RNA–Protein interactions for RNA: ENST00000490127.5

RBM3-209, Transcript of RNA binding motif protein 3, humanhuman

TSL 5

Gene RBM3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-209ENST00000490127 ADGRB3O60242 1522 aa17.28■□□□□ 0.36
RBM3-209ENST00000490127 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.36
RBM3-209ENST00000490127 RRBP1Q9P2E9 1410 aaKnown RBP17.27■□□□□ 0.35
RBM3-209ENST00000490127 ANKRD50Q9ULJ7 1429 aa17.27■□□□□ 0.35
RBM3-209ENST00000490127 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
RBM3-209ENST00000490127 MSH6P52701 1360 aa17.26■□□□□ 0.35
RBM3-209ENST00000490127 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
RBM3-209ENST00000490127 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
RBM3-209ENST00000490127 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
RBM3-209ENST00000490127 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
RBM3-209ENST00000490127 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
RBM3-209ENST00000490127 UNC13BO14795 1591 aa17.23■□□□□ 0.35
RBM3-209ENST00000490127 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
RBM3-209ENST00000490127 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
RBM3-209ENST00000490127 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
RBM3-209ENST00000490127 NWD1Q149M9 1564 aa17.21■□□□□ 0.35
RBM3-209ENST00000490127 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
RBM3-209ENST00000490127 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
RBM3-209ENST00000490127 ZFYVE9O95405 1425 aa17.21■□□□□ 0.34
RBM3-209ENST00000490127 ITGAEP38570 1179 aa17.2■□□□□ 0.34
RBM3-209ENST00000490127 C14orf37Q86TY3 774 aa17.19■□□□□ 0.34
RBM3-209ENST00000490127 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
RBM3-209ENST00000490127 NUTM2DQ5VT03 806 aaPredicted RBP17.17■□□□□ 0.34
RBM3-209ENST00000490127 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
RBM3-209ENST00000490127 JCADQ9P266 1359 aa17.16■□□□□ 0.34
RBM3-209ENST00000490127 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
RBM3-209ENST00000490127 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
RBM3-209ENST00000490127 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
RBM3-209ENST00000490127 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
RBM3-209ENST00000490127 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
RBM3-209ENST00000490127 ATF3P18847 181 aa17.13■□□□□ 0.33
RBM3-209ENST00000490127 CADPS2Q86UW7 1296 aa17.13■□□□□ 0.33
RBM3-209ENST00000490127 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
RBM3-209ENST00000490127 NUP155O75694 1391 aa17.11■□□□□ 0.33
RBM3-209ENST00000490127 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
RBM3-209ENST00000490127 ADAMTS13Q76LX8 1427 aa17.11■□□□□ 0.33
RBM3-209ENST00000490127 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
RBM3-209ENST00000490127 E9PCH4 1651 aa17.1■□□□□ 0.33
RBM3-209ENST00000490127 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
RBM3-209ENST00000490127 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
RBM3-209ENST00000490127 NAIPQ13075 1403 aa17.08■□□□□ 0.32
RBM3-209ENST00000490127 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
RBM3-209ENST00000490127 HFM1A2PYH4 1435 aa17.06■□□□□ 0.32
RBM3-209ENST00000490127 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
RBM3-209ENST00000490127 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
RBM3-209ENST00000490127 COL16A1Q07092 1604 aaPredicted RBP17.05■□□□□ 0.32
RBM3-209ENST00000490127 TRPM2O94759 1503 aa17.05■□□□□ 0.32
RBM3-209ENST00000490127 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
RBM3-209ENST00000490127 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
RBM3-209ENST00000490127 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
RBM3-209ENST00000490127 AHDC1Q5TGY3 1603 aaPredicted RBP17.01■□□□□ 0.31
RBM3-209ENST00000490127 LRP6O75581 1613 aa17■□□□□ 0.31
RBM3-209ENST00000490127 NUTM2BA6NNL0 878 aaPredicted RBP17■□□□□ 0.31
RBM3-209ENST00000490127 NUTM2EB1AL46 878 aaPredicted RBP17■□□□□ 0.31
RBM3-209ENST00000490127 NUTM2AQ8IVF1 878 aaPredicted RBP17■□□□□ 0.31
RBM3-209ENST00000490127 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
RBM3-209ENST00000490127 DCCP43146 1447 aa16.98■□□□□ 0.31
RBM3-209ENST00000490127 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
RBM3-209ENST00000490127 SPHKAPQ2M3C7 1700 aa16.97■□□□□ 0.31
RBM3-209ENST00000490127 RXRBP28702 533 aa16.97■□□□□ 0.31
RBM3-209ENST00000490127 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
RBM3-209ENST00000490127 LRRC59Q96AG4 307 aaKnown RBP16.96■□□□□ 0.31
RBM3-209ENST00000490127 SETBP1Q9Y6X0 1596 aa16.95■□□□□ 0.3
RBM3-209ENST00000490127 METP08581 1390 aa16.95■□□□□ 0.3
RBM3-209ENST00000490127 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
RBM3-209ENST00000490127 MST1RQ04912 1400 aa16.94■□□□□ 0.3
RBM3-209ENST00000490127 NRXN3Q9Y4C0 1643 aa16.93■□□□□ 0.3
RBM3-209ENST00000490127 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
RBM3-209ENST00000490127 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
RBM3-209ENST00000490127 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
RBM3-209ENST00000490127 AFF2P51816 1311 aa16.92■□□□□ 0.3
RBM3-209ENST00000490127 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
RBM3-209ENST00000490127 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
RBM3-209ENST00000490127 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
RBM3-209ENST00000490127 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
RBM3-209ENST00000490127 C8orf37Q96NL8 207 aa16.89■□□□□ 0.29
RBM3-209ENST00000490127 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
RBM3-209ENST00000490127 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
RBM3-209ENST00000490127 NHSL1Q5SYE7 1610 aa16.87■□□□□ 0.29
RBM3-209ENST00000490127 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
RBM3-209ENST00000490127 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
RBM3-209ENST00000490127 KIF1BO60333 1816 aa16.85■□□□□ 0.29
RBM3-209ENST00000490127 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
RBM3-209ENST00000490127 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
RBM3-209ENST00000490127 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
RBM3-209ENST00000490127 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
RBM3-209ENST00000490127 C1orf167Q5SNV9 1468 aa16.84■□□□□ 0.29
RBM3-209ENST00000490127 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
RBM3-209ENST00000490127 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
RBM3-209ENST00000490127 NALCNQ8IZF0 1738 aa16.82■□□□□ 0.28
RBM3-209ENST00000490127 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
RBM3-209ENST00000490127 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
RBM3-209ENST00000490127 SOS2Q07890 1332 aaPredicted RBP16.8■□□□□ 0.28
RBM3-209ENST00000490127 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
RBM3-209ENST00000490127 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
RBM3-209ENST00000490127 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.28
RBM3-209ENST00000490127 USP21Q9UK80 565 aa16.77■□□□□ 0.28
RBM3-209ENST00000490127 RGS12O14924 1447 aa16.77■□□□□ 0.27
RBM3-209ENST00000490127 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
RBM3-209ENST00000490127 FOXD1Q16676 465 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms