RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 NAIPQ13075 1403 aa15.61■□□□□ 0.09
TRAPPC12-222ENST00000493792 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRAPPC12-222ENST00000493792 TRIM52Q96A61 297 aa15.61■□□□□ 0.09
TRAPPC12-222ENST00000493792 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
TRAPPC12-222ENST00000493792 TET3O43151 1660 aa15.6■□□□□ 0.09
TRAPPC12-222ENST00000493792 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
TRAPPC12-222ENST00000493792 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
TRAPPC12-222ENST00000493792 JCADQ9P266 1359 aa15.59■□□□□ 0.09
TRAPPC12-222ENST00000493792 NOS1P29475 1434 aa15.59■□□□□ 0.09
TRAPPC12-222ENST00000493792 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.09
TRAPPC12-222ENST00000493792 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
TRAPPC12-222ENST00000493792 PIK3C2BO00750 1634 aa15.56■□□□□ 0.08
TRAPPC12-222ENST00000493792 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
TRAPPC12-222ENST00000493792 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-222ENST00000493792 E9PCH4 1651 aa15.54■□□□□ 0.08
TRAPPC12-222ENST00000493792 KDM5AP29375 1690 aaKnown RBP15.54■□□□□ 0.08
TRAPPC12-222ENST00000493792 MSH6P52701 1360 aa15.53■□□□□ 0.08
TRAPPC12-222ENST00000493792 SPATA31A6Q5VVP1 1343 aa15.51■□□□□ 0.07
TRAPPC12-222ENST00000493792 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
TRAPPC12-222ENST00000493792 ZNF772Q68DY9 489 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC12-222ENST00000493792 NKTRP30414 1462 aaKnown RBP15.51■□□□□ 0.07
TRAPPC12-222ENST00000493792 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
TRAPPC12-222ENST00000493792 LRP6O75581 1613 aa15.5■□□□□ 0.07
TRAPPC12-222ENST00000493792 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
TRAPPC12-222ENST00000493792 TBX22Q9Y458 520 aa15.49■□□□□ 0.07
TRAPPC12-222ENST00000493792 SRCAPQ6ZRS2 3230 aa15.49■□□□□ 0.07
TRAPPC12-222ENST00000493792 SETD5Q9C0A6 1442 aa15.49■□□□□ 0.07
TRAPPC12-222ENST00000493792 SETD1AO15047 1707 aaKnown RBP15.48■□□□□ 0.07
TRAPPC12-222ENST00000493792 BCANQ96GW7 911 aa15.48■□□□□ 0.07
TRAPPC12-222ENST00000493792 RXRBP28702 533 aa15.47■□□□□ 0.07
TRAPPC12-222ENST00000493792 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
TRAPPC12-222ENST00000493792 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
TRAPPC12-222ENST00000493792 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
TRAPPC12-222ENST00000493792 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
TRAPPC12-222ENST00000493792 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
TRAPPC12-222ENST00000493792 MEX3CQ5U5Q3 659 aaKnown RBP15.45■□□□□ 0.06
TRAPPC12-222ENST00000493792 PLEKHG1Q9ULL1 1385 aa15.45■□□□□ 0.06
TRAPPC12-222ENST00000493792 SPHKAPQ2M3C7 1700 aa15.45■□□□□ 0.06
TRAPPC12-222ENST00000493792 COL16A1Q07092 1604 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-222ENST00000493792 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
TRAPPC12-222ENST00000493792 RAB3GAP2Q9H2M9 1393 aa15.44■□□□□ 0.06
TRAPPC12-222ENST00000493792 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
TRAPPC12-222ENST00000493792 RIMS2Q9UQ26 1411 aa15.43■□□□□ 0.06
TRAPPC12-222ENST00000493792 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-222ENST00000493792 FOXD1Q16676 465 aa15.42■□□□□ 0.06
TRAPPC12-222ENST00000493792 MYO5BQ9ULV0 1848 aa15.42■□□□□ 0.06
TRAPPC12-222ENST00000493792 BRINP3Q76B58 766 aa15.41■□□□□ 0.06
TRAPPC12-222ENST00000493792 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRAPPC12-222ENST00000493792 MPHOSPH9Q99550 1183 aa15.41■□□□□ 0.06
TRAPPC12-222ENST00000493792 TMEM131LA2VDJ0 1609 aa15.41■□□□□ 0.06
TRAPPC12-222ENST00000493792 ACIN1Q9UKV3 1341 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-222ENST00000493792 ATF3P18847 181 aa15.4■□□□□ 0.06
TRAPPC12-222ENST00000493792 NUTM2BA6NNL0 878 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 NUTM2EB1AL46 878 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 ZNF326Q5BKZ1 582 aaKnown RBP15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 C14orf37Q86TY3 774 aa15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 ADAMTS13Q76LX8 1427 aa15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 CDK12Q9NYV4 1490 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-222ENST00000493792 TRPM2O94759 1503 aa15.38■□□□□ 0.05
TRAPPC12-222ENST00000493792 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC12-222ENST00000493792 AFF2P51816 1311 aa15.38■□□□□ 0.05
TRAPPC12-222ENST00000493792 CLTCL1P53675 1640 aa15.37■□□□□ 0.05
TRAPPC12-222ENST00000493792 CHD2O14647 1828 aaKnown RBP15.36■□□□□ 0.05
TRAPPC12-222ENST00000493792 AHDC1Q5TGY3 1603 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-222ENST00000493792 QTRT2Q9H974 415 aaKnown RBP15.36■□□□□ 0.05
TRAPPC12-222ENST00000493792 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
TRAPPC12-222ENST00000493792 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
TRAPPC12-222ENST00000493792 KIF1BO60333 1816 aa15.34■□□□□ 0.05
TRAPPC12-222ENST00000493792 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
TRAPPC12-222ENST00000493792 RBM6P78332 1123 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-222ENST00000493792 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
TRAPPC12-222ENST00000493792 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
TRAPPC12-222ENST00000493792 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
TRAPPC12-222ENST00000493792 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-222ENST00000493792 RGS12O14924 1447 aa15.3■□□□□ 0.04
TRAPPC12-222ENST00000493792 HRCP23327 699 aa15.3■□□□□ 0.04
TRAPPC12-222ENST00000493792 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
TRAPPC12-222ENST00000493792 DDX17Q92841 729 aaKnown RBP15.3■□□□□ 0.04
TRAPPC12-222ENST00000493792 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
TRAPPC12-222ENST00000493792 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC12-222ENST00000493792 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
TRAPPC12-222ENST00000493792 MST1RQ04912 1400 aa15.27■□□□□ 0.04
TRAPPC12-222ENST00000493792 DCCP43146 1447 aa15.26■□□□□ 0.03
TRAPPC12-222ENST00000493792 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
TRAPPC12-222ENST00000493792 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
TRAPPC12-222ENST00000493792 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
TRAPPC12-222ENST00000493792 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
TRAPPC12-222ENST00000493792 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
TRAPPC12-222ENST00000493792 VGFO15240 615 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC12-222ENST00000493792 ADAMTS2O95450 1211 aa15.23■□□□□ 0.03
TRAPPC12-222ENST00000493792 METP08581 1390 aa15.23■□□□□ 0.03
TRAPPC12-222ENST00000493792 RPGRIP1LQ68CZ1 1315 aa15.22■□□□□ 0.03
TRAPPC12-222ENST00000493792 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC12-222ENST00000493792 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.02
TRAPPC12-222ENST00000493792 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
TRAPPC12-222ENST00000493792 USP21Q9UK80 565 aa15.2■□□□□ 0.02
TRAPPC12-222ENST00000493792 PPLO60437 1756 aa15.2■□□□□ 0.02
TRAPPC12-222ENST00000493792 ATAD2Q6PL18 1390 aa15.2■□□□□ 0.02
TRAPPC12-222ENST00000493792 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms