RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.68□□□□□ -1.18
RTN4-213ENST00000485749 PPP1R18Q6NYC8 613 aa7.67□□□□□ -1.18
RTN4-213ENST00000485749 PADI6Q6TGC4 694 aa7.67□□□□□ -1.18
RTN4-213ENST00000485749 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
RTN4-213ENST00000485749 TMUB1Q9BVT8 246 aa7.67□□□□□ -1.18
RTN4-213ENST00000485749 PRIM1P49642 420 aaKnown RBP7.66□□□□□ -1.18
RTN4-213ENST00000485749 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
RTN4-213ENST00000485749 KCNV2Q8TDN2 545 aa7.66□□□□□ -1.18
RTN4-213ENST00000485749 NRG2O14511 850 aaPredicted RBP7.65□□□□□ -1.18
RTN4-213ENST00000485749 APLP1P51693 650 aa7.64□□□□□ -1.19
RTN4-213ENST00000485749 BRPF1P55201 1214 aaPredicted RBP7.64□□□□□ -1.19
RTN4-213ENST00000485749 TRAF7Q6Q0C0 670 aa7.64□□□□□ -1.19
RTN4-213ENST00000485749 RBM46Q8TBY0 533 aaKnown RBP7.64□□□□□ -1.19
RTN4-213ENST00000485749 DNAJB2P25686 324 aa7.63□□□□□ -1.19
RTN4-213ENST00000485749 NPDC1Q9NQX5 325 aaPredicted RBP7.63□□□□□ -1.19
RTN4-213ENST00000485749 KMT5BQ4FZB7 885 aa7.62□□□□□ -1.19
RTN4-213ENST00000485749 PCDHB3Q9Y5E6 796 aa7.62□□□□□ -1.19
RTN4-213ENST00000485749 C3orf80F5H4A9 247 aa7.61□□□□□ -1.19
RTN4-213ENST00000485749 ZPR1O75312 459 aa7.61□□□□□ -1.19
RTN4-213ENST00000485749 COPS2P61201 443 aa7.61□□□□□ -1.19
RTN4-213ENST00000485749 ZNF516Q92618 1163 aa7.61□□□□□ -1.19
RTN4-213ENST00000485749 EYA1Q99502 592 aa7.61□□□□□ -1.19
RTN4-213ENST00000485749 RSPH4AQ5TD94 716 aa7.59□□□□□ -1.19
RTN4-213ENST00000485749 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
RTN4-213ENST00000485749 PTGDRQ13258 359 aa7.58□□□□□ -1.2
RTN4-213ENST00000485749 PDZRN3Q9UPQ7 1066 aa7.58□□□□□ -1.2
RTN4-213ENST00000485749 NUTM2FA1L443 756 aa7.57□□□□□ -1.2
RTN4-213ENST00000485749 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
RTN4-213ENST00000485749 FCHSD2O94868 740 aa7.56□□□□□ -1.2
RTN4-213ENST00000485749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.55□□□□□ -1.2
RTN4-213ENST00000485749 OATP04181 439 aa7.55□□□□□ -1.2
RTN4-213ENST00000485749 MLLT3P42568 568 aaPredicted RBP7.55□□□□□ -1.2
RTN4-213ENST00000485749 NEUROD2Q15784 382 aa7.55□□□□□ -1.2
RTN4-213ENST00000485749 NKX2-3Q8TAU0 364 aa7.55□□□□□ -1.2
RTN4-213ENST00000485749 TESPA1A2RU30 521 aaPredicted RBP7.54□□□□□ -1.2
RTN4-213ENST00000485749 ACTN4O43707 911 aaKnown RBP7.54□□□□□ -1.2
RTN4-213ENST00000485749 NR1I2O75469 434 aa7.54□□□□□ -1.2
RTN4-213ENST00000485749 SMYD5Q6GMV2 418 aa7.54□□□□□ -1.2
RTN4-213ENST00000485749 ADGRG1Q9Y653 693 aa7.54□□□□□ -1.2
RTN4-213ENST00000485749 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
RTN4-213ENST00000485749 ANKLE1Q8NAG6 615 aa7.53□□□□□ -1.2
RTN4-213ENST00000485749 SLC19A1P41440 591 aa7.52□□□□□ -1.21
RTN4-213ENST00000485749 BLOC1S3Q6QNY0 202 aa7.52□□□□□ -1.21
RTN4-213ENST00000485749 ZMYND10O75800 440 aa7.51□□□□□ -1.21
RTN4-213ENST00000485749 CFHP08603 1231 aa7.51□□□□□ -1.21
RTN4-213ENST00000485749 SLC24A3Q9HC58 644 aa7.51□□□□□ -1.21
RTN4-213ENST00000485749 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
RTN4-213ENST00000485749 SEMA3EO15041 775 aa7.5□□□□□ -1.21
RTN4-213ENST00000485749 HIC1Q14526 733 aa7.5□□□□□ -1.21
RTN4-213ENST00000485749 ADH1BP00325 375 aa7.49□□□□□ -1.21
RTN4-213ENST00000485749 PKDCCQ504Y2 493 aa7.49□□□□□ -1.21
RTN4-213ENST00000485749 ZNF598Q86UK7 904 aaKnown RBP7.49□□□□□ -1.21
RTN4-213ENST00000485749 PODXL2Q9NZ53 605 aa7.49□□□□□ -1.21
RTN4-213ENST00000485749 SUPT5HO00267 1087 aaKnown RBP7.48□□□□□ -1.21
RTN4-213ENST00000485749 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
RTN4-213ENST00000485749 ZNF787Q6DD87 383 aa7.48□□□□□ -1.21
RTN4-213ENST00000485749 DGAT1O75907 488 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 PRR20EP86478 221 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 PRR20CP86479 221 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 PRR20DP86480 221 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 PRR20BP86481 221 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 PRR20AP86496 221 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 SLC6A16Q9GZN6 736 aa7.47□□□□□ -1.21
RTN4-213ENST00000485749 PXYLP1Q8TE99 480 aa7.46□□□□□ -1.22
RTN4-213ENST00000485749 TLL1O43897 1013 aa7.45□□□□□ -1.22
RTN4-213ENST00000485749 S1PR4O95977 384 aa7.45□□□□□ -1.22
RTN4-213ENST00000485749 BARGINQ6ZT62 677 aa7.45□□□□□ -1.22
RTN4-213ENST00000485749 LCE2BO14633 110 aa7.44□□□□□ -1.22
RTN4-213ENST00000485749 ZNF697Q5TEC3 545 aa7.44□□□□□ -1.22
RTN4-213ENST00000485749 METTL3Q86U44 580 aaKnown RBP7.43□□□□□ -1.22
RTN4-213ENST00000485749 SULF1Q8IWU6 871 aa7.43□□□□□ -1.22
RTN4-213ENST00000485749 GNPATO15228 680 aa7.42□□□□□ -1.22
RTN4-213ENST00000485749 SLC10A3P09131 477 aa7.42□□□□□ -1.22
RTN4-213ENST00000485749 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
RTN4-213ENST00000485749 SCUBE3Q8IX30 993 aa7.42□□□□□ -1.22
RTN4-213ENST00000485749 AK7Q96M32 723 aa7.42□□□□□ -1.22
RTN4-213ENST00000485749 SPSB2Q99619 263 aa7.42□□□□□ -1.22
RTN4-213ENST00000485749 EIF5BO60841 1220 aaKnown RBP7.41□□□□□ -1.22
RTN4-213ENST00000485749 GRIPAP1Q4V328 841 aa7.41□□□□□ -1.22
RTN4-213ENST00000485749 RDH13Q8NBN7 331 aa7.41□□□□□ -1.22
RTN4-213ENST00000485749 ZMYND15Q9H091 742 aa7.41□□□□□ -1.22
RTN4-213ENST00000485749 FAM187AA6NFU0 413 aa7.39□□□□□ -1.23
RTN4-213ENST00000485749 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
RTN4-213ENST00000485749 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
RTN4-213ENST00000485749 RPIAP49247 311 aa7.39□□□□□ -1.23
RTN4-213ENST00000485749 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
RTN4-213ENST00000485749 FMNL1O95466 1100 aaPredicted RBP7.38□□□□□ -1.23
RTN4-213ENST00000485749 ATP6V1AP38606 617 aa7.38□□□□□ -1.23
RTN4-213ENST00000485749 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
RTN4-213ENST00000485749 NPM2Q86SE8 214 aaKnown RBP7.38□□□□□ -1.23
RTN4-213ENST00000485749 RSPH6AQ9H0K4 717 aa7.38□□□□□ -1.23
RTN4-213ENST00000485749 GDF9O60383 454 aa7.37□□□□□ -1.23
RTN4-213ENST00000485749 SALL2Q9Y467 1007 aaPredicted RBP7.37□□□□□ -1.23
RTN4-213ENST00000485749 DDX11L8A8MPP1 907 aa7.36□□□□□ -1.23
RTN4-213ENST00000485749 ZBTB24O43167 697 aaPredicted RBP7.36□□□□□ -1.23
RTN4-213ENST00000485749 PUS10Q3MIT2 529 aaKnown RBP7.36□□□□□ -1.23
RTN4-213ENST00000485749 RBM26Q5T8P6 1007 aaKnown RBP7.36□□□□□ -1.23
RTN4-213ENST00000485749 TNFRSF10AO00220 468 aa7.35□□□□□ -1.23
RTN4-213ENST00000485749 GPIHBP1Q8IV16 184 aa7.35□□□□□ -1.23
RTN4-213ENST00000485749 EMID1Q96A84 441 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms