RNA–Protein interactions for RNA: ENST00000493667.1

LMO2-206, Transcript of LIM domain only 2, humanhuman

TSL 3

Gene LMO2, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-206ENST00000493667 SLC52A1Q9NWF4 448 aa29.23■■■□□ 2.27
LMO2-206ENST00000493667 SLC26A8Q96RN1 970 aa29.22■■■□□ 2.27
LMO2-206ENST00000493667 SENP3Q9H4L4 574 aaPredicted RBP29.22■■■□□ 2.27
LMO2-206ENST00000493667 PPARGC1BQ86YN6 1023 aaKnown RBP29.21■■■□□ 2.27
LMO2-206ENST00000493667 NKTRP30414 1462 aaKnown RBP29.18■■■□□ 2.26
LMO2-206ENST00000493667 TMEM94Q12767 1356 aa29.18■■■□□ 2.26
LMO2-206ENST00000493667 RIMS2Q9UQ26 1411 aa29.18■■■□□ 2.26
LMO2-206ENST00000493667 SPHKAPQ2M3C7 1700 aa29.17■■■□□ 2.26
LMO2-206ENST00000493667 ROBO1Q9Y6N7 1651 aa29.17■■■□□ 2.26
LMO2-206ENST00000493667 KCNA6P17658 529 aa29.14■■■□□ 2.26
LMO2-206ENST00000493667 ITGAEP38570 1179 aa29.14■■■□□ 2.26
LMO2-206ENST00000493667 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
LMO2-206ENST00000493667 RBM33Q96EV2 1170 aaKnown RBP29.12■■■□□ 2.25
LMO2-206ENST00000493667 NUP155O75694 1391 aa29.09■■■□□ 2.25
LMO2-206ENST00000493667 DIP2AQ14689 1571 aa29.06■■■□□ 2.24
LMO2-206ENST00000493667 PROSER2Q86WR7 435 aaPredicted RBP29.06■■■□□ 2.24
LMO2-206ENST00000493667 BCANQ96GW7 911 aa29.06■■■□□ 2.24
LMO2-206ENST00000493667 FAM135BQ49AJ0 1406 aa29.05■■■□□ 2.24
LMO2-206ENST00000493667 ADAMTS13Q76LX8 1427 aa29.05■■■□□ 2.24
LMO2-206ENST00000493667 NRXN3Q9Y4C0 1643 aa29.05■■■□□ 2.24
LMO2-206ENST00000493667 CHGAP10645 457 aaKnown RBP29.04■■■□□ 2.24
LMO2-206ENST00000493667 PPP1R15AO75807 674 aaPredicted RBP29.03■■■□□ 2.24
LMO2-206ENST00000493667 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
LMO2-206ENST00000493667 NUTM2DQ5VT03 806 aaPredicted RBP29.02■■■□□ 2.24
LMO2-206ENST00000493667 CLTCL1P53675 1640 aa29.01■■■□□ 2.23
LMO2-206ENST00000493667 PHLPP1O60346 1717 aa29■■■□□ 2.23
LMO2-206ENST00000493667 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.99■■■□□ 2.23
LMO2-206ENST00000493667 MSH6P52701 1360 aa28.97■■■□□ 2.23
LMO2-206ENST00000493667 TRPM2O94759 1503 aa28.96■■■□□ 2.23
LMO2-206ENST00000493667 PHF23Q9BUL5 403 aaPredicted RBP28.96■■■□□ 2.23
LMO2-206ENST00000493667 XRN1Q8IZH2 1706 aaKnown RBP28.95■■■□□ 2.23
LMO2-206ENST00000493667 KIF1BO60333 1816 aa28.95■■■□□ 2.23
LMO2-206ENST00000493667 HDGFP51858 240 aaKnown RBP28.94■■■□□ 2.22
LMO2-206ENST00000493667 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.94■■■□□ 2.22
LMO2-206ENST00000493667 TBX22Q9Y458 520 aa28.94■■■□□ 2.22
LMO2-206ENST00000493667 SETBP1Q9Y6X0 1596 aa28.93■■■□□ 2.22
LMO2-206ENST00000493667 NAIPQ13075 1403 aa28.93■■■□□ 2.22
LMO2-206ENST00000493667 PTPRUQ92729 1446 aa28.91■■■□□ 2.22
LMO2-206ENST00000493667 COL16A1Q07092 1604 aaPredicted RBP28.91■■■□□ 2.22
LMO2-206ENST00000493667 NEXMIFQ5QGS0 1516 aa28.89■■■□□ 2.22
LMO2-206ENST00000493667 PIK3R4Q99570 1358 aa28.88■■■□□ 2.21
LMO2-206ENST00000493667 RGS17Q9UGC6 210 aaPredicted RBP28.86■■■□□ 2.21
LMO2-206ENST00000493667 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
LMO2-206ENST00000493667 SLAIN2Q9P270 581 aa28.84■■■□□ 2.21
LMO2-206ENST00000493667 SETD1AO15047 1707 aaKnown RBP28.83■■■□□ 2.21
LMO2-206ENST00000493667 HFM1A2PYH4 1435 aa28.8■■■□□ 2.2
LMO2-206ENST00000493667 NALCNQ8IZF0 1738 aa28.8■■■□□ 2.2
LMO2-206ENST00000493667 AHDC1Q5TGY3 1603 aaPredicted RBP28.8■■■□□ 2.2
LMO2-206ENST00000493667 AMOTL2Q9Y2J4 779 aa28.77■■■□□ 2.2
LMO2-206ENST00000493667 PPLO60437 1756 aa28.77■■■□□ 2.2
LMO2-206ENST00000493667 C14orf37Q86TY3 774 aa28.76■■■□□ 2.19
LMO2-206ENST00000493667 SHPRHQ149N8 1683 aa28.76■■■□□ 2.19
LMO2-206ENST00000493667 METP08581 1390 aa28.75■■■□□ 2.19
LMO2-206ENST00000493667 ZNF326Q5BKZ1 582 aaKnown RBP28.75■■■□□ 2.19
LMO2-206ENST00000493667 NHSL1Q5SYE7 1610 aa28.72■■■□□ 2.19
LMO2-206ENST00000493667 C19orf44Q9H6X5 657 aa28.71■■■□□ 2.19
LMO2-206ENST00000493667 JCADQ9P266 1359 aa28.71■■■□□ 2.19
LMO2-206ENST00000493667 LRP6O75581 1613 aa28.7■■■□□ 2.19
LMO2-206ENST00000493667 DCCP43146 1447 aa28.69■■■□□ 2.18
LMO2-206ENST00000493667 CADPS2Q86UW7 1296 aa28.69■■■□□ 2.18
LMO2-206ENST00000493667 ASXL1Q8IXJ9 1541 aa28.68■■■□□ 2.18
LMO2-206ENST00000493667 ATF3P18847 181 aa28.67■■■□□ 2.18
LMO2-206ENST00000493667 POTEAQ6S8J7 498 aa28.67■■■□□ 2.18
LMO2-206ENST00000493667 MST1RQ04912 1400 aa28.66■■■□□ 2.18
LMO2-206ENST00000493667 TRIM52Q96A61 297 aa28.65■■■□□ 2.18
LMO2-206ENST00000493667 IFT172Q9UG01 1749 aa28.64■■■□□ 2.18
LMO2-206ENST00000493667 ADGRL3Q9HAR2 1447 aa28.63■■■□□ 2.17
LMO2-206ENST00000493667 BRINP3Q76B58 766 aa28.61■■■□□ 2.17
LMO2-206ENST00000493667 SLC4A1APQ9BWU0 796 aaKnown RBP28.58■■■□□ 2.17
LMO2-206ENST00000493667 PTCH1Q13635 1447 aa28.56■■■□□ 2.16
LMO2-206ENST00000493667 FOXD1Q16676 465 aa28.55■■■□□ 2.16
LMO2-206ENST00000493667 SPATA31A6Q5VVP1 1343 aa28.54■■■□□ 2.16
LMO2-206ENST00000493667 PRAG1Q86YV5 1406 aa28.53■■■□□ 2.16
LMO2-206ENST00000493667 LAMC1P11047 1609 aa28.53■■■□□ 2.16
LMO2-206ENST00000493667 ROBO2Q9HCK4 1378 aa28.51■■■□□ 2.16
LMO2-206ENST00000493667 SETD5Q9C0A6 1442 aa28.5■■■□□ 2.15
LMO2-206ENST00000493667 VGFO15240 615 aaPredicted RBP28.48■■■□□ 2.15
LMO2-206ENST00000493667 RPGRIP1LQ68CZ1 1315 aa28.47■■■□□ 2.15
LMO2-206ENST00000493667 C1orf167Q5SNV9 1468 aa28.46■■■□□ 2.15
LMO2-206ENST00000493667 SPATA31E1Q6ZUB1 1445 aa28.46■■■□□ 2.15
LMO2-206ENST00000493667 DDX17Q92841 729 aaKnown RBP28.46■■■□□ 2.15
LMO2-206ENST00000493667 KNDC1Q76NI1 1749 aa28.46■■■□□ 2.15
LMO2-206ENST00000493667 CCDC144AA2RUR9 1427 aa28.44■■■□□ 2.14
LMO2-206ENST00000493667 MEX3CQ5U5Q3 659 aaKnown RBP28.43■■■□□ 2.14
LMO2-206ENST00000493667 CDC42BPGQ6DT37 1551 aa28.41■■■□□ 2.14
LMO2-206ENST00000493667 ADGRF5Q8IZF2 1346 aa28.4■■■□□ 2.14
LMO2-206ENST00000493667 PNPLA6Q8IY17 1366 aa28.39■■■□□ 2.14
LMO2-206ENST00000493667 NUTM2BA6NNL0 878 aaPredicted RBP28.39■■■□□ 2.14
LMO2-206ENST00000493667 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.14
LMO2-206ENST00000493667 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.14
LMO2-206ENST00000493667 MPHOSPH9Q99550 1183 aa28.38■■■□□ 2.13
LMO2-206ENST00000493667 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
LMO2-206ENST00000493667 RGL3Q3MIN7 710 aa28.33■■■□□ 2.13
LMO2-206ENST00000493667 ZNF772Q68DY9 489 aaPredicted RBP28.33■■■□□ 2.13
LMO2-206ENST00000493667 ORAI2Q96SN7 254 aa28.33■■■□□ 2.13
LMO2-206ENST00000493667 TECPR2O15040 1411 aa28.33■■■□□ 2.13
LMO2-206ENST00000493667 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
LMO2-206ENST00000493667 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
LMO2-206ENST00000493667 LRRC59Q96AG4 307 aaKnown RBP28.32■■■□□ 2.12
LMO2-206ENST00000493667 ANKRD30BQ9BXX2 1392 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms