RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 FAM135BQ49AJ0 1406 aa28.18■■■□□ 2.1
RHBDF1-209ENST00000486045 RIMS2Q9UQ26 1411 aa28.16■■■□□ 2.1
RHBDF1-209ENST00000486045 NWD1Q149M9 1564 aa28.15■■■□□ 2.1
RHBDF1-209ENST00000486045 NKTRP30414 1462 aaKnown RBP28.15■■■□□ 2.1
RHBDF1-209ENST00000486045 PPP1R15AO75807 674 aaPredicted RBP28.14■■■□□ 2.1
RHBDF1-209ENST00000486045 UNC13BO14795 1591 aa28.14■■■□□ 2.1
RHBDF1-209ENST00000486045 PLEKHG1Q9ULL1 1385 aa28.13■■■□□ 2.09
RHBDF1-209ENST00000486045 CHGAP10645 457 aaKnown RBP28.12■■■□□ 2.09
RHBDF1-209ENST00000486045 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
RHBDF1-209ENST00000486045 TMEM131LA2VDJ0 1609 aa28.11■■■□□ 2.09
RHBDF1-209ENST00000486045 GCC2Q8IWJ2 1684 aa28.1■■■□□ 2.09
RHBDF1-209ENST00000486045 RGS17Q9UGC6 210 aaPredicted RBP28.1■■■□□ 2.09
RHBDF1-209ENST00000486045 ITGAEP38570 1179 aa28.08■■■□□ 2.09
RHBDF1-209ENST00000486045 NUTM2DQ5VT03 806 aaPredicted RBP28.08■■■□□ 2.09
RHBDF1-209ENST00000486045 MYO5BQ9ULV0 1848 aa28.08■■■□□ 2.09
RHBDF1-209ENST00000486045 ROBO1Q9Y6N7 1651 aa28.07■■■□□ 2.08
RHBDF1-209ENST00000486045 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
RHBDF1-209ENST00000486045 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
RHBDF1-209ENST00000486045 MSH6P52701 1360 aa28.07■■■□□ 2.08
RHBDF1-209ENST00000486045 E9PCH4 1651 aa28.06■■■□□ 2.08
RHBDF1-209ENST00000486045 NUP155O75694 1391 aa28.03■■■□□ 2.08
RHBDF1-209ENST00000486045 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
RHBDF1-209ENST00000486045 TBX22Q9Y458 520 aa28.03■■■□□ 2.08
RHBDF1-209ENST00000486045 SLAIN2Q9P270 581 aa28.02■■■□□ 2.08
RHBDF1-209ENST00000486045 IQGAP3Q86VI3 1631 aa28.02■■■□□ 2.08
RHBDF1-209ENST00000486045 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.07
RHBDF1-209ENST00000486045 CHD2O14647 1828 aaKnown RBP27.98■■■□□ 2.07
RHBDF1-209ENST00000486045 C14orf37Q86TY3 774 aa27.94■■■□□ 2.06
RHBDF1-209ENST00000486045 POTEAQ6S8J7 498 aa27.93■■■□□ 2.06
RHBDF1-209ENST00000486045 DIP2AQ14689 1571 aa27.91■■■□□ 2.06
RHBDF1-209ENST00000486045 NCOA3Q9Y6Q9 1424 aa27.91■■■□□ 2.06
RHBDF1-209ENST00000486045 PIK3R4Q99570 1358 aa27.89■■■□□ 2.06
RHBDF1-209ENST00000486045 PHLPP1O60346 1717 aa27.88■■■□□ 2.05
RHBDF1-209ENST00000486045 PTPRUQ92729 1446 aa27.88■■■□□ 2.05
RHBDF1-209ENST00000486045 JCADQ9P266 1359 aa27.87■■■□□ 2.05
RHBDF1-209ENST00000486045 AMOTL2Q9Y2J4 779 aa27.87■■■□□ 2.05
RHBDF1-209ENST00000486045 C19orf44Q9H6X5 657 aa27.85■■■□□ 2.05
RHBDF1-209ENST00000486045 TRPM2O94759 1503 aa27.85■■■□□ 2.05
RHBDF1-209ENST00000486045 CADPS2Q86UW7 1296 aa27.84■■■□□ 2.05
RHBDF1-209ENST00000486045 COL16A1Q07092 1604 aaPredicted RBP27.83■■■□□ 2.05
RHBDF1-209ENST00000486045 ATF3P18847 181 aa27.83■■■□□ 2.05
RHBDF1-209ENST00000486045 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.81■■■□□ 2.04
RHBDF1-209ENST00000486045 ZNF326Q5BKZ1 582 aaKnown RBP27.81■■■□□ 2.04
RHBDF1-209ENST00000486045 NRXN3Q9Y4C0 1643 aa27.79■■■□□ 2.04
RHBDF1-209ENST00000486045 SPHKAPQ2M3C7 1700 aa27.78■■■□□ 2.04
RHBDF1-209ENST00000486045 SETBP1Q9Y6X0 1596 aa27.77■■■□□ 2.04
RHBDF1-209ENST00000486045 METP08581 1390 aa27.76■■■□□ 2.03
RHBDF1-209ENST00000486045 LRP6O75581 1613 aa27.76■■■□□ 2.03
RHBDF1-209ENST00000486045 BRINP3Q76B58 766 aa27.75■■■□□ 2.03
RHBDF1-209ENST00000486045 RRBP1Q9P2E9 1410 aaKnown RBP27.75■■■□□ 2.03
RHBDF1-209ENST00000486045 AHDC1Q5TGY3 1603 aaPredicted RBP27.74■■■□□ 2.03
RHBDF1-209ENST00000486045 XRN1Q8IZH2 1706 aaKnown RBP27.73■■■□□ 2.03
RHBDF1-209ENST00000486045 NAIPQ13075 1403 aa27.73■■■□□ 2.03
RHBDF1-209ENST00000486045 SPATA31A6Q5VVP1 1343 aa27.72■■■□□ 2.03
RHBDF1-209ENST00000486045 CLTCL1P53675 1640 aa27.72■■■□□ 2.03
RHBDF1-209ENST00000486045 DCCP43146 1447 aa27.7■■■□□ 2.03
RHBDF1-209ENST00000486045 NEXMIFQ5QGS0 1516 aa27.69■■■□□ 2.02
RHBDF1-209ENST00000486045 MEX3CQ5U5Q3 659 aaKnown RBP27.69■■■□□ 2.02
RHBDF1-209ENST00000486045 MST1RQ04912 1400 aa27.67■■■□□ 2.02
RHBDF1-209ENST00000486045 ASXL1Q8IXJ9 1541 aa27.66■■■□□ 2.02
RHBDF1-209ENST00000486045 SHPRHQ149N8 1683 aa27.63■■■□□ 2.01
RHBDF1-209ENST00000486045 TRIM52Q96A61 297 aa27.63■■■□□ 2.01
RHBDF1-209ENST00000486045 SETD1AO15047 1707 aaKnown RBP27.63■■■□□ 2.01
RHBDF1-209ENST00000486045 ADGRL3Q9HAR2 1447 aa27.62■■■□□ 2.01
RHBDF1-209ENST00000486045 NUTM2BA6NNL0 878 aaPredicted RBP27.62■■■□□ 2.01
RHBDF1-209ENST00000486045 NUTM2EB1AL46 878 aaPredicted RBP27.62■■■□□ 2.01
RHBDF1-209ENST00000486045 NUTM2AQ8IVF1 878 aaPredicted RBP27.62■■■□□ 2.01
RHBDF1-209ENST00000486045 DDX17Q92841 729 aaKnown RBP27.6■■■□□ 2.01
RHBDF1-209ENST00000486045 ZNF772Q68DY9 489 aaPredicted RBP27.59■■■□□ 2.01
RHBDF1-209ENST00000486045 HFM1A2PYH4 1435 aa27.58■■■□□ 2.01
RHBDF1-209ENST00000486045 SETD5Q9C0A6 1442 aa27.58■■■□□ 2
RHBDF1-209ENST00000486045 SLC4A1APQ9BWU0 796 aaKnown RBP27.55■■■□□ 2
RHBDF1-209ENST00000486045 VGFO15240 615 aaPredicted RBP27.54■■■□□ 2
RHBDF1-209ENST00000486045 NALCNQ8IZF0 1738 aa27.54■■■□□ 2
RHBDF1-209ENST00000486045 KIF1BO60333 1816 aa27.53■■■□□ 2
RHBDF1-209ENST00000486045 NHSL1Q5SYE7 1610 aa27.53■■■□□ 2
RHBDF1-209ENST00000486045 ROBO2Q9HCK4 1378 aa27.53■■■□□ 2
RHBDF1-209ENST00000486045 LRRC59Q96AG4 307 aaKnown RBP27.52■■■□□ 2
RHBDF1-209ENST00000486045 PTCH1Q13635 1447 aa27.51■■□□□ 1.99
RHBDF1-209ENST00000486045 C1orf167Q5SNV9 1468 aa27.51■■□□□ 1.99
RHBDF1-209ENST00000486045 AFF2P51816 1311 aa27.49■■□□□ 1.99
RHBDF1-209ENST00000486045 FOXD1Q16676 465 aa27.49■■□□□ 1.99
RHBDF1-209ENST00000486045 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
RHBDF1-209ENST00000486045 RPGRIP1LQ68CZ1 1315 aa27.48■■□□□ 1.99
RHBDF1-209ENST00000486045 RXRBP28702 533 aa27.47■■□□□ 1.99
RHBDF1-209ENST00000486045 ORAI2Q96SN7 254 aa27.45■■□□□ 1.98
RHBDF1-209ENST00000486045 C8orf37Q96NL8 207 aa27.44■■□□□ 1.98
RHBDF1-209ENST00000486045 UPF1Q92900 1129 aaKnown RBP eCLIP27.43■■□□□ 1.98
RHBDF1-209ENST00000486045 PRAG1Q86YV5 1406 aa27.42■■□□□ 1.98
RHBDF1-209ENST00000486045 PPLO60437 1756 aa27.39■■□□□ 1.98
RHBDF1-209ENST00000486045 ADGRF5Q8IZF2 1346 aa27.39■■□□□ 1.97
RHBDF1-209ENST00000486045 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
RHBDF1-209ENST00000486045 ADAMTS2O95450 1211 aa27.37■■□□□ 1.97
RHBDF1-209ENST00000486045 CDK12Q9NYV4 1490 aaPredicted RBP27.37■■□□□ 1.97
RHBDF1-209ENST00000486045 RGL3Q3MIN7 710 aa27.36■■□□□ 1.97
RHBDF1-209ENST00000486045 CCDC144AA2RUR9 1427 aa27.35■■□□□ 1.97
RHBDF1-209ENST00000486045 QTRT2Q9H974 415 aaKnown RBP27.35■■□□□ 1.97
RHBDF1-209ENST00000486045 LAMC1P11047 1609 aa27.34■■□□□ 1.97
RHBDF1-209ENST00000486045 SPATA31E1Q6ZUB1 1445 aa27.33■■□□□ 1.96
RHBDF1-209ENST00000486045 NGLY1Q96IV0 654 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms