RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.32□□□□□ -1.4
CALD1-221ENST00000489019 HDGFP51858 240 aaKnown RBP6.32□□□□□ -1.4
CALD1-221ENST00000489019 PPP4CP60510 307 aa6.32□□□□□ -1.4
CALD1-221ENST00000489019 MINK1Q8N4C8 1332 aaPredicted RBP6.31□□□□□ -1.4
CALD1-221ENST00000489019 BARGINQ6ZT62 677 aa6.31□□□□□ -1.4
CALD1-221ENST00000489019 SLF2Q8IX21 1173 aa6.31□□□□□ -1.4
CALD1-221ENST00000489019 CCDC102AQ96A19 550 aa6.31□□□□□ -1.4
CALD1-221ENST00000489019 APLP1P51693 650 aa6.3□□□□□ -1.4
CALD1-221ENST00000489019 NYAP1Q6ZVC0 841 aa6.3□□□□□ -1.4
CALD1-221ENST00000489019 PLA2G2EQ9NZK7 142 aa6.3□□□□□ -1.4
CALD1-221ENST00000489019 SLC10A3P09131 477 aa6.29□□□□□ -1.4
CALD1-221ENST00000489019 KRI1Q8N9T8 703 aaKnown RBP6.27□□□□□ -1.41
CALD1-221ENST00000489019 DAXXQ9UER7 740 aaPredicted RBP6.27□□□□□ -1.41
CALD1-221ENST00000489019 ITGBL1O95965 494 aaPredicted RBP6.26□□□□□ -1.41
CALD1-221ENST00000489019 DDX11L8A8MPP1 907 aa6.25□□□□□ -1.41
CALD1-221ENST00000489019 CFHP08603 1231 aa6.25□□□□□ -1.41
CALD1-221ENST00000489019 SLC4A3P48751 1232 aa6.25□□□□□ -1.41
CALD1-221ENST00000489019 MDM2Q00987 491 aaPredicted RBP6.25□□□□□ -1.41
CALD1-221ENST00000489019 TJAP1Q5JTD0 557 aa6.25□□□□□ -1.41
CALD1-221ENST00000489019 NECTIN2Q92692 538 aa6.25□□□□□ -1.41
CALD1-221ENST00000489019 REPIN1Q9BWE0 567 aaKnown RBP6.25□□□□□ -1.41
CALD1-221ENST00000489019 MTRQ99707 1265 aa6.24□□□□□ -1.41
CALD1-221ENST00000489019 TMUB1Q9BVT8 246 aa6.24□□□□□ -1.41
CALD1-221ENST00000489019 IFFO2Q5TF58 517 aa6.23□□□□□ -1.41
CALD1-221ENST00000489019 RDH13Q8NBN7 331 aa6.23□□□□□ -1.41
CALD1-221ENST00000489019 ZNF516Q92618 1163 aa6.23□□□□□ -1.41
CALD1-221ENST00000489019 SLC24A3Q9HC58 644 aa6.23□□□□□ -1.41
CALD1-221ENST00000489019 ACTN4O43707 911 aaKnown RBP6.22□□□□□ -1.41
CALD1-221ENST00000489019 COPS2P61201 443 aa6.22□□□□□ -1.41
CALD1-221ENST00000489019 KCNC4Q03721 635 aa6.22□□□□□ -1.41
CALD1-221ENST00000489019 GPCPD1Q9NPB8 672 aa6.22□□□□□ -1.41
CALD1-221ENST00000489019 TRIM66O15016 1216 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 CD46P15529 392 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 AMHR2Q16671 573 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 BLOC1S3Q6QNY0 202 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 SULF1Q8IWU6 871 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 PRR14Q9BWN1 585 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 PCDHB3Q9Y5E6 796 aa6.21□□□□□ -1.42
CALD1-221ENST00000489019 CLCN1P35523 988 aa6.2□□□□□ -1.42
CALD1-221ENST00000489019 GCGRP47871 477 aa6.2□□□□□ -1.42
CALD1-221ENST00000489019 KMT5BQ4FZB7 885 aa6.2□□□□□ -1.42
CALD1-221ENST00000489019 AK7Q96M32 723 aa6.2□□□□□ -1.42
CALD1-221ENST00000489019 IL21Q9HBE4 155 aa6.2□□□□□ -1.42
CALD1-221ENST00000489019 FAM217BQ9NTX9 383 aaPredicted RBP6.2□□□□□ -1.42
CALD1-221ENST00000489019 FUT2Q10981 343 aa6.19□□□□□ -1.42
CALD1-221ENST00000489019 PUS10Q3MIT2 529 aaKnown RBP6.19□□□□□ -1.42
CALD1-221ENST00000489019 RSPH4AQ5TD94 716 aa6.19□□□□□ -1.42
CALD1-221ENST00000489019 NKX2-3Q8TAU0 364 aa6.19□□□□□ -1.42
CALD1-221ENST00000489019 A0A0G2JS52 829 aa6.18□□□□□ -1.42
CALD1-221ENST00000489019 ZPR1O75312 459 aa6.18□□□□□ -1.42
CALD1-221ENST00000489019 TTLL12Q14166 644 aaPredicted RBP6.18□□□□□ -1.42
CALD1-221ENST00000489019 GIGYF2Q6Y7W6 1299 aaKnown RBP6.18□□□□□ -1.42
CALD1-221ENST00000489019 PARP9Q8IXQ6 854 aa6.18□□□□□ -1.42
CALD1-221ENST00000489019 TLL1O43897 1013 aa6.17□□□□□ -1.42
CALD1-221ENST00000489019 SSTR3P32745 418 aaPredicted RBP6.16□□□□□ -1.42
CALD1-221ENST00000489019 PDE4DQ08499 809 aa6.16□□□□□ -1.42
CALD1-221ENST00000489019 MORN1Q5T089 497 aa6.16□□□□□ -1.42
CALD1-221ENST00000489019 SCUBE3Q8IX30 993 aa6.16□□□□□ -1.42
CALD1-221ENST00000489019 MS4A1P11836 297 aa6.15□□□□□ -1.42
CALD1-221ENST00000489019 ATP6V1AP38606 617 aa6.15□□□□□ -1.42
CALD1-221ENST00000489019 HLA-CQ95604 372 aa6.15□□□□□ -1.42
CALD1-221ENST00000489019 KDM4AO75164 1064 aa6.14□□□□□ -1.43
CALD1-221ENST00000489019 PPP1R18Q6NYC8 613 aa6.14□□□□□ -1.43
CALD1-221ENST00000489019 SLC27A5Q9Y2P5 690 aa6.14□□□□□ -1.43
CALD1-221ENST00000489019 NR1I2O75469 434 aa6.13□□□□□ -1.43
CALD1-221ENST00000489019 HOXA2O43364 376 aa6.12□□□□□ -1.43
CALD1-221ENST00000489019 THAP11Q96EK4 314 aa6.12□□□□□ -1.43
CALD1-221ENST00000489019 GUCA2AQ02747 115 aa6.11□□□□□ -1.43
CALD1-221ENST00000489019 TPRNQ4KMQ1 711 aa6.11□□□□□ -1.43
CALD1-221ENST00000489019 RNF19BQ6ZMZ0 732 aa6.11□□□□□ -1.43
CALD1-221ENST00000489019 SPIRE2Q8WWL2 714 aa6.11□□□□□ -1.43
CALD1-221ENST00000489019 BEGAINQ9BUH8 593 aa6.11□□□□□ -1.43
CALD1-221ENST00000489019 ADH1BP00325 375 aa6.1□□□□□ -1.43
CALD1-221ENST00000489019 USP46P62068 366 aa6.1□□□□□ -1.43
CALD1-221ENST00000489019 SPSB2Q99619 263 aa6.1□□□□□ -1.43
CALD1-221ENST00000489019 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.1□□□□□ -1.43
CALD1-221ENST00000489019 S1PR4O95977 384 aa6.09□□□□□ -1.43
CALD1-221ENST00000489019 GRIPAP1Q4V328 841 aa6.09□□□□□ -1.43
CALD1-221ENST00000489019 BRICD5Q6PL45 260 aa6.09□□□□□ -1.43
CALD1-221ENST00000489019 NUTM1Q86Y26 1132 aa6.09□□□□□ -1.43
CALD1-221ENST00000489019 FAM160A2Q8N612 972 aaPredicted RBP6.09□□□□□ -1.43
CALD1-221ENST00000489019 GPBP1L1Q9HC44 474 aaPredicted RBP6.09□□□□□ -1.43
CALD1-221ENST00000489019 SALL2Q9Y467 1007 aaPredicted RBP6.09□□□□□ -1.43
CALD1-221ENST00000489019 MOXD2PA6NHM9 499 aa6.08□□□□□ -1.44
CALD1-221ENST00000489019 RNF223E7ERA6 249 aa6.08□□□□□ -1.44
CALD1-221ENST00000489019 PPEF1O14829 653 aaPredicted RBP6.08□□□□□ -1.44
CALD1-221ENST00000489019 FMNL1O95466 1100 aaPredicted RBP6.08□□□□□ -1.44
CALD1-221ENST00000489019 NDUFV2P19404 249 aa6.08□□□□□ -1.44
CALD1-221ENST00000489019 PCDHGC3Q9UN70 934 aa6.08□□□□□ -1.44
CALD1-221ENST00000489019 RGS20O76081 388 aa6.07□□□□□ -1.44
CALD1-221ENST00000489019 SYMPKQ92797 1274 aaKnown RBP6.07□□□□□ -1.44
CALD1-221ENST00000489019 TBC1D2Q9BYX2 928 aa6.07□□□□□ -1.44
CALD1-221ENST00000489019 SLC6A16Q9GZN6 736 aa6.07□□□□□ -1.44
CALD1-221ENST00000489019 PRDM9Q9NQV7 894 aa6.07□□□□□ -1.44
CALD1-221ENST00000489019 EMID1Q96A84 441 aaPredicted RBP6.06□□□□□ -1.44
CALD1-221ENST00000489019 KDM4CQ9H3R0 1056 aa6.06□□□□□ -1.44
CALD1-221ENST00000489019 FDX1P10109 184 aa6.05□□□□□ -1.44
CALD1-221ENST00000489019 PRKCSHP14314 528 aaPredicted RBP6.05□□□□□ -1.44
CALD1-221ENST00000489019 GGCXP38435 758 aa6.05□□□□□ -1.44
CALD1-221ENST00000489019 Q3C1V9 767 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms