RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 ANKRD50Q9ULJ7 1429 aa14.59□□□□□ -0.07
GTF3C2-210ENST00000480989 E9PCH4 1651 aa14.59□□□□□ -0.07
GTF3C2-210ENST00000480989 NKTRP30414 1462 aaKnown RBP14.59□□□□□ -0.07
GTF3C2-210ENST00000480989 RPRD2Q5VT52 1461 aaKnown RBP14.58□□□□□ -0.08
GTF3C2-210ENST00000480989 KCNA6P17658 529 aa14.58□□□□□ -0.08
GTF3C2-210ENST00000480989 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
GTF3C2-210ENST00000480989 APLP2Q06481 763 aa14.56□□□□□ -0.08
GTF3C2-210ENST00000480989 RIMS2Q9UQ26 1411 aa14.55□□□□□ -0.08
GTF3C2-210ENST00000480989 SLC52A1Q9NWF4 448 aa14.54□□□□□ -0.08
GTF3C2-210ENST00000480989 PLEKHG1Q9ULL1 1385 aa14.54□□□□□ -0.08
GTF3C2-210ENST00000480989 ADAMTS13Q76LX8 1427 aa14.54□□□□□ -0.08
GTF3C2-210ENST00000480989 IQGAP3Q86VI3 1631 aa14.54□□□□□ -0.08
GTF3C2-210ENST00000480989 FAM50AQ14320 339 aaKnown RBP14.53□□□□□ -0.08
GTF3C2-210ENST00000480989 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
GTF3C2-210ENST00000480989 PHLPP1O60346 1717 aa14.52□□□□□ -0.08
GTF3C2-210ENST00000480989 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.08
GTF3C2-210ENST00000480989 POTEAQ6S8J7 498 aa14.52□□□□□ -0.09
GTF3C2-210ENST00000480989 SETD1AO15047 1707 aaKnown RBP14.5□□□□□ -0.09
GTF3C2-210ENST00000480989 NRXN3Q9Y4C0 1643 aa14.5□□□□□ -0.09
GTF3C2-210ENST00000480989 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
GTF3C2-210ENST00000480989 PTPRUQ92729 1446 aa14.48□□□□□ -0.09
GTF3C2-210ENST00000480989 LRP6O75581 1613 aa14.48□□□□□ -0.09
GTF3C2-210ENST00000480989 MSH6P52701 1360 aa14.47□□□□□ -0.09
GTF3C2-210ENST00000480989 NUTM2DQ5VT03 806 aaPredicted RBP14.47□□□□□ -0.09
GTF3C2-210ENST00000480989 DIP2AQ14689 1571 aa14.47□□□□□ -0.09
GTF3C2-210ENST00000480989 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
GTF3C2-210ENST00000480989 XRN1Q8IZH2 1706 aaKnown RBP14.45□□□□□ -0.1
GTF3C2-210ENST00000480989 SLAIN2Q9P270 581 aa14.45□□□□□ -0.1
GTF3C2-210ENST00000480989 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
GTF3C2-210ENST00000480989 AHDC1Q5TGY3 1603 aaPredicted RBP14.44□□□□□ -0.1
GTF3C2-210ENST00000480989 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
GTF3C2-210ENST00000480989 BCANQ96GW7 911 aa14.43□□□□□ -0.1
GTF3C2-210ENST00000480989 NCOA3Q9Y6Q9 1424 aa14.42□□□□□ -0.1
GTF3C2-210ENST00000480989 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
GTF3C2-210ENST00000480989 SHPRHQ149N8 1683 aa14.42□□□□□ -0.1
GTF3C2-210ENST00000480989 TRPM2O94759 1503 aa14.41□□□□□ -0.1
GTF3C2-210ENST00000480989 CHGAP10645 457 aaKnown RBP14.41□□□□□ -0.1
GTF3C2-210ENST00000480989 JCADQ9P266 1359 aa14.41□□□□□ -0.1
GTF3C2-210ENST00000480989 SETBP1Q9Y6X0 1596 aa14.41□□□□□ -0.1
GTF3C2-210ENST00000480989 NUP155O75694 1391 aa14.4□□□□□ -0.1
GTF3C2-210ENST00000480989 PIK3R4Q99570 1358 aa14.4□□□□□ -0.1
GTF3C2-210ENST00000480989 CLTCL1P53675 1640 aa14.4□□□□□ -0.1
GTF3C2-210ENST00000480989 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
GTF3C2-210ENST00000480989 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
GTF3C2-210ENST00000480989 NEXMIFQ5QGS0 1516 aa14.37□□□□□ -0.11
GTF3C2-210ENST00000480989 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
GTF3C2-210ENST00000480989 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
GTF3C2-210ENST00000480989 METP08581 1390 aa14.36□□□□□ -0.11
GTF3C2-210ENST00000480989 AMOTL2Q9Y2J4 779 aa14.36□□□□□ -0.11
GTF3C2-210ENST00000480989 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
GTF3C2-210ENST00000480989 MST1RQ04912 1400 aa14.35□□□□□ -0.11
GTF3C2-210ENST00000480989 ITGAEP38570 1179 aa14.35□□□□□ -0.11
GTF3C2-210ENST00000480989 BRINP3Q76B58 766 aa14.35□□□□□ -0.11
GTF3C2-210ENST00000480989 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
GTF3C2-210ENST00000480989 HDGFP51858 240 aaKnown RBP14.34□□□□□ -0.11
GTF3C2-210ENST00000480989 DCCP43146 1447 aa14.33□□□□□ -0.11
GTF3C2-210ENST00000480989 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.12
GTF3C2-210ENST00000480989 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
GTF3C2-210ENST00000480989 SPATA31A6Q5VVP1 1343 aa14.32□□□□□ -0.12
GTF3C2-210ENST00000480989 ATF3P18847 181 aa14.3□□□□□ -0.12
GTF3C2-210ENST00000480989 NAIPQ13075 1403 aa14.3□□□□□ -0.12
GTF3C2-210ENST00000480989 SETD5Q9C0A6 1442 aa14.3□□□□□ -0.12
GTF3C2-210ENST00000480989 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
GTF3C2-210ENST00000480989 KIF1BO60333 1816 aa14.29□□□□□ -0.12
GTF3C2-210ENST00000480989 DDX17Q92841 729 aaKnown RBP14.29□□□□□ -0.12
GTF3C2-210ENST00000480989 ADGRL3Q9HAR2 1447 aa14.29□□□□□ -0.12
GTF3C2-210ENST00000480989 LAMC1P11047 1609 aa14.28□□□□□ -0.12
GTF3C2-210ENST00000480989 PPLO60437 1756 aa14.26□□□□□ -0.13
GTF3C2-210ENST00000480989 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
GTF3C2-210ENST00000480989 UPF1Q92900 1129 aaKnown RBP eCLIP14.25□□□□□ -0.13
GTF3C2-210ENST00000480989 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
GTF3C2-210ENST00000480989 TRIM52Q96A61 297 aa14.24□□□□□ -0.13
GTF3C2-210ENST00000480989 C1orf167Q5SNV9 1468 aa14.24□□□□□ -0.13
GTF3C2-210ENST00000480989 PTCH1Q13635 1447 aa14.24□□□□□ -0.13
GTF3C2-210ENST00000480989 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
GTF3C2-210ENST00000480989 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
GTF3C2-210ENST00000480989 NUTM2BA6NNL0 878 aaPredicted RBP14.23□□□□□ -0.13
GTF3C2-210ENST00000480989 NUTM2EB1AL46 878 aaPredicted RBP14.23□□□□□ -0.13
GTF3C2-210ENST00000480989 MEX3CQ5U5Q3 659 aaKnown RBP14.23□□□□□ -0.13
GTF3C2-210ENST00000480989 NUTM2AQ8IVF1 878 aaPredicted RBP14.23□□□□□ -0.13
GTF3C2-210ENST00000480989 AFF2P51816 1311 aa14.22□□□□□ -0.13
GTF3C2-210ENST00000480989 ZNF772Q68DY9 489 aaPredicted RBP14.22□□□□□ -0.13
GTF3C2-210ENST00000480989 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
GTF3C2-210ENST00000480989 RGS12O14924 1447 aa14.21□□□□□ -0.13
GTF3C2-210ENST00000480989 FOXD1Q16676 465 aa14.2□□□□□ -0.14
GTF3C2-210ENST00000480989 HFM1A2PYH4 1435 aa14.2□□□□□ -0.14
GTF3C2-210ENST00000480989 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
GTF3C2-210ENST00000480989 ORAI2Q96SN7 254 aa14.18□□□□□ -0.14
GTF3C2-210ENST00000480989 COL22A1Q8NFW1 1626 aaPredicted RBP14.18□□□□□ -0.14
GTF3C2-210ENST00000480989 RXRBP28702 533 aa14.17□□□□□ -0.14
GTF3C2-210ENST00000480989 LRRC59Q96AG4 307 aaKnown RBP14.17□□□□□ -0.14
GTF3C2-210ENST00000480989 SOS2Q07890 1332 aaPredicted RBP14.16□□□□□ -0.14
GTF3C2-210ENST00000480989 C8orf37Q96NL8 207 aa14.16□□□□□ -0.14
GTF3C2-210ENST00000480989 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
GTF3C2-210ENST00000480989 EP400Q96L91 3159 aa14.14□□□□□ -0.15
GTF3C2-210ENST00000480989 PXDNQ92626 1479 aa14.14□□□□□ -0.15
GTF3C2-210ENST00000480989 MYOM2P54296 1465 aa14.13□□□□□ -0.15
GTF3C2-210ENST00000480989 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
GTF3C2-210ENST00000480989 SPATA31E1Q6ZUB1 1445 aa14.13□□□□□ -0.15
GTF3C2-210ENST00000480989 ADGRF5Q8IZF2 1346 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms