RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
TOP3B-217ENST00000489581 ANKRD50Q9ULJ7 1429 aa26.35■■□□□ 1.81
TOP3B-217ENST00000489581 RPRD2Q5VT52 1461 aaKnown RBP26.32■■□□□ 1.8
TOP3B-217ENST00000489581 NWD1Q149M9 1564 aa26.32■■□□□ 1.8
TOP3B-217ENST00000489581 NKTRP30414 1462 aaKnown RBP26.31■■□□□ 1.8
TOP3B-217ENST00000489581 GCC2Q8IWJ2 1684 aa26.3■■□□□ 1.8
TOP3B-217ENST00000489581 PPP1R15AO75807 674 aaPredicted RBP26.29■■□□□ 1.8
TOP3B-217ENST00000489581 CHD2O14647 1828 aaKnown RBP26.29■■□□□ 1.8
TOP3B-217ENST00000489581 MSH6P52701 1360 aa26.29■■□□□ 1.8
TOP3B-217ENST00000489581 ZFYVE9O95405 1425 aa26.29■■□□□ 1.8
TOP3B-217ENST00000489581 PLEKHG1Q9ULL1 1385 aa26.27■■□□□ 1.8
TOP3B-217ENST00000489581 RIMS2Q9UQ26 1411 aa26.27■■□□□ 1.8
TOP3B-217ENST00000489581 CHGAP10645 457 aaKnown RBP26.26■■□□□ 1.79
TOP3B-217ENST00000489581 HDGFP51858 240 aaKnown RBP26.26■■□□□ 1.79
TOP3B-217ENST00000489581 POTEAQ6S8J7 498 aa26.26■■□□□ 1.79
TOP3B-217ENST00000489581 SLAIN2Q9P270 581 aa26.26■■□□□ 1.79
TOP3B-217ENST00000489581 TMEM131LA2VDJ0 1609 aa26.25■■□□□ 1.79
TOP3B-217ENST00000489581 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
TOP3B-217ENST00000489581 NUTM2DQ5VT03 806 aaPredicted RBP26.21■■□□□ 1.79
TOP3B-217ENST00000489581 TBX22Q9Y458 520 aa26.2■■□□□ 1.78
TOP3B-217ENST00000489581 UNC13BO14795 1591 aa26.2■■□□□ 1.78
TOP3B-217ENST00000489581 E9PCH4 1651 aa26.19■■□□□ 1.78
TOP3B-217ENST00000489581 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.18■■□□□ 1.78
TOP3B-217ENST00000489581 C14orf37Q86TY3 774 aa26.16■■□□□ 1.78
TOP3B-217ENST00000489581 JCADQ9P266 1359 aa26.14■■□□□ 1.78
TOP3B-217ENST00000489581 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
TOP3B-217ENST00000489581 IQGAP3Q86VI3 1631 aa26.11■■□□□ 1.77
TOP3B-217ENST00000489581 NCOA3Q9Y6Q9 1424 aa26.11■■□□□ 1.77
TOP3B-217ENST00000489581 ROCK1Q13464 1354 aa26.1■■□□□ 1.77
TOP3B-217ENST00000489581 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.1■■□□□ 1.77
TOP3B-217ENST00000489581 COL16A1Q07092 1604 aaPredicted RBP26.1■■□□□ 1.77
TOP3B-217ENST00000489581 ITGAEP38570 1179 aa26.09■■□□□ 1.77
TOP3B-217ENST00000489581 NUP155O75694 1391 aa26.08■■□□□ 1.77
TOP3B-217ENST00000489581 DIP2AQ14689 1571 aa26.07■■□□□ 1.76
TOP3B-217ENST00000489581 C19orf44Q9H6X5 657 aa26.07■■□□□ 1.76
TOP3B-217ENST00000489581 ATF3P18847 181 aa26.06■■□□□ 1.76
TOP3B-217ENST00000489581 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
TOP3B-217ENST00000489581 PIK3R4Q99570 1358 aa26.06■■□□□ 1.76
TOP3B-217ENST00000489581 AMOTL2Q9Y2J4 779 aa26.05■■□□□ 1.76
TOP3B-217ENST00000489581 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
TOP3B-217ENST00000489581 TRPM2O94759 1503 aa26.03■■□□□ 1.76
TOP3B-217ENST00000489581 PTPRUQ92729 1446 aa26.02■■□□□ 1.76
TOP3B-217ENST00000489581 LRP6O75581 1613 aa26.01■■□□□ 1.75
TOP3B-217ENST00000489581 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
TOP3B-217ENST00000489581 MEX3CQ5U5Q3 659 aaKnown RBP26■■□□□ 1.75
TOP3B-217ENST00000489581 AHDC1Q5TGY3 1603 aaPredicted RBP25.99■■□□□ 1.75
TOP3B-217ENST00000489581 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
TOP3B-217ENST00000489581 BRINP3Q76B58 766 aa25.96■■□□□ 1.75
TOP3B-217ENST00000489581 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
TOP3B-217ENST00000489581 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
TOP3B-217ENST00000489581 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
TOP3B-217ENST00000489581 NRXN3Q9Y4C0 1643 aa25.95■■□□□ 1.74
TOP3B-217ENST00000489581 ZNF772Q68DY9 489 aaPredicted RBP25.93■■□□□ 1.74
TOP3B-217ENST00000489581 XRN1Q8IZH2 1706 aaKnown RBP25.91■■□□□ 1.74
TOP3B-217ENST00000489581 NUTM2BA6NNL0 878 aaPredicted RBP25.91■■□□□ 1.74
TOP3B-217ENST00000489581 NUTM2EB1AL46 878 aaPredicted RBP25.91■■□□□ 1.74
TOP3B-217ENST00000489581 NUTM2AQ8IVF1 878 aaPredicted RBP25.91■■□□□ 1.74
TOP3B-217ENST00000489581 SETBP1Q9Y6X0 1596 aa25.9■■□□□ 1.74
TOP3B-217ENST00000489581 TRIM52Q96A61 297 aa25.9■■□□□ 1.74
TOP3B-217ENST00000489581 DCCP43146 1447 aa25.89■■□□□ 1.74
TOP3B-217ENST00000489581 METP08581 1390 aa25.89■■□□□ 1.74
TOP3B-217ENST00000489581 ASXL1Q8IXJ9 1541 aa25.86■■□□□ 1.73
TOP3B-217ENST00000489581 MST1RQ04912 1400 aa25.86■■□□□ 1.73
TOP3B-217ENST00000489581 CLTCL1P53675 1640 aa25.84■■□□□ 1.73
TOP3B-217ENST00000489581 NHSL1Q5SYE7 1610 aa25.82■■□□□ 1.72
TOP3B-217ENST00000489581 RXRBP28702 533 aa25.82■■□□□ 1.72
TOP3B-217ENST00000489581 DDX17Q92841 729 aaKnown RBP25.82■■□□□ 1.72
TOP3B-217ENST00000489581 UPF1Q92900 1129 aaKnown RBP eCLIP25.82■■□□□ 1.72
TOP3B-217ENST00000489581 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
TOP3B-217ENST00000489581 NEXMIFQ5QGS0 1516 aa25.81■■□□□ 1.72
TOP3B-217ENST00000489581 KIF1BO60333 1816 aa25.81■■□□□ 1.72
TOP3B-217ENST00000489581 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
TOP3B-217ENST00000489581 AFF2P51816 1311 aa25.8■■□□□ 1.72
TOP3B-217ENST00000489581 ADGRL3Q9HAR2 1447 aa25.79■■□□□ 1.72
TOP3B-217ENST00000489581 NALCNQ8IZF0 1738 aa25.78■■□□□ 1.72
TOP3B-217ENST00000489581 C8orf37Q96NL8 207 aa25.73■■□□□ 1.71
TOP3B-217ENST00000489581 NAIPQ13075 1403 aa25.72■■□□□ 1.71
TOP3B-217ENST00000489581 PNPLA6Q8IY17 1366 aa25.72■■□□□ 1.71
TOP3B-217ENST00000489581 CDK12Q9NYV4 1490 aaPredicted RBP25.7■■□□□ 1.7
TOP3B-217ENST00000489581 C1orf167Q5SNV9 1468 aa25.69■■□□□ 1.7
TOP3B-217ENST00000489581 VGFO15240 615 aaPredicted RBP25.69■■□□□ 1.7
TOP3B-217ENST00000489581 QTRT2Q9H974 415 aaKnown RBP25.69■■□□□ 1.7
TOP3B-217ENST00000489581 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
TOP3B-217ENST00000489581 ROBO2Q9HCK4 1378 aa25.67■■□□□ 1.7
TOP3B-217ENST00000489581 ADAMTS2O95450 1211 aa25.66■■□□□ 1.7
TOP3B-217ENST00000489581 ORAI2Q96SN7 254 aa25.66■■□□□ 1.7
TOP3B-217ENST00000489581 PTCH1Q13635 1447 aa25.65■■□□□ 1.7
TOP3B-217ENST00000489581 RBM6P78332 1123 aaKnown RBP25.64■■□□□ 1.7
TOP3B-217ENST00000489581 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
TOP3B-217ENST00000489581 SLC4A1APQ9BWU0 796 aaKnown RBP25.62■■□□□ 1.69
TOP3B-217ENST00000489581 RGS12O14924 1447 aa25.62■■□□□ 1.69
TOP3B-217ENST00000489581 LAMC1P11047 1609 aa25.61■■□□□ 1.69
TOP3B-217ENST00000489581 SOS2Q07890 1332 aaPredicted RBP25.61■■□□□ 1.69
TOP3B-217ENST00000489581 RPGRIP1LQ68CZ1 1315 aa25.61■■□□□ 1.69
TOP3B-217ENST00000489581 PPLO60437 1756 aa25.6■■□□□ 1.69
TOP3B-217ENST00000489581 HFM1A2PYH4 1435 aa25.57■■□□□ 1.68
TOP3B-217ENST00000489581 PRAG1Q86YV5 1406 aa25.54■■□□□ 1.68
TOP3B-217ENST00000489581 FOXD1Q16676 465 aa25.54■■□□□ 1.68
TOP3B-217ENST00000489581 USP21Q9UK80 565 aa25.54■■□□□ 1.68
TOP3B-217ENST00000489581 ESCO1Q5FWF5 840 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms