RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
YIPF3-207ENST00000488966 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
YIPF3-207ENST00000488966 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
YIPF3-207ENST00000488966 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.28
YIPF3-207ENST00000488966 ZFYVE9O95405 1425 aa16.77■□□□□ 0.27
YIPF3-207ENST00000488966 MSH6P52701 1360 aa16.77■□□□□ 0.27
YIPF3-207ENST00000488966 RPRD2Q5VT52 1461 aaKnown RBP16.76■□□□□ 0.27
YIPF3-207ENST00000488966 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
YIPF3-207ENST00000488966 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
YIPF3-207ENST00000488966 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
YIPF3-207ENST00000488966 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
YIPF3-207ENST00000488966 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
YIPF3-207ENST00000488966 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
YIPF3-207ENST00000488966 TBX22Q9Y458 520 aa16.71■□□□□ 0.27
YIPF3-207ENST00000488966 JCADQ9P266 1359 aa16.7■□□□□ 0.26
YIPF3-207ENST00000488966 NUTM2DQ5VT03 806 aaPredicted RBP16.7■□□□□ 0.26
YIPF3-207ENST00000488966 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
YIPF3-207ENST00000488966 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.68■□□□□ 0.26
YIPF3-207ENST00000488966 ADAMTS13Q76LX8 1427 aa16.68■□□□□ 0.26
YIPF3-207ENST00000488966 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
YIPF3-207ENST00000488966 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
YIPF3-207ENST00000488966 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
YIPF3-207ENST00000488966 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
YIPF3-207ENST00000488966 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
YIPF3-207ENST00000488966 UNC13BO14795 1591 aa16.64■□□□□ 0.25
YIPF3-207ENST00000488966 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
YIPF3-207ENST00000488966 C19orf44Q9H6X5 657 aa16.64■□□□□ 0.25
YIPF3-207ENST00000488966 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
YIPF3-207ENST00000488966 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
YIPF3-207ENST00000488966 ATF3P18847 181 aa16.62■□□□□ 0.25
YIPF3-207ENST00000488966 LRP6O75581 1613 aa16.62■□□□□ 0.25
YIPF3-207ENST00000488966 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
YIPF3-207ENST00000488966 PIK3R4Q99570 1358 aa16.62■□□□□ 0.25
YIPF3-207ENST00000488966 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
YIPF3-207ENST00000488966 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
YIPF3-207ENST00000488966 E9PCH4 1651 aa16.6■□□□□ 0.25
YIPF3-207ENST00000488966 NUP155O75694 1391 aa16.6■□□□□ 0.25
YIPF3-207ENST00000488966 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
YIPF3-207ENST00000488966 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
YIPF3-207ENST00000488966 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
YIPF3-207ENST00000488966 BRINP3Q76B58 766 aa16.58■□□□□ 0.24
YIPF3-207ENST00000488966 SETD1AO15047 1707 aaKnown RBP16.57■□□□□ 0.24
YIPF3-207ENST00000488966 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
YIPF3-207ENST00000488966 IQGAP3Q86VI3 1631 aa16.57■□□□□ 0.24
YIPF3-207ENST00000488966 ITGAEP38570 1179 aa16.57■□□□□ 0.24
YIPF3-207ENST00000488966 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-207ENST00000488966 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-207ENST00000488966 TRPM2O94759 1503 aa16.55■□□□□ 0.24
YIPF3-207ENST00000488966 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
YIPF3-207ENST00000488966 NUTM2BA6NNL0 878 aaPredicted RBP16.53■□□□□ 0.24
YIPF3-207ENST00000488966 NUTM2EB1AL46 878 aaPredicted RBP16.53■□□□□ 0.24
YIPF3-207ENST00000488966 NUTM2AQ8IVF1 878 aaPredicted RBP16.53■□□□□ 0.24
YIPF3-207ENST00000488966 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.24
YIPF3-207ENST00000488966 DCCP43146 1447 aa16.52■□□□□ 0.23
YIPF3-207ENST00000488966 METP08581 1390 aa16.51■□□□□ 0.23
YIPF3-207ENST00000488966 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
YIPF3-207ENST00000488966 ZNF326Q5BKZ1 582 aaKnown RBP16.5■□□□□ 0.23
YIPF3-207ENST00000488966 MST1RQ04912 1400 aa16.5■□□□□ 0.23
YIPF3-207ENST00000488966 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
YIPF3-207ENST00000488966 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
YIPF3-207ENST00000488966 NRXN3Q9Y4C0 1643 aa16.49■□□□□ 0.23
YIPF3-207ENST00000488966 RXRBP28702 533 aa16.49■□□□□ 0.23
YIPF3-207ENST00000488966 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
YIPF3-207ENST00000488966 XRN1Q8IZH2 1706 aaKnown RBP16.48■□□□□ 0.23
YIPF3-207ENST00000488966 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
YIPF3-207ENST00000488966 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
YIPF3-207ENST00000488966 AFF2P51816 1311 aa16.46■□□□□ 0.23
YIPF3-207ENST00000488966 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
YIPF3-207ENST00000488966 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
YIPF3-207ENST00000488966 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-207ENST00000488966 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
YIPF3-207ENST00000488966 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
YIPF3-207ENST00000488966 C8orf37Q96NL8 207 aa16.42■□□□□ 0.22
YIPF3-207ENST00000488966 NHSL1Q5SYE7 1610 aa16.41■□□□□ 0.22
YIPF3-207ENST00000488966 NEXMIFQ5QGS0 1516 aa16.41■□□□□ 0.22
YIPF3-207ENST00000488966 CLTCL1P53675 1640 aa16.4■□□□□ 0.22
YIPF3-207ENST00000488966 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.21
YIPF3-207ENST00000488966 C1orf167Q5SNV9 1468 aa16.39■□□□□ 0.21
YIPF3-207ENST00000488966 ADAMTS2O95450 1211 aa16.38■□□□□ 0.21
YIPF3-207ENST00000488966 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
YIPF3-207ENST00000488966 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
YIPF3-207ENST00000488966 RGS12O14924 1447 aa16.37■□□□□ 0.21
YIPF3-207ENST00000488966 NALCNQ8IZF0 1738 aa16.36■□□□□ 0.21
YIPF3-207ENST00000488966 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
YIPF3-207ENST00000488966 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
YIPF3-207ENST00000488966 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
YIPF3-207ENST00000488966 NAIPQ13075 1403 aa16.36■□□□□ 0.21
YIPF3-207ENST00000488966 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
YIPF3-207ENST00000488966 SOS2Q07890 1332 aaPredicted RBP16.35■□□□□ 0.21
YIPF3-207ENST00000488966 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
YIPF3-207ENST00000488966 PRAG1Q86YV5 1406 aa16.31■□□□□ 0.2
YIPF3-207ENST00000488966 RPGRIP1LQ68CZ1 1315 aa16.31■□□□□ 0.2
YIPF3-207ENST00000488966 USP21Q9UK80 565 aa16.31■□□□□ 0.2
YIPF3-207ENST00000488966 LAMC1P11047 1609 aa16.3■□□□□ 0.2
YIPF3-207ENST00000488966 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
YIPF3-207ENST00000488966 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
YIPF3-207ENST00000488966 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
YIPF3-207ENST00000488966 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
YIPF3-207ENST00000488966 KIF1BO60333 1816 aa16.27■□□□□ 0.2
YIPF3-207ENST00000488966 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms