RNA–Protein interactions for RNA: ENST00000493104.5

MRPL38-213, Transcript of mitochondrial ribosomal protein L38, human

TSL 2

Gene MRPL38, Length 1,116 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL38-213	ENST00000493104	KCNA6	P17658	529 aa		29.19	■■■□□ 2.26
MRPL38-213	ENST00000493104	HDGF	P51858	240 aa	Known RBP	29.19	■■■□□ 2.26
MRPL38-213	ENST00000493104	PLEKHG1	Q9ULL1	1385 aa		29.18	■■■□□ 2.26
MRPL38-213	ENST00000493104	SCAF1	Q9H7N4	1312 aa	Known RBP	29.17	■■■□□ 2.26
MRPL38-213	ENST00000493104	CHGA	P10645	457 aa	Known RBP	29.14	■■■□□ 2.26
MRPL38-213	ENST00000493104	HSPA1L	P34931	641 aa		29.14	■■■□□ 2.26
MRPL38-213	ENST00000493104	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
MRPL38-213	ENST00000493104	SPHKAP	Q2M3C7	1700 aa		29.14	■■■□□ 2.25
MRPL38-213	ENST00000493104	DISP3	Q9P2K9	1392 aa		29.13	■■■□□ 2.25
MRPL38-213	ENST00000493104	HFM1	A2PYH4	1435 aa		29.13	■■■□□ 2.25
MRPL38-213	ENST00000493104	NWD1	Q149M9	1564 aa		29.13	■■■□□ 2.25
MRPL38-213	ENST00000493104	PPP1R15A	O75807	674 aa	Predicted RBP	29.1	■■■□□ 2.25
MRPL38-213	ENST00000493104	CHD2	O14647	1828 aa	Known RBP	29.09	■■■□□ 2.25
MRPL38-213	ENST00000493104	BCAN	Q96GW7	911 aa		29.09	■■■□□ 2.25
MRPL38-213	ENST00000493104	TBX22	Q9Y458	520 aa		29.08	■■■□□ 2.25
MRPL38-213	ENST00000493104	TMEM94	Q12767	1356 aa		29.08	■■■□□ 2.25
MRPL38-213	ENST00000493104	NKTR	P30414	1462 aa	Known RBP	29.08	■■■□□ 2.25
MRPL38-213	ENST00000493104	ADAMTS13	Q76LX8	1427 aa		29.05	■■■□□ 2.24
MRPL38-213	ENST00000493104	PROSER2	Q86WR7	435 aa	Predicted RBP	29.05	■■■□□ 2.24
MRPL38-213	ENST00000493104	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.03	■■■□□ 2.24
MRPL38-213	ENST00000493104	SENP3	Q9H4L4	574 aa	Predicted RBP	29.03	■■■□□ 2.24
MRPL38-213	ENST00000493104	DIP2A	Q14689	1571 aa		29.01	■■■□□ 2.24
MRPL38-213	ENST00000493104	TRPM2	O94759	1503 aa		29.01	■■■□□ 2.23
MRPL38-213	ENST00000493104	CLTCL1	P53675	1640 aa		29	■■■□□ 2.23
MRPL38-213	ENST00000493104	PIK3R4	Q99570	1358 aa		28.99	■■■□□ 2.23
MRPL38-213	ENST00000493104	ILDR2	Q71H61	639 aa		28.98	■■■□□ 2.23
MRPL38-213	ENST00000493104	TRIM52	Q96A61	297 aa		28.98	■■■□□ 2.23
MRPL38-213	ENST00000493104	RBM33	Q96EV2	1170 aa	Known RBP	28.98	■■■□□ 2.23
MRPL38-213	ENST00000493104	FAM135B	Q49AJ0	1406 aa		28.96	■■■□□ 2.23
MRPL38-213	ENST00000493104	KIF1B	O60333	1816 aa		28.93	■■■□□ 2.22
MRPL38-213	ENST00000493104	NRXN3	Q9Y4C0	1643 aa		28.93	■■■□□ 2.22
MRPL38-213	ENST00000493104	NCOA3	Q9Y6Q9	1424 aa		28.93	■■■□□ 2.22
MRPL38-213	ENST00000493104	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.92	■■■□□ 2.22
MRPL38-213	ENST00000493104	SETBP1	Q9Y6X0	1596 aa		28.92	■■■□□ 2.22
MRPL38-213	ENST00000493104	ZNF326	Q5BKZ1	582 aa	Known RBP	28.91	■■■□□ 2.22
MRPL38-213	ENST00000493104	MSH6	P52701	1360 aa		28.9	■■■□□ 2.22
MRPL38-213	ENST00000493104	MED1	Q15648	1581 aa	Predicted RBP	28.9	■■■□□ 2.22
MRPL38-213	ENST00000493104	NEXMIF	Q5QGS0	1516 aa		28.89	■■■□□ 2.22
MRPL38-213	ENST00000493104	PTPRU	Q92729	1446 aa		28.88	■■■□□ 2.21
MRPL38-213	ENST00000493104	AMOTL2	Q9Y2J4	779 aa		28.85	■■■□□ 2.21
MRPL38-213	ENST00000493104	ROBO1	Q9Y6N7	1651 aa		28.85	■■■□□ 2.21
MRPL38-213	ENST00000493104	SLAIN2	Q9P270	581 aa		28.82	■■■□□ 2.2
MRPL38-213	ENST00000493104	XRN1	Q8IZH2	1706 aa	Known RBP	28.81	■■■□□ 2.2
MRPL38-213	ENST00000493104	MET	P08581	1390 aa		28.79	■■■□□ 2.2
MRPL38-213	ENST00000493104	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.78	■■■□□ 2.2
MRPL38-213	ENST00000493104	C19orf44	Q9H6X5	657 aa		28.78	■■■□□ 2.2
MRPL38-213	ENST00000493104	RPGRIP1L	Q68CZ1	1315 aa		28.77	■■■□□ 2.2
MRPL38-213	ENST00000493104	MPHOSPH9	Q99550	1183 aa		28.77	■■■□□ 2.2
MRPL38-213	ENST00000493104	VGF	O15240	615 aa	Predicted RBP	28.76	■■■□□ 2.19
MRPL38-213	ENST00000493104	FOXD1	Q16676	465 aa		28.76	■■■□□ 2.19
MRPL38-213	ENST00000493104	ACIN1	Q9UKV3	1341 aa	Known RBP	28.74	■■■□□ 2.19
MRPL38-213	ENST00000493104	SOCS7	O14512	581 aa		28.74	■■■□□ 2.19
MRPL38-213	ENST00000493104	C14orf37	Q86TY3	774 aa		28.73	■■■□□ 2.19
MRPL38-213	ENST00000493104	CADPS2	Q86UW7	1296 aa		28.73	■■■□□ 2.19
MRPL38-213	ENST00000493104	PPL	O60437	1756 aa		28.73	■■■□□ 2.19
MRPL38-213	ENST00000493104	SETD5	Q9C0A6	1442 aa		28.71	■■■□□ 2.19
MRPL38-213	ENST00000493104	SETD1A	O15047	1707 aa	Known RBP	28.71	■■■□□ 2.19
MRPL38-213	ENST00000493104	ATF3	P18847	181 aa		28.69	■■■□□ 2.18
MRPL38-213	ENST00000493104	DCC	P43146	1447 aa		28.69	■■■□□ 2.18
MRPL38-213	ENST00000493104	CCDC144A	A2RUR9	1427 aa		28.68	■■■□□ 2.18
MRPL38-213	ENST00000493104	PHLPP1	O60346	1717 aa		28.67	■■■□□ 2.18
MRPL38-213	ENST00000493104	SPATA31E1	Q6ZUB1	1445 aa		28.66	■■■□□ 2.18
MRPL38-213	ENST00000493104	PHF23	Q9BUL5	403 aa	Predicted RBP	28.63	■■■□□ 2.17
MRPL38-213	ENST00000493104	PRAG1	Q86YV5	1406 aa		28.61	■■■□□ 2.17
MRPL38-213	ENST00000493104	COL16A1	Q07092	1604 aa	Predicted RBP	28.61	■■■□□ 2.17
MRPL38-213	ENST00000493104	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.6	■■■□□ 2.17
MRPL38-213	ENST00000493104	RAB3GAP2	Q9H2M9	1393 aa		28.6	■■■□□ 2.17
MRPL38-213	ENST00000493104	IFT172	Q9UG01	1749 aa		28.6	■■■□□ 2.17
MRPL38-213	ENST00000493104	PTCH1	Q13635	1447 aa		28.6	■■■□□ 2.17
MRPL38-213	ENST00000493104	ADGRL3	Q9HAR2	1447 aa		28.6	■■■□□ 2.17
MRPL38-213	ENST00000493104	MST1R	Q04912	1400 aa		28.58	■■■□□ 2.17
MRPL38-213	ENST00000493104	NALCN	Q8IZF0	1738 aa		28.57	■■■□□ 2.16
MRPL38-213	ENST00000493104	RGL3	Q3MIN7	710 aa		28.57	■■■□□ 2.16
MRPL38-213	ENST00000493104	BRINP3	Q76B58	766 aa		28.57	■■■□□ 2.16
MRPL38-213	ENST00000493104	RGS17	Q9UGC6	210 aa	Predicted RBP	28.57	■■■□□ 2.16
MRPL38-213	ENST00000493104	ADGRF5	Q8IZF2	1346 aa		28.57	■■■□□ 2.16
MRPL38-213	ENST00000493104	JCAD	Q9P266	1359 aa		28.57	■■■□□ 2.16
MRPL38-213	ENST00000493104	ANKRD30B	Q9BXX2	1392 aa		28.56	■■■□□ 2.16
MRPL38-213	ENST00000493104	ROBO2	Q9HCK4	1378 aa		28.55	■■■□□ 2.16
MRPL38-213	ENST00000493104	ASXL1	Q8IXJ9	1541 aa		28.5	■■■□□ 2.15
MRPL38-213	ENST00000493104	HRC	P23327	699 aa		28.48	■■■□□ 2.15
MRPL38-213	ENST00000493104	PIK3C2G	O75747	1445 aa		28.47	■■■□□ 2.15
MRPL38-213	ENST00000493104	NHSL1	Q5SYE7	1610 aa		28.47	■■■□□ 2.15
MRPL38-213	ENST00000493104	SHPRH	Q149N8	1683 aa		28.46	■■■□□ 2.15
MRPL38-213	ENST00000493104	SPATA31A6	Q5VVP1	1343 aa		28.44	■■■□□ 2.14
MRPL38-213	ENST00000493104	TECPR2	O15040	1411 aa		28.43	■■■□□ 2.14
MRPL38-213	ENST00000493104	C1orf167	Q5SNV9	1468 aa		28.43	■■■□□ 2.14
MRPL38-213	ENST00000493104	NRXN1	Q9ULB1	1477 aa		28.41	■■■□□ 2.14
MRPL38-213	ENST00000493104	LRPPRC	P42704	1394 aa	Known RBP	28.41	■■■□□ 2.14
MRPL38-213	ENST00000493104	ABCC11	Q96J66	1382 aa		28.4	■■■□□ 2.14
MRPL38-213	ENST00000493104	LRP6	O75581	1613 aa		28.39	■■■□□ 2.13
MRPL38-213	ENST00000493104	MYOM2	P54296	1465 aa		28.39	■■■□□ 2.13
MRPL38-213	ENST00000493104	KNDC1	Q76NI1	1749 aa		28.38	■■■□□ 2.13
MRPL38-213	ENST00000493104	TMEM132E	Q6IEE7	984 aa		28.38	■■■□□ 2.13
MRPL38-213	ENST00000493104	POTEA	Q6S8J7	498 aa		28.38	■■■□□ 2.13
MRPL38-213	ENST00000493104	C14orf93	Q9H972	538 aa	Known RBP	28.38	■■■□□ 2.13
MRPL38-213	ENST00000493104	LAMC1	P11047	1609 aa		28.38	■■■□□ 2.13
MRPL38-213	ENST00000493104	LRRC59	Q96AG4	307 aa	Known RBP	28.35	■■■□□ 2.13
MRPL38-213	ENST00000493104	STK26	Q9P289	416 aa		28.35	■■■□□ 2.13
MRPL38-213	ENST00000493104	CDC42BPG	Q6DT37	1551 aa		28.35	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms