RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 NKTRP30414 1462 aaKnown RBP29.81■■■□□ 2.36
R3HDM1-215ENST00000483021 KCNA6P17658 529 aa29.8■■■□□ 2.36
R3HDM1-215ENST00000483021 SLC26A8Q96RN1 970 aa29.8■■■□□ 2.36
R3HDM1-215ENST00000483021 HDGFP51858 240 aaKnown RBP29.79■■■□□ 2.36
R3HDM1-215ENST00000483021 RIMS2Q9UQ26 1411 aa29.79■■■□□ 2.36
R3HDM1-215ENST00000483021 PLEKHG1Q9ULL1 1385 aa29.78■■■□□ 2.36
R3HDM1-215ENST00000483021 ITGAEP38570 1179 aa29.78■■■□□ 2.36
R3HDM1-215ENST00000483021 NUP155O75694 1391 aa29.77■■■□□ 2.36
R3HDM1-215ENST00000483021 TMEM94Q12767 1356 aa29.77■■■□□ 2.36
R3HDM1-215ENST00000483021 BCANQ96GW7 911 aa29.76■■■□□ 2.35
R3HDM1-215ENST00000483021 PPP1R15AO75807 674 aaPredicted RBP29.75■■■□□ 2.35
R3HDM1-215ENST00000483021 PPARGC1BQ86YN6 1023 aaKnown RBP29.75■■■□□ 2.35
R3HDM1-215ENST00000483021 CHD2O14647 1828 aaKnown RBP29.74■■■□□ 2.35
R3HDM1-215ENST00000483021 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
R3HDM1-215ENST00000483021 SPHKAPQ2M3C7 1700 aa29.71■■■□□ 2.35
R3HDM1-215ENST00000483021 PROSER2Q86WR7 435 aaPredicted RBP29.7■■■□□ 2.35
R3HDM1-215ENST00000483021 RRBP1Q9P2E9 1410 aaKnown RBP29.7■■■□□ 2.34
R3HDM1-215ENST00000483021 DIP2AQ14689 1571 aa29.69■■■□□ 2.34
R3HDM1-215ENST00000483021 CHGAP10645 457 aaKnown RBP29.69■■■□□ 2.34
R3HDM1-215ENST00000483021 FAM135BQ49AJ0 1406 aa29.68■■■□□ 2.34
R3HDM1-215ENST00000483021 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
R3HDM1-215ENST00000483021 ROBO1Q9Y6N7 1651 aa29.64■■■□□ 2.34
R3HDM1-215ENST00000483021 MSH6P52701 1360 aa29.64■■■□□ 2.33
R3HDM1-215ENST00000483021 TBX22Q9Y458 520 aa29.63■■■□□ 2.33
R3HDM1-215ENST00000483021 ADAMTS13Q76LX8 1427 aa29.61■■■□□ 2.33
R3HDM1-215ENST00000483021 PHF23Q9BUL5 403 aaPredicted RBP29.6■■■□□ 2.33
R3HDM1-215ENST00000483021 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
R3HDM1-215ENST00000483021 TRPM2O94759 1503 aa29.58■■■□□ 2.33
R3HDM1-215ENST00000483021 RBM33Q96EV2 1170 aaKnown RBP29.58■■■□□ 2.33
R3HDM1-215ENST00000483021 NCOA3Q9Y6Q9 1424 aa29.57■■■□□ 2.32
R3HDM1-215ENST00000483021 NAIPQ13075 1403 aa29.56■■■□□ 2.32
R3HDM1-215ENST00000483021 NUTM2DQ5VT03 806 aaPredicted RBP29.54■■■□□ 2.32
R3HDM1-215ENST00000483021 CLTCL1P53675 1640 aa29.51■■■□□ 2.31
R3HDM1-215ENST00000483021 SETBP1Q9Y6X0 1596 aa29.51■■■□□ 2.31
R3HDM1-215ENST00000483021 NRXN3Q9Y4C0 1643 aa29.5■■■□□ 2.31
R3HDM1-215ENST00000483021 KIF1BO60333 1816 aa29.5■■■□□ 2.31
R3HDM1-215ENST00000483021 HFM1A2PYH4 1435 aa29.48■■■□□ 2.31
R3HDM1-215ENST00000483021 PHLPP1O60346 1717 aa29.48■■■□□ 2.31
R3HDM1-215ENST00000483021 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
R3HDM1-215ENST00000483021 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.47■■■□□ 2.31
R3HDM1-215ENST00000483021 ZNF326Q5BKZ1 582 aaKnown RBP29.45■■■□□ 2.31
R3HDM1-215ENST00000483021 C14orf37Q86TY3 774 aa29.45■■■□□ 2.31
R3HDM1-215ENST00000483021 XRN1Q8IZH2 1706 aaKnown RBP29.45■■■□□ 2.3
R3HDM1-215ENST00000483021 NEXMIFQ5QGS0 1516 aa29.43■■■□□ 2.3
R3HDM1-215ENST00000483021 PTPRUQ92729 1446 aa29.41■■■□□ 2.3
R3HDM1-215ENST00000483021 AMOTL2Q9Y2J4 779 aa29.4■■■□□ 2.3
R3HDM1-215ENST00000483021 CADPS2Q86UW7 1296 aa29.39■■■□□ 2.3
R3HDM1-215ENST00000483021 C19orf44Q9H6X5 657 aa29.39■■■□□ 2.3
R3HDM1-215ENST00000483021 COL16A1Q07092 1604 aaPredicted RBP29.37■■■□□ 2.29
R3HDM1-215ENST00000483021 ATF3P18847 181 aa29.36■■■□□ 2.29
R3HDM1-215ENST00000483021 TRIM52Q96A61 297 aa29.36■■■□□ 2.29
R3HDM1-215ENST00000483021 DCCP43146 1447 aa29.36■■■□□ 2.29
R3HDM1-215ENST00000483021 JCADQ9P266 1359 aa29.34■■■□□ 2.29
R3HDM1-215ENST00000483021 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
R3HDM1-215ENST00000483021 METP08581 1390 aa29.3■■■□□ 2.28
R3HDM1-215ENST00000483021 SLC4A1APQ9BWU0 796 aaKnown RBP29.3■■■□□ 2.28
R3HDM1-215ENST00000483021 RGS17Q9UGC6 210 aaPredicted RBP29.3■■■□□ 2.28
R3HDM1-215ENST00000483021 SETD1AO15047 1707 aaKnown RBP29.26■■■□□ 2.27
R3HDM1-215ENST00000483021 PPLO60437 1756 aa29.26■■■□□ 2.27
R3HDM1-215ENST00000483021 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
R3HDM1-215ENST00000483021 VGFO15240 615 aaPredicted RBP29.24■■■□□ 2.27
R3HDM1-215ENST00000483021 NALCNQ8IZF0 1738 aa29.24■■■□□ 2.27
R3HDM1-215ENST00000483021 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
R3HDM1-215ENST00000483021 ADGRL3Q9HAR2 1447 aa29.23■■■□□ 2.27
R3HDM1-215ENST00000483021 ASXL1Q8IXJ9 1541 aa29.21■■■□□ 2.27
R3HDM1-215ENST00000483021 SPATA31A6Q5VVP1 1343 aa29.2■■■□□ 2.27
R3HDM1-215ENST00000483021 MST1RQ04912 1400 aa29.2■■■□□ 2.27
R3HDM1-215ENST00000483021 BRINP3Q76B58 766 aa29.2■■■□□ 2.26
R3HDM1-215ENST00000483021 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.26
R3HDM1-215ENST00000483021 PTCH1Q13635 1447 aa29.2■■■□□ 2.26
R3HDM1-215ENST00000483021 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
R3HDM1-215ENST00000483021 CCDC144AA2RUR9 1427 aa29.14■■■□□ 2.26
R3HDM1-215ENST00000483021 POTEAQ6S8J7 498 aa29.14■■■□□ 2.26
R3HDM1-215ENST00000483021 LRP6O75581 1613 aa29.13■■■□□ 2.25
R3HDM1-215ENST00000483021 IFT172Q9UG01 1749 aa29.11■■■□□ 2.25
R3HDM1-215ENST00000483021 ACIN1Q9UKV3 1341 aaKnown RBP29.1■■■□□ 2.25
R3HDM1-215ENST00000483021 SETD5Q9C0A6 1442 aa29.1■■■□□ 2.25
R3HDM1-215ENST00000483021 FOXD1Q16676 465 aa29.09■■■□□ 2.25
R3HDM1-215ENST00000483021 MEX3CQ5U5Q3 659 aaKnown RBP29.07■■■□□ 2.24
R3HDM1-215ENST00000483021 MPHOSPH9Q99550 1183 aa29.07■■■□□ 2.24
R3HDM1-215ENST00000483021 ROBO2Q9HCK4 1378 aa29.07■■■□□ 2.24
R3HDM1-215ENST00000483021 SPATA31E1Q6ZUB1 1445 aa29.06■■■□□ 2.24
R3HDM1-215ENST00000483021 LAMC1P11047 1609 aa29.04■■■□□ 2.24
R3HDM1-215ENST00000483021 C1orf167Q5SNV9 1468 aa29.04■■■□□ 2.24
R3HDM1-215ENST00000483021 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
R3HDM1-215ENST00000483021 ZNF772Q68DY9 489 aaPredicted RBP29.01■■■□□ 2.23
R3HDM1-215ENST00000483021 LRRC59Q96AG4 307 aaKnown RBP29.01■■■□□ 2.23
R3HDM1-215ENST00000483021 CDC42BPGQ6DT37 1551 aa28.99■■■□□ 2.23
R3HDM1-215ENST00000483021 KNDC1Q76NI1 1749 aa28.98■■■□□ 2.23
R3HDM1-215ENST00000483021 ADGRF5Q8IZF2 1346 aa28.97■■■□□ 2.23
R3HDM1-215ENST00000483021 RGL3Q3MIN7 710 aa28.97■■■□□ 2.23
R3HDM1-215ENST00000483021 TECPR2O15040 1411 aa28.95■■■□□ 2.23
R3HDM1-215ENST00000483021 PIK3C2GO75747 1445 aa28.94■■■□□ 2.22
R3HDM1-215ENST00000483021 PNPLA6Q8IY17 1366 aa28.94■■■□□ 2.22
R3HDM1-215ENST00000483021 NUTM2BA6NNL0 878 aaPredicted RBP28.94■■■□□ 2.22
R3HDM1-215ENST00000483021 NUTM2EB1AL46 878 aaPredicted RBP28.94■■■□□ 2.22
R3HDM1-215ENST00000483021 NUTM2AQ8IVF1 878 aaPredicted RBP28.94■■■□□ 2.22
R3HDM1-215ENST00000483021 DDX17Q92841 729 aaKnown RBP28.92■■■□□ 2.22
R3HDM1-215ENST00000483021 LRPPRCP42704 1394 aaKnown RBP28.9■■■□□ 2.22
R3HDM1-215ENST00000483021 ORAI2Q96SN7 254 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms