RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 CLTCL1P53675 1640 aa13.75□□□□□ -0.21
C1orf43-209ENST00000493814 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
C1orf43-209ENST00000493814 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
C1orf43-209ENST00000493814 TRPM2O94759 1503 aa13.74□□□□□ -0.21
C1orf43-209ENST00000493814 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
C1orf43-209ENST00000493814 PLEKHG1Q9ULL1 1385 aa13.73□□□□□ -0.21
C1orf43-209ENST00000493814 TOM1O60784 492 aa13.73□□□□□ -0.21
C1orf43-209ENST00000493814 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
C1orf43-209ENST00000493814 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
C1orf43-209ENST00000493814 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
C1orf43-209ENST00000493814 BCANQ96GW7 911 aa13.72□□□□□ -0.21
C1orf43-209ENST00000493814 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
C1orf43-209ENST00000493814 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.21
C1orf43-209ENST00000493814 TRIM52Q96A61 297 aa13.71□□□□□ -0.21
C1orf43-209ENST00000493814 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
C1orf43-209ENST00000493814 NKTRP30414 1462 aaKnown RBP13.7□□□□□ -0.22
C1orf43-209ENST00000493814 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
C1orf43-209ENST00000493814 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
C1orf43-209ENST00000493814 KCNA6P17658 529 aa13.68□□□□□ -0.22
C1orf43-209ENST00000493814 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
C1orf43-209ENST00000493814 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
C1orf43-209ENST00000493814 PPLO60437 1756 aa13.67□□□□□ -0.22
C1orf43-209ENST00000493814 NUTM2DQ5VT03 806 aaPredicted RBP13.66□□□□□ -0.22
C1orf43-209ENST00000493814 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
C1orf43-209ENST00000493814 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
C1orf43-209ENST00000493814 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
C1orf43-209ENST00000493814 ZNF326Q5BKZ1 582 aaKnown RBP13.65□□□□□ -0.22
C1orf43-209ENST00000493814 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
C1orf43-209ENST00000493814 PROSER2Q86WR7 435 aaPredicted RBP13.64□□□□□ -0.23
C1orf43-209ENST00000493814 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
C1orf43-209ENST00000493814 ROBO1Q9Y6N7 1651 aa13.63□□□□□ -0.23
C1orf43-209ENST00000493814 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
C1orf43-209ENST00000493814 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
C1orf43-209ENST00000493814 IFT172Q9UG01 1749 aa13.63□□□□□ -0.23
C1orf43-209ENST00000493814 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
C1orf43-209ENST00000493814 HSPA1LP34931 641 aa13.62□□□□□ -0.23
C1orf43-209ENST00000493814 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
C1orf43-209ENST00000493814 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
C1orf43-209ENST00000493814 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
C1orf43-209ENST00000493814 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
C1orf43-209ENST00000493814 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
C1orf43-209ENST00000493814 MSH6P52701 1360 aa13.59□□□□□ -0.23
C1orf43-209ENST00000493814 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.23
C1orf43-209ENST00000493814 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
C1orf43-209ENST00000493814 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
C1orf43-209ENST00000493814 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
C1orf43-209ENST00000493814 FOXD1Q16676 465 aa13.57□□□□□ -0.24
C1orf43-209ENST00000493814 MPHOSPH9Q99550 1183 aa13.57□□□□□ -0.24
C1orf43-209ENST00000493814 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
C1orf43-209ENST00000493814 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
C1orf43-209ENST00000493814 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
C1orf43-209ENST00000493814 AMOTL2Q9Y2J4 779 aa13.55□□□□□ -0.24
C1orf43-209ENST00000493814 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
C1orf43-209ENST00000493814 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
C1orf43-209ENST00000493814 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
C1orf43-209ENST00000493814 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
C1orf43-209ENST00000493814 METP08581 1390 aa13.53□□□□□ -0.24
C1orf43-209ENST00000493814 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
C1orf43-209ENST00000493814 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
C1orf43-209ENST00000493814 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
C1orf43-209ENST00000493814 DCCP43146 1447 aa13.49□□□□□ -0.25
C1orf43-209ENST00000493814 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
C1orf43-209ENST00000493814 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
C1orf43-209ENST00000493814 LAMC1P11047 1609 aa13.49□□□□□ -0.25
C1orf43-209ENST00000493814 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
C1orf43-209ENST00000493814 ATF3P18847 181 aa13.48□□□□□ -0.25
C1orf43-209ENST00000493814 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
C1orf43-209ENST00000493814 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
C1orf43-209ENST00000493814 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
C1orf43-209ENST00000493814 NHSL1Q5SYE7 1610 aa13.47□□□□□ -0.25
C1orf43-209ENST00000493814 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
C1orf43-209ENST00000493814 ILDR2Q71H61 639 aa13.47□□□□□ -0.25
C1orf43-209ENST00000493814 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
C1orf43-209ENST00000493814 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
C1orf43-209ENST00000493814 SHPRHQ149N8 1683 aa13.46□□□□□ -0.26
C1orf43-209ENST00000493814 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
C1orf43-209ENST00000493814 PIK3C2GO75747 1445 aa13.44□□□□□ -0.26
C1orf43-209ENST00000493814 MST1RQ04912 1400 aa13.44□□□□□ -0.26
C1orf43-209ENST00000493814 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
C1orf43-209ENST00000493814 MYOM2P54296 1465 aa13.43□□□□□ -0.26
C1orf43-209ENST00000493814 HRCP23327 699 aa13.43□□□□□ -0.26
C1orf43-209ENST00000493814 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
C1orf43-209ENST00000493814 ROBO2Q9HCK4 1378 aa13.42□□□□□ -0.26
C1orf43-209ENST00000493814 NRXN1Q9ULB1 1477 aa13.41□□□□□ -0.26
C1orf43-209ENST00000493814 CDC42BPGQ6DT37 1551 aa13.41□□□□□ -0.26
C1orf43-209ENST00000493814 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
C1orf43-209ENST00000493814 JCADQ9P266 1359 aa13.4□□□□□ -0.26
C1orf43-209ENST00000493814 TECPR2O15040 1411 aa13.39□□□□□ -0.27
C1orf43-209ENST00000493814 FMN2Q9NZ56 1722 aa13.39□□□□□ -0.27
C1orf43-209ENST00000493814 RGPD8O14715 1765 aaPredicted RBP13.38□□□□□ -0.27
C1orf43-209ENST00000493814 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
C1orf43-209ENST00000493814 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
C1orf43-209ENST00000493814 YTHDC2Q9H6S0 1430 aaKnown RBP13.37□□□□□ -0.27
C1orf43-209ENST00000493814 SOCS7O14512 581 aa13.36□□□□□ -0.27
C1orf43-209ENST00000493814 TMEM132EQ6IEE7 984 aa13.36□□□□□ -0.27
C1orf43-209ENST00000493814 STK26Q9P289 416 aa13.36□□□□□ -0.27
C1orf43-209ENST00000493814 ABCC11Q96J66 1382 aa13.35□□□□□ -0.27
C1orf43-209ENST00000493814 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
C1orf43-209ENST00000493814 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
C1orf43-209ENST00000493814 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms