1.95
HS6ST1-204ENST00000494089 SETBP1Q9Y6X0 1596 aa27.19■■□□□ 1.94
HS6ST1-204ENST00000494089 PTPRUQ92729 1446 aa27.19■■□□□ 1.94
HS6ST1-204ENST00000494089 SETD5Q9C0A6 1442 aa27.17■■□□□ 1.94
HS6ST1-204ENST00000494089 RXRBP28702 533 aa27.17■■□□□ 1.94
HS6ST1-204ENST00000494089 LRRC59Q96AG4 307 aaKnown RBP27.17■■□□□ 1.94
HS6ST1-204ENST00000494089 CDK12Q9NYV4 1490 aaPredicted RBP27.15■■□□□ 1.94
HS6ST1-204ENST00000494089 XRN1Q8IZH2 1706 aaKnown RBP27.14■■□□□ 1.94
HS6ST1-204ENST00000494089 ZNF326Q5BKZ1 582 aaKnown RBP27.13■■□□□ 1.93
HS6ST1-204ENST00000494089 UPF1Q92900 1129 aaKnown RBP eCLIP27.13■■□□□ 1.93
HS6ST1-204ENST00000494089 ASXL1Q8IXJ9 1541 aa27.11■■□□□ 1.93
HS6ST1-204ENST00000494089 MST1RQ04912 1400 aa27.11■■□□□ 1.93
HS6ST1-204ENST00000494089 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
HS6ST1-204ENST00000494089 SPHKAPQ2M3C7 1700 aa27.1■■□□□ 1.93
HS6ST1-204ENST00000494089 NRXN3Q9Y4C0 1643 aa27.1■■□□□ 1.93
HS6ST1-204ENST00000494089 TRIM52Q96A61 297 aa27.08■■□□□ 1.93
HS6ST1-204ENST00000494089 ADGRL3Q9HAR2 1447 aa27.07■■□□□ 1.92
HS6ST1-204ENST00000494089 ITGAEP38570 1179 aa27.07■■□□□ 1.92
HS6ST1-204ENST00000494089 NHSL1Q5SYE7 1610 aa27.06■■□□□ 1.92
HS6ST1-204ENST00000494089 NUTM2BA6NNL0 878 aaPredicted RBP27.06■■□□□ 1.92
HS6ST1-204ENST00000494089 NUTM2EB1AL46 878 aaPredicted RBP27.06■■□□□ 1.92
HS6ST1-204ENST00000494089 NUTM2AQ8IVF1 878 aaPredicted RBP27.06■■□□□ 1.92
HS6ST1-204ENST00000494089 METP08581 1390 aa27.06■■□□□ 1.92
HS6ST1-204ENST00000494089 AFF2P51816 1311 aa27.04■■□□□ 1.92
HS6ST1-204ENST00000494089 VGFO15240 615 aaPredicted RBP27.03■■□□□ 1.92
HS6ST1-204ENST00000494089 RBM6P78332 1123 aaKnown RBP27■■□□□ 1.91
HS6ST1-204ENST00000494089 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
HS6ST1-204ENST00000494089 PNPLA6Q8IY17 1366 aa26.98■■□□□ 1.91
HS6ST1-204ENST00000494089 RPGRIP1LQ68CZ1 1315 aa26.98■■□□□ 1.91
HS6ST1-204ENST00000494089 PTCH1Q13635 1447 aa26.98■■□□□ 1.91
HS6ST1-204ENST00000494089 QTRT2Q9H974 415 aaKnown RBP26.96■■□□□ 1.91
HS6ST1-204ENST00000494089 PRAG1Q86YV5 1406 aa26.96■■□□□ 1.91
HS6ST1-204ENST00000494089 NGLY1Q96IV0 654 aa26.95■■□□□ 1.9
HS6ST1-204ENST00000494089 KIF1BO60333 1816 aa26.95■■□□□ 1.9
HS6ST1-204ENST00000494089 C8orf37Q96NL8 207 aa26.94■■□□□ 1.9
HS6ST1-204ENST00000494089 LAMC1P11047 1609 aa26.94■■□□□ 1.9
HS6ST1-204ENST00000494089 CLTCL1P53675 1640 aa26.94■■□□□ 1.9
HS6ST1-204ENST00000494089 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
HS6ST1-204ENST00000494089 SOS2Q07890 1332 aaPredicted RBP26.91■■□□□ 1.9
HS6ST1-204ENST00000494089 NALCNQ8IZF0 1738 aa26.9■■□□□ 1.9
HS6ST1-204ENST00000494089 HFM1A2PYH4 1435 aa26.89■■□□□ 1.89
HS6ST1-204ENST00000494089 RRBP1Q9P2E9 1410 aaKnown RBP26.89■■□□□ 1.89
HS6ST1-204ENST00000494089 NAIPQ13075 1403 aa26.88■■□□□ 1.89
HS6ST1-204ENST00000494089 FOXD1Q16676 465 aa26.86■■□□□ 1.89
HS6ST1-204ENST00000494089 DDX17Q92841 729 aaKnown RBP26.85■■□□□ 1.89
HS6ST1-204ENST00000494089 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
HS6ST1-204ENST00000494089 RGS12O14924 1447 aa26.84■■□□□ 1.89
HS6ST1-204ENST00000494089 TRPC5Q9UL62 973 aaPredicted RBP26.84■■□□□ 1.89
HS6ST1-204ENST00000494089 FNBP4Q8N3X1 1017 aaPredicted RBP26.83■■□□□ 1.89
HS6ST1-204ENST00000494089 ORAI2Q96SN7 254 aa26.82■■□□□ 1.88
HS6ST1-204ENST00000494089 ADAMTS2O95450 1211 aa26.81■■□□□ 1.88
HS6ST1-204ENST00000494089 USP21Q9UK80 565 aa26.81■■□□□ 1.88
HS6ST1-204ENST00000494089 NPHP3Q7Z494 1330 aa26.8■■□□□ 1.88
HS6ST1-204ENST00000494089 ATAD2Q6PL18 1390 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms