RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 UNC13BO14795 1591 aa20.74■□□□□ 0.91
TRIM50-204ENST00000493498 BCANQ96GW7 911 aa20.74■□□□□ 0.91
TRIM50-204ENST00000493498 SLC26A8Q96RN1 970 aa20.74■□□□□ 0.91
TRIM50-204ENST00000493498 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
TRIM50-204ENST00000493498 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
TRIM50-204ENST00000493498 ROCK1Q13464 1354 aa20.72■□□□□ 0.91
TRIM50-204ENST00000493498 MYO5BQ9ULV0 1848 aa20.71■□□□□ 0.91
TRIM50-204ENST00000493498 ZFYVE9O95405 1425 aa20.71■□□□□ 0.91
TRIM50-204ENST00000493498 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
TRIM50-204ENST00000493498 MSH6P52701 1360 aa20.71■□□□□ 0.91
TRIM50-204ENST00000493498 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.7■□□□□ 0.9
TRIM50-204ENST00000493498 TMEM131LA2VDJ0 1609 aa20.7■□□□□ 0.9
TRIM50-204ENST00000493498 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
TRIM50-204ENST00000493498 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
TRIM50-204ENST00000493498 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
TRIM50-204ENST00000493498 IQGAP3Q86VI3 1631 aa20.67■□□□□ 0.9
TRIM50-204ENST00000493498 NCOA3Q9Y6Q9 1424 aa20.66■□□□□ 0.9
TRIM50-204ENST00000493498 E9PCH4 1651 aa20.66■□□□□ 0.9
TRIM50-204ENST00000493498 DIP2AQ14689 1571 aa20.65■□□□□ 0.9
TRIM50-204ENST00000493498 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
TRIM50-204ENST00000493498 PIK3R4Q99570 1358 aa20.62■□□□□ 0.89
TRIM50-204ENST00000493498 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
TRIM50-204ENST00000493498 SLAIN2Q9P270 581 aa20.61■□□□□ 0.89
TRIM50-204ENST00000493498 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
TRIM50-204ENST00000493498 NUP155O75694 1391 aa20.59■□□□□ 0.89
TRIM50-204ENST00000493498 PHLPP1O60346 1717 aa20.58■□□□□ 0.89
TRIM50-204ENST00000493498 RGS17Q9UGC6 210 aaPredicted RBP20.57■□□□□ 0.88
TRIM50-204ENST00000493498 ADAMTS13Q76LX8 1427 aa20.56■□□□□ 0.88
TRIM50-204ENST00000493498 C14orf37Q86TY3 774 aa20.56■□□□□ 0.88
TRIM50-204ENST00000493498 TRPM2O94759 1503 aa20.56■□□□□ 0.88
TRIM50-204ENST00000493498 JCADQ9P266 1359 aa20.56■□□□□ 0.88
TRIM50-204ENST00000493498 CADPS2Q86UW7 1296 aa20.55■□□□□ 0.88
TRIM50-204ENST00000493498 C19orf44Q9H6X5 657 aa20.53■□□□□ 0.88
TRIM50-204ENST00000493498 SPHKAPQ2M3C7 1700 aa20.53■□□□□ 0.88
TRIM50-204ENST00000493498 ATF3P18847 181 aa20.52■□□□□ 0.88
TRIM50-204ENST00000493498 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.51■□□□□ 0.87
TRIM50-204ENST00000493498 ITGAEP38570 1179 aa20.5■□□□□ 0.87
TRIM50-204ENST00000493498 COL16A1Q07092 1604 aaPredicted RBP20.49■□□□□ 0.87
TRIM50-204ENST00000493498 NUTM2DQ5VT03 806 aaPredicted RBP20.49■□□□□ 0.87
TRIM50-204ENST00000493498 DCCP43146 1447 aa20.48■□□□□ 0.87
TRIM50-204ENST00000493498 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
TRIM50-204ENST00000493498 SPATA31A6Q5VVP1 1343 aa20.48■□□□□ 0.87
TRIM50-204ENST00000493498 SETBP1Q9Y6X0 1596 aa20.47■□□□□ 0.87
TRIM50-204ENST00000493498 AMOTL2Q9Y2J4 779 aa20.47■□□□□ 0.87
TRIM50-204ENST00000493498 POTEAQ6S8J7 498 aa20.46■□□□□ 0.87
TRIM50-204ENST00000493498 SHPRHQ149N8 1683 aa20.44■□□□□ 0.86
TRIM50-204ENST00000493498 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
TRIM50-204ENST00000493498 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
TRIM50-204ENST00000493498 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
TRIM50-204ENST00000493498 PTPRUQ92729 1446 aa20.42■□□□□ 0.86
TRIM50-204ENST00000493498 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
TRIM50-204ENST00000493498 KIF1BO60333 1816 aa20.41■□□□□ 0.86
TRIM50-204ENST00000493498 MEX3CQ5U5Q3 659 aaKnown RBP20.4■□□□□ 0.86
TRIM50-204ENST00000493498 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
TRIM50-204ENST00000493498 ZNF772Q68DY9 489 aaPredicted RBP20.39■□□□□ 0.85
TRIM50-204ENST00000493498 BRINP3Q76B58 766 aa20.37■□□□□ 0.85
TRIM50-204ENST00000493498 CLTCL1P53675 1640 aa20.37■□□□□ 0.85
TRIM50-204ENST00000493498 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
TRIM50-204ENST00000493498 LRP6O75581 1613 aa20.35■□□□□ 0.85
TRIM50-204ENST00000493498 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
TRIM50-204ENST00000493498 ASXL1Q8IXJ9 1541 aa20.35■□□□□ 0.85
TRIM50-204ENST00000493498 MST1RQ04912 1400 aa20.34■□□□□ 0.85
TRIM50-204ENST00000493498 NAIPQ13075 1403 aa20.34■□□□□ 0.85
TRIM50-204ENST00000493498 ADGRL3Q9HAR2 1447 aa20.34■□□□□ 0.85
TRIM50-204ENST00000493498 METP08581 1390 aa20.34■□□□□ 0.85
TRIM50-204ENST00000493498 NHSL1Q5SYE7 1610 aa20.33■□□□□ 0.84
TRIM50-204ENST00000493498 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.84
TRIM50-204ENST00000493498 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
TRIM50-204ENST00000493498 SETD1AO15047 1707 aaKnown RBP20.3■□□□□ 0.84
TRIM50-204ENST00000493498 LRRC59Q96AG4 307 aaKnown RBP20.3■□□□□ 0.84
TRIM50-204ENST00000493498 RPGRIP1LQ68CZ1 1315 aa20.29■□□□□ 0.84
TRIM50-204ENST00000493498 HFM1A2PYH4 1435 aa20.28■□□□□ 0.84
TRIM50-204ENST00000493498 PTCH1Q13635 1447 aa20.28■□□□□ 0.84
TRIM50-204ENST00000493498 NALCNQ8IZF0 1738 aa20.28■□□□□ 0.84
TRIM50-204ENST00000493498 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
TRIM50-204ENST00000493498 PRAG1Q86YV5 1406 aa20.26■□□□□ 0.83
TRIM50-204ENST00000493498 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
TRIM50-204ENST00000493498 RXRBP28702 533 aa20.25■□□□□ 0.83
TRIM50-204ENST00000493498 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
TRIM50-204ENST00000493498 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
TRIM50-204ENST00000493498 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
TRIM50-204ENST00000493498 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
TRIM50-204ENST00000493498 PPLO60437 1756 aa20.22■□□□□ 0.83
TRIM50-204ENST00000493498 LAMC1P11047 1609 aa20.22■□□□□ 0.83
TRIM50-204ENST00000493498 C1orf167Q5SNV9 1468 aa20.21■□□□□ 0.83
TRIM50-204ENST00000493498 AFF2P51816 1311 aa20.2■□□□□ 0.82
TRIM50-204ENST00000493498 PNPLA6Q8IY17 1366 aa20.2■□□□□ 0.82
TRIM50-204ENST00000493498 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
TRIM50-204ENST00000493498 UPF1Q92900 1129 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRIM50-204ENST00000493498 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
TRIM50-204ENST00000493498 C8orf37Q96NL8 207 aa20.15■□□□□ 0.82
TRIM50-204ENST00000493498 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
TRIM50-204ENST00000493498 SOS2Q07890 1332 aaPredicted RBP20.14■□□□□ 0.81
TRIM50-204ENST00000493498 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.81
TRIM50-204ENST00000493498 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
TRIM50-204ENST00000493498 RBM6P78332 1123 aaKnown RBP20.13■□□□□ 0.81
TRIM50-204ENST00000493498 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
TRIM50-204ENST00000493498 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
TRIM50-204ENST00000493498 NGLY1Q96IV0 654 aa20.11■□□□□ 0.81
TRIM50-204ENST00000493498 QTRT2Q9H974 415 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms