RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 C3orf80F5H4A9 247 aa8.92□□□□□ -0.98
SRRM1-215ENST00000488317 RAD21O60216 631 aa8.92□□□□□ -0.98
SRRM1-215ENST00000488317 PROX2Q3B8N5 592 aa8.92□□□□□ -0.98
SRRM1-215ENST00000488317 RDH13Q8NBN7 331 aa8.92□□□□□ -0.98
SRRM1-215ENST00000488317 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
SRRM1-215ENST00000488317 TMEM134Q9H6X4 195 aa8.91□□□□□ -0.98
SRRM1-215ENST00000488317 LIMD1Q9UGP4 676 aa8.91□□□□□ -0.98
SRRM1-215ENST00000488317 RFC5P40937 340 aa8.9□□□□□ -0.98
SRRM1-215ENST00000488317 TRAK2O60296 914 aa8.89□□□□□ -0.99
SRRM1-215ENST00000488317 RSPH4AQ5TD94 716 aa8.89□□□□□ -0.99
SRRM1-215ENST00000488317 C1orf115Q9H7X2 142 aa8.89□□□□□ -0.99
SRRM1-215ENST00000488317 KIAA1468Q9P260 1216 aa8.89□□□□□ -0.99
SRRM1-215ENST00000488317 SPTLC1O15269 473 aa8.88□□□□□ -0.99
SRRM1-215ENST00000488317 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
SRRM1-215ENST00000488317 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
SRRM1-215ENST00000488317 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
SRRM1-215ENST00000488317 SPDYE5A6NIY4 337 aa8.87□□□□□ -0.99
SRRM1-215ENST00000488317 RSBN1LQ6PCB5 846 aaPredicted RBP8.87□□□□□ -0.99
SRRM1-215ENST00000488317 ERBB3P21860 1342 aa8.86□□□□□ -0.99
SRRM1-215ENST00000488317 NDUFV2P19404 249 aa8.86□□□□□ -0.99
SRRM1-215ENST00000488317 PSEN2P49810 448 aa8.86□□□□□ -0.99
SRRM1-215ENST00000488317 PROSER2Q86WR7 435 aaPredicted RBP8.86□□□□□ -0.99
SRRM1-215ENST00000488317 POM121Q96HA1 1249 aa8.86□□□□□ -0.99
SRRM1-215ENST00000488317 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
SRRM1-215ENST00000488317 NUTM2BA6NNL0 878 aaPredicted RBP8.85□□□□□ -0.99
SRRM1-215ENST00000488317 NUTM2EB1AL46 878 aaPredicted RBP8.85□□□□□ -0.99
SRRM1-215ENST00000488317 KDM4AO75164 1064 aa8.85□□□□□ -0.99
SRRM1-215ENST00000488317 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
SRRM1-215ENST00000488317 NUTM2DQ5VT03 806 aaPredicted RBP8.85□□□□□ -0.99
SRRM1-215ENST00000488317 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
SRRM1-215ENST00000488317 NUTM2AQ8IVF1 878 aaPredicted RBP8.85□□□□□ -0.99
SRRM1-215ENST00000488317 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
SRRM1-215ENST00000488317 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
SRRM1-215ENST00000488317 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
SRRM1-215ENST00000488317 ZNF777Q9ULD5 760 aaPredicted RBP8.84□□□□□ -0.99
SRRM1-215ENST00000488317 ARHGAP33O14559 1287 aa8.83□□□□□ -1
SRRM1-215ENST00000488317 SLC4A3P48751 1232 aa8.83□□□□□ -1
SRRM1-215ENST00000488317 VARS2Q5ST30 1063 aaKnown RBP8.83□□□□□ -1
SRRM1-215ENST00000488317 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
SRRM1-215ENST00000488317 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
SRRM1-215ENST00000488317 AP1G2O75843 785 aa8.82□□□□□ -1
SRRM1-215ENST00000488317 GJA5P36382 358 aa8.82□□□□□ -1
SRRM1-215ENST00000488317 GCGRP47871 477 aa8.82□□□□□ -1
SRRM1-215ENST00000488317 OTUD5Q96G74 571 aa8.82□□□□□ -1
SRRM1-215ENST00000488317 SEPT9Q9UHD8 586 aaPredicted RBP8.82□□□□□ -1
SRRM1-215ENST00000488317 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
SRRM1-215ENST00000488317 LILRB3O75022 631 aa8.81□□□□□ -1
SRRM1-215ENST00000488317 USP46P62068 366 aa8.81□□□□□ -1
SRRM1-215ENST00000488317 QPCTQ16769 361 aa8.81□□□□□ -1
SRRM1-215ENST00000488317 AXIN2Q9Y2T1 843 aa8.81□□□□□ -1
SRRM1-215ENST00000488317 COG6Q9Y2V7 657 aa8.81□□□□□ -1
SRRM1-215ENST00000488317 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
SRRM1-215ENST00000488317 CABLES1Q8TDN4 633 aa8.8□□□□□ -1
SRRM1-215ENST00000488317 PRM3Q9NNZ6 103 aa8.8□□□□□ -1
SRRM1-215ENST00000488317 FDX1P10109 184 aa8.79□□□□□ -1
SRRM1-215ENST00000488317 CCDC82Q8N4S0 544 aa8.79□□□□□ -1
SRRM1-215ENST00000488317 HOXA2O43364 376 aa8.78□□□□□ -1
SRRM1-215ENST00000488317 SLC10A3P09131 477 aa8.78□□□□□ -1
SRRM1-215ENST00000488317 PRPF38BQ5VTL8 546 aaKnown RBP8.78□□□□□ -1
SRRM1-215ENST00000488317 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
SRRM1-215ENST00000488317 WWC1Q8IX03 1113 aa8.78□□□□□ -1
SRRM1-215ENST00000488317 FNBP4Q8N3X1 1017 aaPredicted RBP8.78□□□□□ -1
SRRM1-215ENST00000488317 SLC4A5Q9BY07 1137 aa8.78□□□□□ -1
SRRM1-215ENST00000488317 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
SRRM1-215ENST00000488317 EMP3P54852 163 aa8.77□□□□□ -1.01
SRRM1-215ENST00000488317 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
SRRM1-215ENST00000488317 SLF2Q8IX21 1173 aa8.77□□□□□ -1.01
SRRM1-215ENST00000488317 MTMR14Q8NCE2 650 aa8.77□□□□□ -1.01
SRRM1-215ENST00000488317 GDPD2Q9HCC8 539 aa8.77□□□□□ -1.01
SRRM1-215ENST00000488317 ZNF330Q9Y3S2 320 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-215ENST00000488317 RNF40O75150 1001 aa8.76□□□□□ -1.01
SRRM1-215ENST00000488317 HRCP23327 699 aa8.76□□□□□ -1.01
SRRM1-215ENST00000488317 PBX2P40425 430 aa8.76□□□□□ -1.01
SRRM1-215ENST00000488317 GRIPAP1Q4V328 841 aa8.76□□□□□ -1.01
SRRM1-215ENST00000488317 CCDC97Q96F63 343 aaPredicted RBP8.76□□□□□ -1.01
SRRM1-215ENST00000488317 ABL2P42684 1182 aa8.75□□□□□ -1.01
SRRM1-215ENST00000488317 GUCA2AQ02747 115 aa8.75□□□□□ -1.01
SRRM1-215ENST00000488317 POTEEQ6S8J3 1075 aa8.75□□□□□ -1.01
SRRM1-215ENST00000488317 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
SRRM1-215ENST00000488317 USP17L8P0C7I0 530 aa8.74□□□□□ -1.01
SRRM1-215ENST00000488317 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
SRRM1-215ENST00000488317 TSC1Q92574 1164 aa8.74□□□□□ -1.01
SRRM1-215ENST00000488317 HLA-CQ95604 372 aa8.74□□□□□ -1.01
SRRM1-215ENST00000488317 MARVELD3Q96A59 401 aa8.74□□□□□ -1.01
SRRM1-215ENST00000488317 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
SRRM1-215ENST00000488317 FAM205CA6NFA0 338 aa8.73□□□□□ -1.01
SRRM1-215ENST00000488317 ST18O60284 1047 aa8.73□□□□□ -1.01
SRRM1-215ENST00000488317 LHX8Q68G74 356 aa8.73□□□□□ -1.01
SRRM1-215ENST00000488317 SERPINA10Q9UK55 444 aa8.73□□□□□ -1.01
SRRM1-215ENST00000488317 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
SRRM1-215ENST00000488317 C6orf229H3BNL8 230 aa8.72□□□□□ -1.01
SRRM1-215ENST00000488317 CFHP08603 1231 aa8.72□□□□□ -1.01
SRRM1-215ENST00000488317 MTMR2Q13614 643 aa8.72□□□□□ -1.01
SRRM1-215ENST00000488317 LAPTM4BQ86VI4 370 aa8.72□□□□□ -1.01
SRRM1-215ENST00000488317 FUT2Q10981 343 aa8.71□□□□□ -1.02
SRRM1-215ENST00000488317 ZNF687Q8N1G0 1237 aa8.71□□□□□ -1.02
SRRM1-215ENST00000488317 TBC1D2BQ9UPU7 963 aa8.71□□□□□ -1.02
SRRM1-215ENST00000488317 CTDSPL2Q05D32 466 aa8.7□□□□□ -1.02
SRRM1-215ENST00000488317 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
SRRM1-215ENST00000488317 HELBQ8NG08 1087 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms