RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 TMEM131LA2VDJ0 1609 aa12.76□□□□□ -0.37
SMG5-205ENST00000489907 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
SMG5-205ENST00000489907 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
SMG5-205ENST00000489907 ANKRD50Q9ULJ7 1429 aa12.74□□□□□ -0.37
SMG5-205ENST00000489907 APLP2Q06481 763 aa12.74□□□□□ -0.37
SMG5-205ENST00000489907 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
SMG5-205ENST00000489907 PROSER2Q86WR7 435 aaPredicted RBP12.73□□□□□ -0.37
SMG5-205ENST00000489907 UNC13BO14795 1591 aa12.73□□□□□ -0.37
SMG5-205ENST00000489907 E9PCH4 1651 aa12.72□□□□□ -0.37
SMG5-205ENST00000489907 PLEKHG1Q9ULL1 1385 aa12.71□□□□□ -0.37
SMG5-205ENST00000489907 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
SMG5-205ENST00000489907 SLAIN2Q9P270 581 aa12.69□□□□□ -0.38
SMG5-205ENST00000489907 TBX22Q9Y458 520 aa12.69□□□□□ -0.38
SMG5-205ENST00000489907 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
SMG5-205ENST00000489907 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
SMG5-205ENST00000489907 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
SMG5-205ENST00000489907 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
SMG5-205ENST00000489907 IQGAP3Q86VI3 1631 aa12.67□□□□□ -0.38
SMG5-205ENST00000489907 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
SMG5-205ENST00000489907 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.66□□□□□ -0.38
SMG5-205ENST00000489907 NCOA3Q9Y6Q9 1424 aa12.66□□□□□ -0.38
SMG5-205ENST00000489907 MSH6P52701 1360 aa12.66□□□□□ -0.38
SMG5-205ENST00000489907 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
SMG5-205ENST00000489907 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
SMG5-205ENST00000489907 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
SMG5-205ENST00000489907 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
SMG5-205ENST00000489907 PIK3R4Q99570 1358 aa12.63□□□□□ -0.39
SMG5-205ENST00000489907 DIP2AQ14689 1571 aa12.63□□□□□ -0.39
SMG5-205ENST00000489907 JCADQ9P266 1359 aa12.62□□□□□ -0.39
SMG5-205ENST00000489907 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
SMG5-205ENST00000489907 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMG5-205ENST00000489907 BCANQ96GW7 911 aa12.62□□□□□ -0.39
SMG5-205ENST00000489907 LRP6O75581 1613 aa12.61□□□□□ -0.39
SMG5-205ENST00000489907 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
SMG5-205ENST00000489907 SETD1AO15047 1707 aaKnown RBP12.6□□□□□ -0.39
SMG5-205ENST00000489907 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
SMG5-205ENST00000489907 SHPRHQ149N8 1683 aa12.6□□□□□ -0.39
SMG5-205ENST00000489907 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
SMG5-205ENST00000489907 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
SMG5-205ENST00000489907 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
SMG5-205ENST00000489907 NUP155O75694 1391 aa12.58□□□□□ -0.4
SMG5-205ENST00000489907 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
SMG5-205ENST00000489907 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
SMG5-205ENST00000489907 SETBP1Q9Y6X0 1596 aa12.58□□□□□ -0.4
SMG5-205ENST00000489907 TRPM2O94759 1503 aa12.57□□□□□ -0.4
SMG5-205ENST00000489907 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
SMG5-205ENST00000489907 BRINP3Q76B58 766 aa12.56□□□□□ -0.4
SMG5-205ENST00000489907 SPATA31A6Q5VVP1 1343 aa12.56□□□□□ -0.4
SMG5-205ENST00000489907 METP08581 1390 aa12.55□□□□□ -0.4
SMG5-205ENST00000489907 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
SMG5-205ENST00000489907 DCCP43146 1447 aa12.54□□□□□ -0.4
SMG5-205ENST00000489907 MST1RQ04912 1400 aa12.54□□□□□ -0.4
SMG5-205ENST00000489907 CLTCL1P53675 1640 aa12.53□□□□□ -0.4
SMG5-205ENST00000489907 ATF3P18847 181 aa12.53□□□□□ -0.4
SMG5-205ENST00000489907 NEXMIFQ5QGS0 1516 aa12.52□□□□□ -0.4
SMG5-205ENST00000489907 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.41
SMG5-205ENST00000489907 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
SMG5-205ENST00000489907 ITGAEP38570 1179 aa12.51□□□□□ -0.41
SMG5-205ENST00000489907 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
SMG5-205ENST00000489907 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
SMG5-205ENST00000489907 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
SMG5-205ENST00000489907 KIF1BO60333 1816 aa12.49□□□□□ -0.41
SMG5-205ENST00000489907 LAMC1P11047 1609 aa12.49□□□□□ -0.41
SMG5-205ENST00000489907 ZNF772Q68DY9 489 aaPredicted RBP12.49□□□□□ -0.41
SMG5-205ENST00000489907 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMG5-205ENST00000489907 NAIPQ13075 1403 aa12.48□□□□□ -0.41
SMG5-205ENST00000489907 ADGRL3Q9HAR2 1447 aa12.47□□□□□ -0.41
SMG5-205ENST00000489907 RRBP1Q9P2E9 1410 aaKnown RBP12.47□□□□□ -0.41
SMG5-205ENST00000489907 DDX17Q92841 729 aaKnown RBP12.47□□□□□ -0.41
SMG5-205ENST00000489907 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.42
SMG5-205ENST00000489907 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
SMG5-205ENST00000489907 LRRC59Q96AG4 307 aaKnown RBP12.45□□□□□ -0.42
SMG5-205ENST00000489907 PRAG1Q86YV5 1406 aa12.45□□□□□ -0.42
SMG5-205ENST00000489907 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
SMG5-205ENST00000489907 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
SMG5-205ENST00000489907 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
SMG5-205ENST00000489907 RXRBP28702 533 aa12.44□□□□□ -0.42
SMG5-205ENST00000489907 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
SMG5-205ENST00000489907 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
SMG5-205ENST00000489907 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
SMG5-205ENST00000489907 AFF2P51816 1311 aa12.43□□□□□ -0.42
SMG5-205ENST00000489907 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
SMG5-205ENST00000489907 PPLO60437 1756 aa12.43□□□□□ -0.42
SMG5-205ENST00000489907 ROBO2Q9HCK4 1378 aa12.43□□□□□ -0.42
SMG5-205ENST00000489907 PTCH1Q13635 1447 aa12.42□□□□□ -0.42
SMG5-205ENST00000489907 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
SMG5-205ENST00000489907 ORAI2Q96SN7 254 aa12.4□□□□□ -0.42
SMG5-205ENST00000489907 RGS12O14924 1447 aa12.39□□□□□ -0.43
SMG5-205ENST00000489907 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
SMG5-205ENST00000489907 RPGRIP1LQ68CZ1 1315 aa12.38□□□□□ -0.43
SMG5-205ENST00000489907 HFM1A2PYH4 1435 aa12.38□□□□□ -0.43
SMG5-205ENST00000489907 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
SMG5-205ENST00000489907 QTRT2Q9H974 415 aaKnown RBP12.38□□□□□ -0.43
SMG5-205ENST00000489907 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
SMG5-205ENST00000489907 C8orf37Q96NL8 207 aa12.37□□□□□ -0.43
SMG5-205ENST00000489907 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
SMG5-205ENST00000489907 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
SMG5-205ENST00000489907 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
SMG5-205ENST00000489907 ADAMTS2O95450 1211 aa12.34□□□□□ -0.43
SMG5-205ENST00000489907 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms