RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 CHD2O14647 1828 aaKnown RBP27.18■■□□□ 1.94
MCF2L-226ENST00000486210 PHLPP1O60346 1717 aa27.18■■□□□ 1.94
MCF2L-226ENST00000486210 ADGRL2O95490 1459 aa27.17■■□□□ 1.94
MCF2L-226ENST00000486210 ZFYVE9O95405 1425 aa27.16■■□□□ 1.94
MCF2L-226ENST00000486210 GCC2Q8IWJ2 1684 aa27.15■■□□□ 1.94
MCF2L-226ENST00000486210 SLC52A1Q9NWF4 448 aa27.15■■□□□ 1.94
MCF2L-226ENST00000486210 MSH6P52701 1360 aa27.14■■□□□ 1.94
MCF2L-226ENST00000486210 SETD1AO15047 1707 aaKnown RBP27.13■■□□□ 1.93
MCF2L-226ENST00000486210 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
MCF2L-226ENST00000486210 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
MCF2L-226ENST00000486210 PLEKHG1Q9ULL1 1385 aa27.11■■□□□ 1.93
MCF2L-226ENST00000486210 SLAIN2Q9P270 581 aa27.11■■□□□ 1.93
MCF2L-226ENST00000486210 TMEM131LA2VDJ0 1609 aa27.11■■□□□ 1.93
MCF2L-226ENST00000486210 BCANQ96GW7 911 aa27.1■■□□□ 1.93
MCF2L-226ENST00000486210 COL16A1Q07092 1604 aaPredicted RBP27.09■■□□□ 1.93
MCF2L-226ENST00000486210 RIMS2Q9UQ26 1411 aa27.08■■□□□ 1.93
MCF2L-226ENST00000486210 JCADQ9P266 1359 aa27.07■■□□□ 1.92
MCF2L-226ENST00000486210 ANKRD50Q9ULJ7 1429 aa27.07■■□□□ 1.92
MCF2L-226ENST00000486210 LRP6O75581 1613 aa27.01■■□□□ 1.92
MCF2L-226ENST00000486210 UNC13BO14795 1591 aa27.01■■□□□ 1.91
MCF2L-226ENST00000486210 ADAMTS13Q76LX8 1427 aa27■■□□□ 1.91
MCF2L-226ENST00000486210 NCOA3Q9Y6Q9 1424 aa27■■□□□ 1.91
MCF2L-226ENST00000486210 SIPA1L2Q9P2F8 1722 aaPredicted RBP27■■□□□ 1.91
MCF2L-226ENST00000486210 PPP1R15AO75807 674 aaPredicted RBP27■■□□□ 1.91
MCF2L-226ENST00000486210 TBX22Q9Y458 520 aa27■■□□□ 1.91
MCF2L-226ENST00000486210 E9PCH4 1651 aa27■■□□□ 1.91
MCF2L-226ENST00000486210 FAM50AQ14320 339 aaKnown RBP26.97■■□□□ 1.91
MCF2L-226ENST00000486210 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
MCF2L-226ENST00000486210 AHDC1Q5TGY3 1603 aaPredicted RBP26.96■■□□□ 1.91
MCF2L-226ENST00000486210 DIP2AQ14689 1571 aa26.96■■□□□ 1.91
MCF2L-226ENST00000486210 SHPRHQ149N8 1683 aa26.95■■□□□ 1.9
MCF2L-226ENST00000486210 NUTM2DQ5VT03 806 aaPredicted RBP26.94■■□□□ 1.9
MCF2L-226ENST00000486210 SPATA31A6Q5VVP1 1343 aa26.92■■□□□ 1.9
MCF2L-226ENST00000486210 CHGAP10645 457 aaKnown RBP26.92■■□□□ 1.9
MCF2L-226ENST00000486210 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.92■■□□□ 1.9
MCF2L-226ENST00000486210 PIK3R4Q99570 1358 aa26.9■■□□□ 1.9
MCF2L-226ENST00000486210 IQGAP3Q86VI3 1631 aa26.9■■□□□ 1.9
MCF2L-226ENST00000486210 C14orf37Q86TY3 774 aa26.89■■□□□ 1.9
MCF2L-226ENST00000486210 C19orf44Q9H6X5 657 aa26.89■■□□□ 1.9
MCF2L-226ENST00000486210 PTPRUQ92729 1446 aa26.89■■□□□ 1.89
MCF2L-226ENST00000486210 CADPS2Q86UW7 1296 aa26.88■■□□□ 1.89
MCF2L-226ENST00000486210 TRPM2O94759 1503 aa26.87■■□□□ 1.89
MCF2L-226ENST00000486210 NRXN3Q9Y4C0 1643 aa26.84■■□□□ 1.89
MCF2L-226ENST00000486210 ATF3P18847 181 aa26.84■■□□□ 1.89
MCF2L-226ENST00000486210 MEX3CQ5U5Q3 659 aaKnown RBP26.84■■□□□ 1.89
MCF2L-226ENST00000486210 ZNF772Q68DY9 489 aaPredicted RBP26.84■■□□□ 1.89
MCF2L-226ENST00000486210 UPF1Q92900 1129 aaKnown RBP eCLIP26.83■■□□□ 1.89
MCF2L-226ENST00000486210 AMOTL2Q9Y2J4 779 aa26.83■■□□□ 1.89
MCF2L-226ENST00000486210 BRINP3Q76B58 766 aa26.82■■□□□ 1.88
MCF2L-226ENST00000486210 XRN1Q8IZH2 1706 aaKnown RBP26.82■■□□□ 1.88
MCF2L-226ENST00000486210 TRIM52Q96A61 297 aa26.81■■□□□ 1.88
MCF2L-226ENST00000486210 ROCK1Q13464 1354 aa26.8■■□□□ 1.88
MCF2L-226ENST00000486210 DCCP43146 1447 aa26.78■■□□□ 1.88
MCF2L-226ENST00000486210 ASXL1Q8IXJ9 1541 aa26.78■■□□□ 1.88
MCF2L-226ENST00000486210 NHSL1Q5SYE7 1610 aa26.77■■□□□ 1.88
MCF2L-226ENST00000486210 SETBP1Q9Y6X0 1596 aa26.76■■□□□ 1.87
MCF2L-226ENST00000486210 MST1RQ04912 1400 aa26.74■■□□□ 1.87
MCF2L-226ENST00000486210 NUP155O75694 1391 aa26.74■■□□□ 1.87
MCF2L-226ENST00000486210 SETD5Q9C0A6 1442 aa26.73■■□□□ 1.87
MCF2L-226ENST00000486210 SPHKAPQ2M3C7 1700 aa26.73■■□□□ 1.87
MCF2L-226ENST00000486210 NUTM2BA6NNL0 878 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-226ENST00000486210 NUTM2EB1AL46 878 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-226ENST00000486210 NUTM2AQ8IVF1 878 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-226ENST00000486210 RXRBP28702 533 aa26.72■■□□□ 1.87
MCF2L-226ENST00000486210 CDK12Q9NYV4 1490 aaPredicted RBP26.71■■□□□ 1.87
MCF2L-226ENST00000486210 METP08581 1390 aa26.7■■□□□ 1.86
MCF2L-226ENST00000486210 AFF2P51816 1311 aa26.68■■□□□ 1.86
MCF2L-226ENST00000486210 NALCNQ8IZF0 1738 aa26.67■■□□□ 1.86
MCF2L-226ENST00000486210 DDX17Q92841 729 aaKnown RBP26.65■■□□□ 1.86
MCF2L-226ENST00000486210 ADGRL3Q9HAR2 1447 aa26.64■■□□□ 1.85
MCF2L-226ENST00000486210 RRBP1Q9P2E9 1410 aaKnown RBP26.64■■□□□ 1.85
MCF2L-226ENST00000486210 NEXMIFQ5QGS0 1516 aa26.63■■□□□ 1.85
MCF2L-226ENST00000486210 PNPLA6Q8IY17 1366 aa26.62■■□□□ 1.85
MCF2L-226ENST00000486210 LRRC59Q96AG4 307 aaKnown RBP26.62■■□□□ 1.85
MCF2L-226ENST00000486210 CLTCL1P53675 1640 aa26.61■■□□□ 1.85
MCF2L-226ENST00000486210 RGS12O14924 1447 aa26.61■■□□□ 1.85
MCF2L-226ENST00000486210 ITGAEP38570 1179 aa26.6■■□□□ 1.85
MCF2L-226ENST00000486210 ZNF326Q5BKZ1 582 aaKnown RBP26.6■■□□□ 1.85
MCF2L-226ENST00000486210 C8orf37Q96NL8 207 aa26.58■■□□□ 1.85
MCF2L-226ENST00000486210 LAMC1P11047 1609 aa26.57■■□□□ 1.84
MCF2L-226ENST00000486210 QTRT2Q9H974 415 aaKnown RBP26.55■■□□□ 1.84
MCF2L-226ENST00000486210 C1orf167Q5SNV9 1468 aa26.55■■□□□ 1.84
MCF2L-226ENST00000486210 KIF1BO60333 1816 aa26.53■■□□□ 1.84
MCF2L-226ENST00000486210 RBM6P78332 1123 aaKnown RBP26.53■■□□□ 1.84
MCF2L-226ENST00000486210 PTCH1Q13635 1447 aa26.48■■□□□ 1.83
MCF2L-226ENST00000486210 ADAMTS2O95450 1211 aa26.47■■□□□ 1.83
MCF2L-226ENST00000486210 ROBO2Q9HCK4 1378 aa26.46■■□□□ 1.83
MCF2L-226ENST00000486210 SOS2Q07890 1332 aaPredicted RBP26.46■■□□□ 1.83
MCF2L-226ENST00000486210 ORAI2Q96SN7 254 aa26.46■■□□□ 1.83
MCF2L-226ENST00000486210 NGLY1Q96IV0 654 aa26.45■■□□□ 1.82
MCF2L-226ENST00000486210 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
MCF2L-226ENST00000486210 COL22A1Q8NFW1 1626 aaPredicted RBP26.42■■□□□ 1.82
MCF2L-226ENST00000486210 PPLO60437 1756 aa26.38■■□□□ 1.81
MCF2L-226ENST00000486210 USP21Q9UK80 565 aa26.38■■□□□ 1.81
MCF2L-226ENST00000486210 NAIPQ13075 1403 aa26.38■■□□□ 1.81
MCF2L-226ENST00000486210 ATAD2Q6PL18 1390 aa26.36■■□□□ 1.81
MCF2L-226ENST00000486210 VGFO15240 615 aaPredicted RBP26.36■■□□□ 1.81
MCF2L-226ENST00000486210 FNBP4Q8N3X1 1017 aaPredicted RBP26.36■■□□□ 1.81
MCF2L-226ENST00000486210 ATRNO75882 1429 aa26.35■■□□□ 1.81
MCF2L-226ENST00000486210 TRPC5Q9UL62 973 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms