RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
USP34-218ENST00000490552 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
USP34-218ENST00000490552 KIAA1210Q9ULL0 1709 aa13.28□□□□□ -0.28
USP34-218ENST00000490552 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
USP34-218ENST00000490552 NLRP1Q9C000 1473 aa13.28□□□□□ -0.28
USP34-218ENST00000490552 USP47Q96K76 1375 aa13.27□□□□□ -0.28
USP34-218ENST00000490552 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.28
USP34-218ENST00000490552 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.28
USP34-218ENST00000490552 PPLO60437 1756 aa13.27□□□□□ -0.29
USP34-218ENST00000490552 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
USP34-218ENST00000490552 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
USP34-218ENST00000490552 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
USP34-218ENST00000490552 A2ML1A8K2U0 1454 aa13.24□□□□□ -0.29
USP34-218ENST00000490552 C3P01024 1663 aa13.24□□□□□ -0.29
USP34-218ENST00000490552 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
USP34-218ENST00000490552 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP34-218ENST00000490552 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
USP34-218ENST00000490552 ADGRF5Q8IZF2 1346 aa13.24□□□□□ -0.29
USP34-218ENST00000490552 EIF3AQ14152 1382 aaKnown RBP13.23□□□□□ -0.29
USP34-218ENST00000490552 C14orf93Q9H972 538 aaKnown RBP13.22□□□□□ -0.29
USP34-218ENST00000490552 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
USP34-218ENST00000490552 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
USP34-218ENST00000490552 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.3
USP34-218ENST00000490552 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
USP34-218ENST00000490552 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
USP34-218ENST00000490552 CFAP70Q5T0N1 1121 aa13.19□□□□□ -0.3
USP34-218ENST00000490552 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
USP34-218ENST00000490552 MYO5BQ9ULV0 1848 aa13.18□□□□□ -0.3
USP34-218ENST00000490552 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
USP34-218ENST00000490552 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
USP34-218ENST00000490552 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
USP34-218ENST00000490552 UBR1Q8IWV7 1749 aa13.17□□□□□ -0.3
USP34-218ENST00000490552 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
USP34-218ENST00000490552 IQGAP1P46940 1657 aa13.17□□□□□ -0.3
USP34-218ENST00000490552 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
USP34-218ENST00000490552 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
USP34-218ENST00000490552 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
USP34-218ENST00000490552 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
USP34-218ENST00000490552 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
USP34-218ENST00000490552 CDCA8Q53HL2 280 aa13.15□□□□□ -0.31
USP34-218ENST00000490552 EID1Q9Y6B2 187 aa13.15□□□□□ -0.31
USP34-218ENST00000490552 SLIT1O75093 1534 aa13.14□□□□□ -0.31
USP34-218ENST00000490552 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
USP34-218ENST00000490552 TMF1P82094 1093 aa13.13□□□□□ -0.31
USP34-218ENST00000490552 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
USP34-218ENST00000490552 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
USP34-218ENST00000490552 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
USP34-218ENST00000490552 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
USP34-218ENST00000490552 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
USP34-218ENST00000490552 PTPRMP28827 1452 aa13.12□□□□□ -0.31
USP34-218ENST00000490552 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
USP34-218ENST00000490552 TESK2Q96S53 571 aa13.12□□□□□ -0.31
USP34-218ENST00000490552 ALKQ9UM73 1620 aa13.11□□□□□ -0.31
USP34-218ENST00000490552 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
USP34-218ENST00000490552 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
USP34-218ENST00000490552 ZNF142P52746 1687 aaPredicted RBP13.1□□□□□ -0.31
USP34-218ENST00000490552 C11orf95C9JLR9 678 aaPredicted RBP13.09□□□□□ -0.31
USP34-218ENST00000490552 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
USP34-218ENST00000490552 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
USP34-218ENST00000490552 TMEM132EQ6IEE7 984 aa13.07□□□□□ -0.32
USP34-218ENST00000490552 YTHDC2Q9H6S0 1430 aaKnown RBP13.07□□□□□ -0.32
USP34-218ENST00000490552 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
USP34-218ENST00000490552 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
USP34-218ENST00000490552 BCANQ96GW7 911 aa13.06□□□□□ -0.32
USP34-218ENST00000490552 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
USP34-218ENST00000490552 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
USP34-218ENST00000490552 LTKP29376 864 aa13.05□□□□□ -0.32
USP34-218ENST00000490552 SIRT1Q96EB6 747 aa13.05□□□□□ -0.32
USP34-218ENST00000490552 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
USP34-218ENST00000490552 ASXL1Q8IXJ9 1541 aa13.05□□□□□ -0.32
USP34-218ENST00000490552 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
USP34-218ENST00000490552 NRXN3Q9Y4C0 1643 aa13.05□□□□□ -0.32
USP34-218ENST00000490552 ANP32CO43423 234 aa13.04□□□□□ -0.32
USP34-218ENST00000490552 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
USP34-218ENST00000490552 SETD1AO15047 1707 aaKnown RBP13.04□□□□□ -0.32
USP34-218ENST00000490552 TBX22Q9Y458 520 aa13.04□□□□□ -0.32
USP34-218ENST00000490552 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
USP34-218ENST00000490552 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
USP34-218ENST00000490552 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
USP34-218ENST00000490552 MED14O60244 1454 aa13.03□□□□□ -0.32
USP34-218ENST00000490552 MIER1Q8N108 512 aa13.02□□□□□ -0.32
USP34-218ENST00000490552 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.32
USP34-218ENST00000490552 TECPR2O15040 1411 aa13.02□□□□□ -0.32
USP34-218ENST00000490552 POGKQ9P215 609 aa13.02□□□□□ -0.33
USP34-218ENST00000490552 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
USP34-218ENST00000490552 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
USP34-218ENST00000490552 STK26Q9P289 416 aa13.01□□□□□ -0.33
USP34-218ENST00000490552 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
USP34-218ENST00000490552 QRICH2Q9H0J4 1663 aa13.01□□□□□ -0.33
USP34-218ENST00000490552 METP08581 1390 aa13□□□□□ -0.33
USP34-218ENST00000490552 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
USP34-218ENST00000490552 PRAM1Q96QH2 718 aa12.99□□□□□ -0.33
USP34-218ENST00000490552 CPS1P31327 1500 aa12.98□□□□□ -0.33
USP34-218ENST00000490552 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
USP34-218ENST00000490552 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
USP34-218ENST00000490552 CCER2I3L3R5 266 aa12.97□□□□□ -0.33
USP34-218ENST00000490552 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.34
USP34-218ENST00000490552 SLC26A8Q96RN1 970 aa12.95□□□□□ -0.34
USP34-218ENST00000490552 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
USP34-218ENST00000490552 ATAD2Q6PL18 1390 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms