RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 RPRD2Q5VT52 1461 aaKnown RBP25.13■■□□□ 1.61
PDE6D-205ENST00000486044 ROBO1Q9Y6N7 1651 aa25.13■■□□□ 1.61
PDE6D-205ENST00000486044 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
PDE6D-205ENST00000486044 PPP1R15AO75807 674 aaPredicted RBP25.1■■□□□ 1.61
PDE6D-205ENST00000486044 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
PDE6D-205ENST00000486044 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
PDE6D-205ENST00000486044 SLAIN2Q9P270 581 aa25.09■■□□□ 1.61
PDE6D-205ENST00000486044 ANKRD50Q9ULJ7 1429 aa25.09■■□□□ 1.61
PDE6D-205ENST00000486044 PLEKHG1Q9ULL1 1385 aa25.06■■□□□ 1.6
PDE6D-205ENST00000486044 POTEAQ6S8J7 498 aa25.06■■□□□ 1.6
PDE6D-205ENST00000486044 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
PDE6D-205ENST00000486044 RIMS2Q9UQ26 1411 aa25.03■■□□□ 1.6
PDE6D-205ENST00000486044 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
PDE6D-205ENST00000486044 TBX22Q9Y458 520 aa25.02■■□□□ 1.6
PDE6D-205ENST00000486044 CHD2O14647 1828 aaKnown RBP25.01■■□□□ 1.59
PDE6D-205ENST00000486044 JCADQ9P266 1359 aa25.01■■□□□ 1.59
PDE6D-205ENST00000486044 PHLPP1O60346 1717 aa25■■□□□ 1.59
PDE6D-205ENST00000486044 CHGAP10645 457 aaKnown RBP24.99■■□□□ 1.59
PDE6D-205ENST00000486044 C14orf37Q86TY3 774 aa24.99■■□□□ 1.59
PDE6D-205ENST00000486044 MYO5BQ9ULV0 1848 aa24.99■■□□□ 1.59
PDE6D-205ENST00000486044 NCOA3Q9Y6Q9 1424 aa24.99■■□□□ 1.59
PDE6D-205ENST00000486044 GCC2Q8IWJ2 1684 aa24.98■■□□□ 1.59
PDE6D-205ENST00000486044 TMEM131LA2VDJ0 1609 aa24.98■■□□□ 1.59
PDE6D-205ENST00000486044 CADPS2Q86UW7 1296 aa24.94■■□□□ 1.58
PDE6D-205ENST00000486044 C19orf44Q9H6X5 657 aa24.93■■□□□ 1.58
PDE6D-205ENST00000486044 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
PDE6D-205ENST00000486044 ATF3P18847 181 aa24.92■■□□□ 1.58
PDE6D-205ENST00000486044 UNC13BO14795 1591 aa24.92■■□□□ 1.58
PDE6D-205ENST00000486044 SPATA31A6Q5VVP1 1343 aa24.91■■□□□ 1.58
PDE6D-205ENST00000486044 DIP2AQ14689 1571 aa24.89■■□□□ 1.58
PDE6D-205ENST00000486044 NUTM2DQ5VT03 806 aaPredicted RBP24.89■■□□□ 1.58
PDE6D-205ENST00000486044 ADAMTS13Q76LX8 1427 aa24.88■■□□□ 1.57
PDE6D-205ENST00000486044 COL16A1Q07092 1604 aaPredicted RBP24.88■■□□□ 1.57
PDE6D-205ENST00000486044 MEX3CQ5U5Q3 659 aaKnown RBP24.88■■□□□ 1.57
PDE6D-205ENST00000486044 ROCK1Q13464 1354 aa24.87■■□□□ 1.57
PDE6D-205ENST00000486044 E9PCH4 1651 aa24.87■■□□□ 1.57
PDE6D-205ENST00000486044 ZNF772Q68DY9 489 aaPredicted RBP24.85■■□□□ 1.57
PDE6D-205ENST00000486044 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.84■■□□□ 1.57
PDE6D-205ENST00000486044 AMOTL2Q9Y2J4 779 aa24.84■■□□□ 1.57
PDE6D-205ENST00000486044 IQGAP3Q86VI3 1631 aa24.83■■□□□ 1.57
PDE6D-205ENST00000486044 TRPM2O94759 1503 aa24.83■■□□□ 1.57
PDE6D-205ENST00000486044 NUP155O75694 1391 aa24.82■■□□□ 1.56
PDE6D-205ENST00000486044 AHDC1Q5TGY3 1603 aaPredicted RBP24.81■■□□□ 1.56
PDE6D-205ENST00000486044 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
PDE6D-205ENST00000486044 LRP6O75581 1613 aa24.78■■□□□ 1.56
PDE6D-205ENST00000486044 BRINP3Q76B58 766 aa24.77■■□□□ 1.56
PDE6D-205ENST00000486044 SHPRHQ149N8 1683 aa24.77■■□□□ 1.56
PDE6D-205ENST00000486044 DCCP43146 1447 aa24.76■■□□□ 1.55
PDE6D-205ENST00000486044 ITGAEP38570 1179 aa24.74■■□□□ 1.55
PDE6D-205ENST00000486044 PTPRUQ92729 1446 aa24.74■■□□□ 1.55
PDE6D-205ENST00000486044 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
PDE6D-205ENST00000486044 TRIM52Q96A61 297 aa24.73■■□□□ 1.55
PDE6D-205ENST00000486044 NUTM2BA6NNL0 878 aaPredicted RBP24.72■■□□□ 1.55
PDE6D-205ENST00000486044 NUTM2EB1AL46 878 aaPredicted RBP24.72■■□□□ 1.55
PDE6D-205ENST00000486044 RXRBP28702 533 aa24.72■■□□□ 1.55
PDE6D-205ENST00000486044 NUTM2AQ8IVF1 878 aaPredicted RBP24.72■■□□□ 1.55
PDE6D-205ENST00000486044 SETBP1Q9Y6X0 1596 aa24.69■■□□□ 1.54
PDE6D-205ENST00000486044 UPF1Q92900 1129 aaKnown RBP eCLIP24.69■■□□□ 1.54
PDE6D-205ENST00000486044 LRRC59Q96AG4 307 aaKnown RBP24.68■■□□□ 1.54
PDE6D-205ENST00000486044 ASXL1Q8IXJ9 1541 aa24.67■■□□□ 1.54
PDE6D-205ENST00000486044 XRN1Q8IZH2 1706 aaKnown RBP24.67■■□□□ 1.54
PDE6D-205ENST00000486044 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
PDE6D-205ENST00000486044 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
PDE6D-205ENST00000486044 MST1RQ04912 1400 aa24.65■■□□□ 1.54
PDE6D-205ENST00000486044 NRXN3Q9Y4C0 1643 aa24.64■■□□□ 1.54
PDE6D-205ENST00000486044 METP08581 1390 aa24.64■■□□□ 1.53
PDE6D-205ENST00000486044 CDK12Q9NYV4 1490 aaPredicted RBP24.63■■□□□ 1.53
PDE6D-205ENST00000486044 AFF2P51816 1311 aa24.62■■□□□ 1.53
PDE6D-205ENST00000486044 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
PDE6D-205ENST00000486044 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
PDE6D-205ENST00000486044 C8orf37Q96NL8 207 aa24.57■■□□□ 1.52
PDE6D-205ENST00000486044 QTRT2Q9H974 415 aaKnown RBP24.55■■□□□ 1.52
PDE6D-205ENST00000486044 PNPLA6Q8IY17 1366 aa24.54■■□□□ 1.52
PDE6D-205ENST00000486044 VGFO15240 615 aaPredicted RBP24.54■■□□□ 1.52
PDE6D-205ENST00000486044 RBM6P78332 1123 aaKnown RBP24.54■■□□□ 1.52
PDE6D-205ENST00000486044 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
PDE6D-205ENST00000486044 NEXMIFQ5QGS0 1516 aa24.54■■□□□ 1.52
PDE6D-205ENST00000486044 CLTCL1P53675 1640 aa24.53■■□□□ 1.52
PDE6D-205ENST00000486044 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
PDE6D-205ENST00000486044 KIF1BO60333 1816 aa24.51■■□□□ 1.51
PDE6D-205ENST00000486044 NGLY1Q96IV0 654 aa24.51■■□□□ 1.51
PDE6D-205ENST00000486044 NALCNQ8IZF0 1738 aa24.51■■□□□ 1.51
PDE6D-205ENST00000486044 C1orf167Q5SNV9 1468 aa24.5■■□□□ 1.51
PDE6D-205ENST00000486044 ADAMTS2O95450 1211 aa24.48■■□□□ 1.51
PDE6D-205ENST00000486044 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
PDE6D-205ENST00000486044 RGS12O14924 1447 aa24.45■■□□□ 1.51
PDE6D-205ENST00000486044 RPGRIP1LQ68CZ1 1315 aa24.45■■□□□ 1.5
PDE6D-205ENST00000486044 SOS2Q07890 1332 aaPredicted RBP24.44■■□□□ 1.5
PDE6D-205ENST00000486044 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
PDE6D-205ENST00000486044 ROBO2Q9HCK4 1378 aa24.43■■□□□ 1.5
PDE6D-205ENST00000486044 LAMC1P11047 1609 aa24.43■■□□□ 1.5
PDE6D-205ENST00000486044 NAIPQ13075 1403 aa24.43■■□□□ 1.5
PDE6D-205ENST00000486044 USP21Q9UK80 565 aa24.41■■□□□ 1.5
PDE6D-205ENST00000486044 HFM1A2PYH4 1435 aa24.4■■□□□ 1.5
PDE6D-205ENST00000486044 PRAG1Q86YV5 1406 aa24.39■■□□□ 1.5
PDE6D-205ENST00000486044 TRPC5Q9UL62 973 aaPredicted RBP24.39■■□□□ 1.49
PDE6D-205ENST00000486044 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
PDE6D-205ENST00000486044 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
PDE6D-205ENST00000486044 ATAD2Q6PL18 1390 aa24.37■■□□□ 1.49
PDE6D-205ENST00000486044 FNBP4Q8N3X1 1017 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms