RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
HDAC6-224ENST00000481929 LRP6O75581 1613 aa23.66■■□□□ 1.38
HDAC6-224ENST00000481929 TRIM52Q96A61 297 aa23.66■■□□□ 1.38
HDAC6-224ENST00000481929 ABCC5O15440 1437 aa23.66■■□□□ 1.38
HDAC6-224ENST00000481929 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
HDAC6-224ENST00000481929 NOS1P29475 1434 aa23.65■■□□□ 1.38
HDAC6-224ENST00000481929 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
HDAC6-224ENST00000481929 PLEKHG1Q9ULL1 1385 aa23.61■■□□□ 1.37
HDAC6-224ENST00000481929 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
HDAC6-224ENST00000481929 DAPK1P53355 1430 aa23.59■■□□□ 1.37
HDAC6-224ENST00000481929 NCOA3Q9Y6Q9 1424 aa23.59■■□□□ 1.37
HDAC6-224ENST00000481929 PPP1R15AO75807 674 aaPredicted RBP23.59■■□□□ 1.37
HDAC6-224ENST00000481929 C14orf37Q86TY3 774 aa23.59■■□□□ 1.37
HDAC6-224ENST00000481929 RXRBP28702 533 aa23.58■■□□□ 1.37
HDAC6-224ENST00000481929 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
HDAC6-224ENST00000481929 AHDC1Q5TGY3 1603 aaPredicted RBP23.57■■□□□ 1.36
HDAC6-224ENST00000481929 PTPN23Q9H3S7 1636 aa23.57■■□□□ 1.36
HDAC6-224ENST00000481929 ZFYVE9O95405 1425 aa23.57■■□□□ 1.36
HDAC6-224ENST00000481929 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
HDAC6-224ENST00000481929 HDGFP51858 240 aaKnown RBP23.56■■□□□ 1.36
HDAC6-224ENST00000481929 CADPS2Q86UW7 1296 aa23.55■■□□□ 1.36
HDAC6-224ENST00000481929 RIMS2Q9UQ26 1411 aa23.55■■□□□ 1.36
HDAC6-224ENST00000481929 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
HDAC6-224ENST00000481929 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
HDAC6-224ENST00000481929 ATF3P18847 181 aa23.52■■□□□ 1.36
HDAC6-224ENST00000481929 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
HDAC6-224ENST00000481929 RPRD2Q5VT52 1461 aaKnown RBP23.51■■□□□ 1.35
HDAC6-224ENST00000481929 C19orf44Q9H6X5 657 aa23.51■■□□□ 1.35
HDAC6-224ENST00000481929 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
HDAC6-224ENST00000481929 GCC2Q8IWJ2 1684 aa23.49■■□□□ 1.35
HDAC6-224ENST00000481929 NUTM2BA6NNL0 878 aaPredicted RBP23.49■■□□□ 1.35
HDAC6-224ENST00000481929 NUTM2EB1AL46 878 aaPredicted RBP23.49■■□□□ 1.35
HDAC6-224ENST00000481929 NUTM2AQ8IVF1 878 aaPredicted RBP23.49■■□□□ 1.35
HDAC6-224ENST00000481929 MYO5BQ9ULV0 1848 aa23.49■■□□□ 1.35
HDAC6-224ENST00000481929 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.48■■□□□ 1.35
HDAC6-224ENST00000481929 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
HDAC6-224ENST00000481929 AFF2P51816 1311 aa23.46■■□□□ 1.35
HDAC6-224ENST00000481929 DIP2AQ14689 1571 aa23.46■■□□□ 1.35
HDAC6-224ENST00000481929 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
HDAC6-224ENST00000481929 BRINP3Q76B58 766 aa23.45■■□□□ 1.34
HDAC6-224ENST00000481929 ADAMTS13Q76LX8 1427 aa23.44■■□□□ 1.34
HDAC6-224ENST00000481929 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
HDAC6-224ENST00000481929 ADGRL2O95490 1459 aa23.4■■□□□ 1.34
HDAC6-224ENST00000481929 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
HDAC6-224ENST00000481929 RGS12O14924 1447 aa23.39■■□□□ 1.33
HDAC6-224ENST00000481929 DCCP43146 1447 aa23.39■■□□□ 1.33
HDAC6-224ENST00000481929 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.33
HDAC6-224ENST00000481929 TRPM2O94759 1503 aa23.38■■□□□ 1.33
HDAC6-224ENST00000481929 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
HDAC6-224ENST00000481929 APLP2Q06481 763 aa23.38■■□□□ 1.33
HDAC6-224ENST00000481929 ANKRD50Q9ULJ7 1429 aa23.37■■□□□ 1.33
HDAC6-224ENST00000481929 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
HDAC6-224ENST00000481929 RBM6P78332 1123 aaKnown RBP23.36■■□□□ 1.33
HDAC6-224ENST00000481929 C8orf37Q96NL8 207 aa23.35■■□□□ 1.33
HDAC6-224ENST00000481929 QTRT2Q9H974 415 aaKnown RBP23.35■■□□□ 1.33
HDAC6-224ENST00000481929 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
HDAC6-224ENST00000481929 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
HDAC6-224ENST00000481929 SRCAPQ6ZRS2 3230 aa23.33■■□□□ 1.33
HDAC6-224ENST00000481929 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.32
HDAC6-224ENST00000481929 MST1RQ04912 1400 aa23.32■■□□□ 1.32
HDAC6-224ENST00000481929 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
HDAC6-224ENST00000481929 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
HDAC6-224ENST00000481929 UNC13BO14795 1591 aa23.29■■□□□ 1.32
HDAC6-224ENST00000481929 NGLY1Q96IV0 654 aa23.28■■□□□ 1.32
HDAC6-224ENST00000481929 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.32
HDAC6-224ENST00000481929 XRN1Q8IZH2 1706 aaKnown RBP23.27■■□□□ 1.32
HDAC6-224ENST00000481929 E9PCH4 1651 aa23.26■■□□□ 1.31
HDAC6-224ENST00000481929 FOXD1Q16676 465 aa23.26■■□□□ 1.31
HDAC6-224ENST00000481929 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
HDAC6-224ENST00000481929 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
HDAC6-224ENST00000481929 ADAMTS2O95450 1211 aa23.22■■□□□ 1.31
HDAC6-224ENST00000481929 ZRANB1Q9UGI0 708 aa23.21■■□□□ 1.31
HDAC6-224ENST00000481929 ADGRL3Q9HAR2 1447 aa23.21■■□□□ 1.31
HDAC6-224ENST00000481929 NRXN3Q9Y4C0 1643 aa23.2■■□□□ 1.3
HDAC6-224ENST00000481929 SETBP1Q9Y6X0 1596 aa23.2■■□□□ 1.3
HDAC6-224ENST00000481929 IQGAP3Q86VI3 1631 aa23.18■■□□□ 1.3
HDAC6-224ENST00000481929 USP21Q9UK80 565 aa23.17■■□□□ 1.3
HDAC6-224ENST00000481929 TRPC5Q9UL62 973 aaPredicted RBP23.17■■□□□ 1.3
HDAC6-224ENST00000481929 METP08581 1390 aa23.16■■□□□ 1.3
HDAC6-224ENST00000481929 NALCNQ8IZF0 1738 aa23.14■■□□□ 1.3
HDAC6-224ENST00000481929 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
HDAC6-224ENST00000481929 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
HDAC6-224ENST00000481929 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
HDAC6-224ENST00000481929 NUP155O75694 1391 aa23.11■■□□□ 1.29
HDAC6-224ENST00000481929 LAMC1P11047 1609 aa23.11■■□□□ 1.29
HDAC6-224ENST00000481929 ATRNO75882 1429 aa23.1■■□□□ 1.29
HDAC6-224ENST00000481929 FNBP4Q8N3X1 1017 aaPredicted RBP23.1■■□□□ 1.29
HDAC6-224ENST00000481929 SOS2Q07890 1332 aaPredicted RBP23.09■■□□□ 1.29
HDAC6-224ENST00000481929 CCDC125Q86Z20 511 aa23.09■■□□□ 1.29
HDAC6-224ENST00000481929 ROCK1Q13464 1354 aa23.07■■□□□ 1.28
HDAC6-224ENST00000481929 ORAI2Q96SN7 254 aa23.05■■□□□ 1.28
HDAC6-224ENST00000481929 SPHKAPQ2M3C7 1700 aa23.04■■□□□ 1.28
HDAC6-224ENST00000481929 EP400Q96L91 3159 aa23.04■■□□□ 1.28
HDAC6-224ENST00000481929 COL22A1Q8NFW1 1626 aaPredicted RBP23.02■■□□□ 1.28
HDAC6-224ENST00000481929 NEXMIFQ5QGS0 1516 aa23.01■■□□□ 1.27
HDAC6-224ENST00000481929 MYOM2P54296 1465 aa22.99■■□□□ 1.27
HDAC6-224ENST00000481929 BCL9LQ86UU0 1499 aa22.98■■□□□ 1.27
HDAC6-224ENST00000481929 ROBO2Q9HCK4 1378 aa22.97■■□□□ 1.27
HDAC6-224ENST00000481929 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
HDAC6-224ENST00000481929 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms