RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
RFC2-210ENST00000493156 PLEKHG1Q9ULL1 1385 aa29.94■■■□□ 2.38
RFC2-210ENST00000493156 HSPA1LP34931 641 aa29.94■■■□□ 2.38
RFC2-210ENST00000493156 NKTRP30414 1462 aaKnown RBP29.92■■■□□ 2.38
RFC2-210ENST00000493156 KCNA6P17658 529 aa29.91■■■□□ 2.38
RFC2-210ENST00000493156 SLC26A8Q96RN1 970 aa29.91■■■□□ 2.38
RFC2-210ENST00000493156 SPHKAPQ2M3C7 1700 aa29.91■■■□□ 2.38
RFC2-210ENST00000493156 NAIPQ13075 1403 aa29.9■■■□□ 2.38
RFC2-210ENST00000493156 HDGFP51858 240 aaKnown RBP29.87■■■□□ 2.37
RFC2-210ENST00000493156 TMEM94Q12767 1356 aa29.86■■■□□ 2.37
RFC2-210ENST00000493156 CHD2O14647 1828 aaKnown RBP29.85■■■□□ 2.37
RFC2-210ENST00000493156 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.84■■■□□ 2.37
RFC2-210ENST00000493156 DIP2AQ14689 1571 aa29.83■■■□□ 2.37
RFC2-210ENST00000493156 PPP1R15AO75807 674 aaPredicted RBP29.83■■■□□ 2.37
RFC2-210ENST00000493156 ILDR2Q71H61 639 aa29.83■■■□□ 2.37
RFC2-210ENST00000493156 CHGAP10645 457 aaKnown RBP29.82■■■□□ 2.36
RFC2-210ENST00000493156 HFM1A2PYH4 1435 aa29.81■■■□□ 2.36
RFC2-210ENST00000493156 MED1Q15648 1581 aaPredicted RBP29.81■■■□□ 2.36
RFC2-210ENST00000493156 ADAMTS13Q76LX8 1427 aa29.8■■■□□ 2.36
RFC2-210ENST00000493156 BCANQ96GW7 911 aa29.79■■■□□ 2.36
RFC2-210ENST00000493156 TRPM2O94759 1503 aa29.78■■■□□ 2.36
RFC2-210ENST00000493156 TBX22Q9Y458 520 aa29.78■■■□□ 2.36
RFC2-210ENST00000493156 PROSER2Q86WR7 435 aaPredicted RBP29.77■■■□□ 2.36
RFC2-210ENST00000493156 CLTCL1P53675 1640 aa29.75■■■□□ 2.35
RFC2-210ENST00000493156 FAM135BQ49AJ0 1406 aa29.74■■■□□ 2.35
RFC2-210ENST00000493156 PIK3R4Q99570 1358 aa29.74■■■□□ 2.35
RFC2-210ENST00000493156 SENP3Q9H4L4 574 aaPredicted RBP29.72■■■□□ 2.35
RFC2-210ENST00000493156 NRXN3Q9Y4C0 1643 aa29.71■■■□□ 2.35
RFC2-210ENST00000493156 SETBP1Q9Y6X0 1596 aa29.7■■■□□ 2.35
RFC2-210ENST00000493156 NUTM2DQ5VT03 806 aaPredicted RBP29.7■■■□□ 2.35
RFC2-210ENST00000493156 RBM33Q96EV2 1170 aaKnown RBP29.69■■■□□ 2.34
RFC2-210ENST00000493156 NCOA3Q9Y6Q9 1424 aa29.69■■■□□ 2.34
RFC2-210ENST00000493156 MSH6P52701 1360 aa29.68■■■□□ 2.34
RFC2-210ENST00000493156 ROBO1Q9Y6N7 1651 aa29.68■■■□□ 2.34
RFC2-210ENST00000493156 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
RFC2-210ENST00000493156 KIF1BO60333 1816 aa29.65■■■□□ 2.34
RFC2-210ENST00000493156 SOCS7O14512 581 aa29.62■■■□□ 2.33
RFC2-210ENST00000493156 XRN1Q8IZH2 1706 aaKnown RBP29.62■■■□□ 2.33
RFC2-210ENST00000493156 PTPRUQ92729 1446 aa29.62■■■□□ 2.33
RFC2-210ENST00000493156 TRIM52Q96A61 297 aa29.59■■■□□ 2.33
RFC2-210ENST00000493156 ZNF326Q5BKZ1 582 aaKnown RBP29.58■■■□□ 2.33
RFC2-210ENST00000493156 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.57■■■□□ 2.32
RFC2-210ENST00000493156 SLC4A1APQ9BWU0 796 aaKnown RBP29.54■■■□□ 2.32
RFC2-210ENST00000493156 SLAIN2Q9P270 581 aa29.54■■■□□ 2.32
RFC2-210ENST00000493156 AMOTL2Q9Y2J4 779 aa29.53■■■□□ 2.32
RFC2-210ENST00000493156 METP08581 1390 aa29.51■■■□□ 2.31
RFC2-210ENST00000493156 SETD1AO15047 1707 aaKnown RBP29.49■■■□□ 2.31
RFC2-210ENST00000493156 PHLPP1O60346 1717 aa29.49■■■□□ 2.31
RFC2-210ENST00000493156 C19orf44Q9H6X5 657 aa29.48■■■□□ 2.31
RFC2-210ENST00000493156 DCCP43146 1447 aa29.47■■■□□ 2.31
RFC2-210ENST00000493156 PPLO60437 1756 aa29.47■■■□□ 2.31
RFC2-210ENST00000493156 C14orf37Q86TY3 774 aa29.46■■■□□ 2.31
RFC2-210ENST00000493156 CADPS2Q86UW7 1296 aa29.46■■■□□ 2.31
RFC2-210ENST00000493156 PHF23Q9BUL5 403 aaPredicted RBP29.46■■■□□ 2.31
RFC2-210ENST00000493156 COL16A1Q07092 1604 aaPredicted RBP29.45■■■□□ 2.3
RFC2-210ENST00000493156 RPGRIP1LQ68CZ1 1315 aa29.44■■■□□ 2.3
RFC2-210ENST00000493156 AHDC1Q5TGY3 1603 aaPredicted RBP29.42■■■□□ 2.3
RFC2-210ENST00000493156 VGFO15240 615 aaPredicted RBP29.41■■■□□ 2.3
RFC2-210ENST00000493156 ATF3P18847 181 aa29.41■■■□□ 2.3
RFC2-210ENST00000493156 PRAG1Q86YV5 1406 aa29.39■■■□□ 2.3
RFC2-210ENST00000493156 NALCNQ8IZF0 1738 aa29.38■■■□□ 2.29
RFC2-210ENST00000493156 FOXD1Q16676 465 aa29.38■■■□□ 2.29
RFC2-210ENST00000493156 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
RFC2-210ENST00000493156 ADGRL3Q9HAR2 1447 aa29.37■■■□□ 2.29
RFC2-210ENST00000493156 PTCH1Q13635 1447 aa29.37■■■□□ 2.29
RFC2-210ENST00000493156 MPHOSPH9Q99550 1183 aa29.36■■■□□ 2.29
RFC2-210ENST00000493156 ACIN1Q9UKV3 1341 aaKnown RBP29.36■■■□□ 2.29
RFC2-210ENST00000493156 JCADQ9P266 1359 aa29.36■■■□□ 2.29
RFC2-210ENST00000493156 SPATA31E1Q6ZUB1 1445 aa29.36■■■□□ 2.29
RFC2-210ENST00000493156 IFT172Q9UG01 1749 aa29.35■■■□□ 2.29
RFC2-210ENST00000493156 MST1RQ04912 1400 aa29.35■■■□□ 2.29
RFC2-210ENST00000493156 RGS17Q9UGC6 210 aaPredicted RBP29.33■■■□□ 2.29
RFC2-210ENST00000493156 SETD5Q9C0A6 1442 aa29.33■■■□□ 2.29
RFC2-210ENST00000493156 ASXL1Q8IXJ9 1541 aa29.31■■■□□ 2.28
RFC2-210ENST00000493156 BRINP3Q76B58 766 aa29.3■■■□□ 2.28
RFC2-210ENST00000493156 SHPRHQ149N8 1683 aa29.29■■■□□ 2.28
RFC2-210ENST00000493156 NHSL1Q5SYE7 1610 aa29.29■■■□□ 2.28
RFC2-210ENST00000493156 ROBO2Q9HCK4 1378 aa29.26■■■□□ 2.28
RFC2-210ENST00000493156 ANKRD30BQ9BXX2 1392 aa29.25■■■□□ 2.27
RFC2-210ENST00000493156 ADGRF5Q8IZF2 1346 aa29.22■■■□□ 2.27
RFC2-210ENST00000493156 RAB3GAP2Q9H2M9 1393 aa29.22■■■□□ 2.27
RFC2-210ENST00000493156 SPATA31A6Q5VVP1 1343 aa29.21■■■□□ 2.27
RFC2-210ENST00000493156 LRP6O75581 1613 aa29.21■■■□□ 2.27
RFC2-210ENST00000493156 PIK3C2GO75747 1445 aa29.19■■■□□ 2.26
RFC2-210ENST00000493156 C1orf167Q5SNV9 1468 aa29.18■■■□□ 2.26
RFC2-210ENST00000493156 RGL3Q3MIN7 710 aa29.18■■■□□ 2.26
RFC2-210ENST00000493156 LAMC1P11047 1609 aa29.18■■■□□ 2.26
RFC2-210ENST00000493156 TECPR2O15040 1411 aa29.18■■■□□ 2.26
RFC2-210ENST00000493156 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
RFC2-210ENST00000493156 POTEAQ6S8J7 498 aa29.15■■■□□ 2.26
RFC2-210ENST00000493156 CDC42BPGQ6DT37 1551 aa29.14■■■□□ 2.26
RFC2-210ENST00000493156 MYOM2P54296 1465 aa29.12■■■□□ 2.25
RFC2-210ENST00000493156 NRXN1Q9ULB1 1477 aa29.12■■■□□ 2.25
RFC2-210ENST00000493156 LRPPRCP42704 1394 aaKnown RBP29.12■■■□□ 2.25
RFC2-210ENST00000493156 ABCC11Q96J66 1382 aa29.08■■■□□ 2.25
RFC2-210ENST00000493156 LRRC59Q96AG4 307 aaKnown RBP29.06■■■□□ 2.24
RFC2-210ENST00000493156 DDX17Q92841 729 aaKnown RBP29.04■■■□□ 2.24
RFC2-210ENST00000493156 YTHDC2Q9H6S0 1430 aaKnown RBP29.03■■■□□ 2.24
RFC2-210ENST00000493156 PNPLA6Q8IY17 1366 aa29.03■■■□□ 2.24
RFC2-210ENST00000493156 HRCP23327 699 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms