RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 NOS1P29475 1434 aa16.28■□□□□ 0.2
LRMDA-205ENST00000488759 SLC52A1Q9NWF4 448 aa16.27■□□□□ 0.2
LRMDA-205ENST00000488759 SPHKAPQ2M3C7 1700 aa16.27■□□□□ 0.19
LRMDA-205ENST00000488759 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
LRMDA-205ENST00000488759 TMEM131LA2VDJ0 1609 aa16.26■□□□□ 0.19
LRMDA-205ENST00000488759 NUP155O75694 1391 aa16.26■□□□□ 0.19
LRMDA-205ENST00000488759 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
LRMDA-205ENST00000488759 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
LRMDA-205ENST00000488759 PROSER2Q86WR7 435 aaPredicted RBP16.25■□□□□ 0.19
LRMDA-205ENST00000488759 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
LRMDA-205ENST00000488759 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
LRMDA-205ENST00000488759 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
LRMDA-205ENST00000488759 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
LRMDA-205ENST00000488759 SOCS7O14512 581 aa16.23■□□□□ 0.19
LRMDA-205ENST00000488759 ROBO1Q9Y6N7 1651 aa16.23■□□□□ 0.19
LRMDA-205ENST00000488759 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
LRMDA-205ENST00000488759 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
LRMDA-205ENST00000488759 NWD1Q149M9 1564 aa16.21■□□□□ 0.19
LRMDA-205ENST00000488759 MSH6P52701 1360 aa16.21■□□□□ 0.19
LRMDA-205ENST00000488759 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.19
LRMDA-205ENST00000488759 KIF1BO60333 1816 aa16.2■□□□□ 0.18
LRMDA-205ENST00000488759 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
LRMDA-205ENST00000488759 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
LRMDA-205ENST00000488759 PLEKHG1Q9ULL1 1385 aa16.19■□□□□ 0.18
LRMDA-205ENST00000488759 KCNA6P17658 529 aa16.19■□□□□ 0.18
LRMDA-205ENST00000488759 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.19■□□□□ 0.18
LRMDA-205ENST00000488759 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
LRMDA-205ENST00000488759 ZFYVE9O95405 1425 aa16.17■□□□□ 0.18
LRMDA-205ENST00000488759 TRPM2O94759 1503 aa16.16■□□□□ 0.18
LRMDA-205ENST00000488759 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
LRMDA-205ENST00000488759 CLTCL1P53675 1640 aa16.12■□□□□ 0.17
LRMDA-205ENST00000488759 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.1■□□□□ 0.17
LRMDA-205ENST00000488759 RRBP1Q9P2E9 1410 aaKnown RBP16.1■□□□□ 0.17
LRMDA-205ENST00000488759 ATF3P18847 181 aa16.08■□□□□ 0.16
LRMDA-205ENST00000488759 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
LRMDA-205ENST00000488759 MEX3CQ5U5Q3 659 aaKnown RBP16.06■□□□□ 0.16
LRMDA-205ENST00000488759 NAIPQ13075 1403 aa16.05■□□□□ 0.16
LRMDA-205ENST00000488759 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
LRMDA-205ENST00000488759 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
LRMDA-205ENST00000488759 TBX22Q9Y458 520 aa16.05■□□□□ 0.16
LRMDA-205ENST00000488759 NRXN3Q9Y4C0 1643 aa16.05■□□□□ 0.16
LRMDA-205ENST00000488759 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
LRMDA-205ENST00000488759 SETD1AO15047 1707 aaKnown RBP16.03■□□□□ 0.16
LRMDA-205ENST00000488759 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
LRMDA-205ENST00000488759 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
LRMDA-205ENST00000488759 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
LRMDA-205ENST00000488759 PIK3R4Q99570 1358 aa16.02■□□□□ 0.16
LRMDA-205ENST00000488759 CADPS2Q86UW7 1296 aa16.02■□□□□ 0.16
LRMDA-205ENST00000488759 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.15
LRMDA-205ENST00000488759 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
LRMDA-205ENST00000488759 NALCNQ8IZF0 1738 aa16■□□□□ 0.15
LRMDA-205ENST00000488759 COL16A1Q07092 1604 aaPredicted RBP16■□□□□ 0.15
LRMDA-205ENST00000488759 PPLO60437 1756 aa16■□□□□ 0.15
LRMDA-205ENST00000488759 JCADQ9P266 1359 aa15.99■□□□□ 0.15
LRMDA-205ENST00000488759 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
LRMDA-205ENST00000488759 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
LRMDA-205ENST00000488759 PTPRUQ92729 1446 aa15.97■□□□□ 0.15
LRMDA-205ENST00000488759 SHPRHQ149N8 1683 aa15.96■□□□□ 0.15
LRMDA-205ENST00000488759 AHDC1Q5TGY3 1603 aaPredicted RBP15.95■□□□□ 0.14
LRMDA-205ENST00000488759 NUTM2BA6NNL0 878 aaPredicted RBP15.95■□□□□ 0.14
LRMDA-205ENST00000488759 NUTM2EB1AL46 878 aaPredicted RBP15.95■□□□□ 0.14
LRMDA-205ENST00000488759 NUTM2AQ8IVF1 878 aaPredicted RBP15.95■□□□□ 0.14
LRMDA-205ENST00000488759 METP08581 1390 aa15.95■□□□□ 0.14
LRMDA-205ENST00000488759 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
LRMDA-205ENST00000488759 FOXD1Q16676 465 aa15.94■□□□□ 0.14
LRMDA-205ENST00000488759 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
LRMDA-205ENST00000488759 DCCP43146 1447 aa15.94■□□□□ 0.14
LRMDA-205ENST00000488759 VGFO15240 615 aaPredicted RBP15.92■□□□□ 0.14
LRMDA-205ENST00000488759 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
LRMDA-205ENST00000488759 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
LRMDA-205ENST00000488759 RGL3Q3MIN7 710 aa15.89■□□□□ 0.13
LRMDA-205ENST00000488759 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
LRMDA-205ENST00000488759 SPATA31A6Q5VVP1 1343 aa15.89■□□□□ 0.13
LRMDA-205ENST00000488759 MST1RQ04912 1400 aa15.88■□□□□ 0.13
LRMDA-205ENST00000488759 LRP6O75581 1613 aa15.88■□□□□ 0.13
LRMDA-205ENST00000488759 RGS17Q9UGC6 210 aaPredicted RBP15.88■□□□□ 0.13
LRMDA-205ENST00000488759 IFT172Q9UG01 1749 aa15.88■□□□□ 0.13
LRMDA-205ENST00000488759 POTEAQ6S8J7 498 aa15.87■□□□□ 0.13
LRMDA-205ENST00000488759 RPGRIP1LQ68CZ1 1315 aa15.86■□□□□ 0.13
LRMDA-205ENST00000488759 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
LRMDA-205ENST00000488759 STK26Q9P289 416 aa15.85■□□□□ 0.13
LRMDA-205ENST00000488759 DDX17Q92841 729 aaKnown RBP15.84■□□□□ 0.13
LRMDA-205ENST00000488759 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
LRMDA-205ENST00000488759 C8orf37Q96NL8 207 aa15.82■□□□□ 0.12
LRMDA-205ENST00000488759 MPHOSPH9Q99550 1183 aa15.82■□□□□ 0.12
LRMDA-205ENST00000488759 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
LRMDA-205ENST00000488759 C1orf167Q5SNV9 1468 aa15.81■□□□□ 0.12
LRMDA-205ENST00000488759 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
LRMDA-205ENST00000488759 KNDC1Q76NI1 1749 aa15.8■□□□□ 0.12
LRMDA-205ENST00000488759 LAMC1P11047 1609 aa15.79■□□□□ 0.12
LRMDA-205ENST00000488759 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
LRMDA-205ENST00000488759 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
LRMDA-205ENST00000488759 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
LRMDA-205ENST00000488759 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
LRMDA-205ENST00000488759 AFF2P51816 1311 aa15.78■□□□□ 0.12
LRMDA-205ENST00000488759 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
LRMDA-205ENST00000488759 ADGRF5Q8IZF2 1346 aa15.77■□□□□ 0.12
LRMDA-205ENST00000488759 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
LRMDA-205ENST00000488759 PNPLA6Q8IY17 1366 aa15.76■□□□□ 0.11
LRMDA-205ENST00000488759 RXRBP28702 533 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms