RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 NWD1Q149M9 1564 aa14.01□□□□□ -0.17
NFIA-213ENST00000493627 NKTRP30414 1462 aaKnown RBP14.01□□□□□ -0.17
NFIA-213ENST00000493627 TMEM94Q12767 1356 aa14□□□□□ -0.17
NFIA-213ENST00000493627 SLC26A8Q96RN1 970 aa14□□□□□ -0.17
NFIA-213ENST00000493627 E9PCH4 1651 aa14□□□□□ -0.17
NFIA-213ENST00000493627 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
NFIA-213ENST00000493627 KCNA6P17658 529 aa13.99□□□□□ -0.17
NFIA-213ENST00000493627 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
NFIA-213ENST00000493627 PLEKHG1Q9ULL1 1385 aa13.98□□□□□ -0.17
NFIA-213ENST00000493627 ITGAEP38570 1179 aa13.98□□□□□ -0.17
NFIA-213ENST00000493627 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
NFIA-213ENST00000493627 BCANQ96GW7 911 aa13.97□□□□□ -0.17
NFIA-213ENST00000493627 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
NFIA-213ENST00000493627 NUP155O75694 1391 aa13.96□□□□□ -0.17
NFIA-213ENST00000493627 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
NFIA-213ENST00000493627 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
NFIA-213ENST00000493627 FAM135BQ49AJ0 1406 aa13.94□□□□□ -0.18
NFIA-213ENST00000493627 PROSER2Q86WR7 435 aaPredicted RBP13.94□□□□□ -0.18
NFIA-213ENST00000493627 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
NFIA-213ENST00000493627 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
NFIA-213ENST00000493627 DIP2AQ14689 1571 aa13.92□□□□□ -0.18
NFIA-213ENST00000493627 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
NFIA-213ENST00000493627 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.92□□□□□ -0.18
NFIA-213ENST00000493627 MSH6P52701 1360 aa13.92□□□□□ -0.18
NFIA-213ENST00000493627 ROBO1Q9Y6N7 1651 aa13.91□□□□□ -0.18
NFIA-213ENST00000493627 ADAMTS13Q76LX8 1427 aa13.91□□□□□ -0.18
NFIA-213ENST00000493627 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
NFIA-213ENST00000493627 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
NFIA-213ENST00000493627 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
NFIA-213ENST00000493627 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
NFIA-213ENST00000493627 PIK3R4Q99570 1358 aa13.87□□□□□ -0.19
NFIA-213ENST00000493627 TRPM2O94759 1503 aa13.87□□□□□ -0.19
NFIA-213ENST00000493627 NAIPQ13075 1403 aa13.86□□□□□ -0.19
NFIA-213ENST00000493627 NCOA3Q9Y6Q9 1424 aa13.86□□□□□ -0.19
NFIA-213ENST00000493627 SETBP1Q9Y6X0 1596 aa13.85□□□□□ -0.19
NFIA-213ENST00000493627 CLTCL1P53675 1640 aa13.84□□□□□ -0.19
NFIA-213ENST00000493627 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
NFIA-213ENST00000493627 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
NFIA-213ENST00000493627 C14orf37Q86TY3 774 aa13.83□□□□□ -0.2
NFIA-213ENST00000493627 SLAIN2Q9P270 581 aa13.83□□□□□ -0.2
NFIA-213ENST00000493627 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
NFIA-213ENST00000493627 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
NFIA-213ENST00000493627 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
NFIA-213ENST00000493627 NEXMIFQ5QGS0 1516 aa13.81□□□□□ -0.2
NFIA-213ENST00000493627 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
NFIA-213ENST00000493627 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
NFIA-213ENST00000493627 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
NFIA-213ENST00000493627 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
NFIA-213ENST00000493627 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
NFIA-213ENST00000493627 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
NFIA-213ENST00000493627 C19orf44Q9H6X5 657 aa13.79□□□□□ -0.2
NFIA-213ENST00000493627 JCADQ9P266 1359 aa13.79□□□□□ -0.2
NFIA-213ENST00000493627 ATF3P18847 181 aa13.78□□□□□ -0.2
NFIA-213ENST00000493627 DCCP43146 1447 aa13.78□□□□□ -0.2
NFIA-213ENST00000493627 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
NFIA-213ENST00000493627 METP08581 1390 aa13.77□□□□□ -0.21
NFIA-213ENST00000493627 TRIM52Q96A61 297 aa13.75□□□□□ -0.21
NFIA-213ENST00000493627 KIF1BO60333 1816 aa13.75□□□□□ -0.21
NFIA-213ENST00000493627 ASXL1Q8IXJ9 1541 aa13.74□□□□□ -0.21
NFIA-213ENST00000493627 MST1RQ04912 1400 aa13.73□□□□□ -0.21
NFIA-213ENST00000493627 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
NFIA-213ENST00000493627 LRP6O75581 1613 aa13.73□□□□□ -0.21
NFIA-213ENST00000493627 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
NFIA-213ENST00000493627 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
NFIA-213ENST00000493627 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
NFIA-213ENST00000493627 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
NFIA-213ENST00000493627 SHPRHQ149N8 1683 aa13.72□□□□□ -0.21
NFIA-213ENST00000493627 SPATA31A6Q5VVP1 1343 aa13.71□□□□□ -0.21
NFIA-213ENST00000493627 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.21
NFIA-213ENST00000493627 PTCH1Q13635 1447 aa13.71□□□□□ -0.22
NFIA-213ENST00000493627 NHSL1Q5SYE7 1610 aa13.69□□□□□ -0.22
NFIA-213ENST00000493627 VGFO15240 615 aaPredicted RBP13.69□□□□□ -0.22
NFIA-213ENST00000493627 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
NFIA-213ENST00000493627 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
NFIA-213ENST00000493627 PPLO60437 1756 aa13.68□□□□□ -0.22
NFIA-213ENST00000493627 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
NFIA-213ENST00000493627 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
NFIA-213ENST00000493627 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
NFIA-213ENST00000493627 MEX3CQ5U5Q3 659 aaKnown RBP13.66□□□□□ -0.22
NFIA-213ENST00000493627 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
NFIA-213ENST00000493627 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
NFIA-213ENST00000493627 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
NFIA-213ENST00000493627 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
NFIA-213ENST00000493627 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
NFIA-213ENST00000493627 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
NFIA-213ENST00000493627 NUTM2AQ8IVF1 878 aaPredicted RBP13.62□□□□□ -0.23
NFIA-213ENST00000493627 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
NFIA-213ENST00000493627 LAMC1P11047 1609 aa13.61□□□□□ -0.23
NFIA-213ENST00000493627 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
NFIA-213ENST00000493627 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
NFIA-213ENST00000493627 MPHOSPH9Q99550 1183 aa13.61□□□□□ -0.23
NFIA-213ENST00000493627 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
NFIA-213ENST00000493627 ADGRF5Q8IZF2 1346 aa13.61□□□□□ -0.23
NFIA-213ENST00000493627 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
NFIA-213ENST00000493627 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
NFIA-213ENST00000493627 TECPR2O15040 1411 aa13.59□□□□□ -0.23
NFIA-213ENST00000493627 KCNA4P22459 653 aa13.59□□□□□ -0.23
NFIA-213ENST00000493627 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
NFIA-213ENST00000493627 PIK3C2GO75747 1445 aa13.58□□□□□ -0.24
NFIA-213ENST00000493627 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms