RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
FN1-221ENST00000480737 FAM161AQ3B820 660 aa8.38□□□□□ -1.07
FN1-221ENST00000480737 FECHP22830 423 aa8.37□□□□□ -1.07
FN1-221ENST00000480737 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
FN1-221ENST00000480737 PRR14Q9BWN1 585 aa8.37□□□□□ -1.07
FN1-221ENST00000480737 RNF40O75150 1001 aa8.36□□□□□ -1.07
FN1-221ENST00000480737 GPIHBP1Q8IV16 184 aa8.36□□□□□ -1.07
FN1-221ENST00000480737 ACTN4O43707 911 aaKnown RBP8.33□□□□□ -1.08
FN1-221ENST00000480737 SLC10A3P09131 477 aa8.33□□□□□ -1.08
FN1-221ENST00000480737 ZNF516Q92618 1163 aa8.32□□□□□ -1.08
FN1-221ENST00000480737 CFHP08603 1231 aa8.3□□□□□ -1.08
FN1-221ENST00000480737 PHOX2BQ99453 314 aa8.3□□□□□ -1.08
FN1-221ENST00000480737 PCDHB3Q9Y5E6 796 aa8.3□□□□□ -1.08
FN1-221ENST00000480737 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
FN1-221ENST00000480737 ZPR1O75312 459 aa8.29□□□□□ -1.08
FN1-221ENST00000480737 MAP2K5Q13163 448 aa8.29□□□□□ -1.08
FN1-221ENST00000480737 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
FN1-221ENST00000480737 DAXXQ9UER7 740 aaPredicted RBP8.29□□□□□ -1.08
FN1-221ENST00000480737 COPS2P61201 443 aa8.27□□□□□ -1.09
FN1-221ENST00000480737 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
FN1-221ENST00000480737 BLOC1S3Q6QNY0 202 aa8.27□□□□□ -1.09
FN1-221ENST00000480737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.096e-7■■□□□ 13.7
FN1-221ENST00000480737 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
FN1-221ENST00000480737 TMUB1Q9BVT8 246 aa8.25□□□□□ -1.09
FN1-221ENST00000480737 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
FN1-221ENST00000480737 RSPH4AQ5TD94 716 aa8.24□□□□□ -1.09
FN1-221ENST00000480737 MINK1Q8N4C8 1332 aaPredicted RBP8.24□□□□□ -1.09
FN1-221ENST00000480737 IRF6O14896 467 aa8.23□□□□□ -1.09
FN1-221ENST00000480737 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
FN1-221ENST00000480737 V9GY48 417 aaPredicted RBP8.23□□□□□ -1.09
FN1-221ENST00000480737 IRX2Q9BZI1 471 aaPredicted RBP8.22□□□□□ -1.09
FN1-221ENST00000480737 TLL1O43897 1013 aa8.21□□□□□ -1.1
FN1-221ENST00000480737 NLRP7Q8WX94 980 aa8.21□□□□□ -1.1
FN1-221ENST00000480737 NR1I2O75469 434 aa8.2□□□□□ -1.1
FN1-221ENST00000480737 ADH1BP00325 375 aa8.2□□□□□ -1.1
FN1-221ENST00000480737 GGCXP38435 758 aa8.2□□□□□ -1.1
FN1-221ENST00000480737 GCGRP47871 477 aa8.2□□□□□ -1.1
FN1-221ENST00000480737 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
FN1-221ENST00000480737 MORN1Q5T089 497 aa8.19□□□□□ -1.1
FN1-221ENST00000480737 LMOD2Q6P5Q4 547 aa8.19□□□□□ -1.1
FN1-221ENST00000480737 CCDC102AQ96A19 550 aa8.19□□□□□ -1.1
FN1-221ENST00000480737 CD46P15529 392 aa8.18□□□□□ -1.1
FN1-221ENST00000480737 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
FN1-221ENST00000480737 RDH13Q8NBN7 331 aa8.18□□□□□ -1.1
FN1-221ENST00000480737 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
FN1-221ENST00000480737 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
FN1-221ENST00000480737 FUT2Q10981 343 aa8.17□□□□□ -1.1
FN1-221ENST00000480737 ANKLE1Q8NAG6 615 aa8.17□□□□□ -1.1
FN1-221ENST00000480737 THAP11Q96EK4 314 aa8.17□□□□□ -1.1
FN1-221ENST00000480737 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
FN1-221ENST00000480737 ATP6V1AP38606 617 aa8.16□□□□□ -1.1
FN1-221ENST00000480737 BARGINQ6ZT62 677 aa8.16□□□□□ -1.1
FN1-221ENST00000480737 EMID1Q96A84 441 aaPredicted RBP8.16□□□□□ -1.1
FN1-221ENST00000480737 ZMYND10O75800 440 aa8.15□□□□□ -1.1
FN1-221ENST00000480737 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
FN1-221ENST00000480737 S1PR4O95977 384 aa8.14□□□□□ -1.11
FN1-221ENST00000480737 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
FN1-221ENST00000480737 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
FN1-221ENST00000480737 GPCPD1Q9NPB8 672 aa8.13□□□□□ -1.11
FN1-221ENST00000480737 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
FN1-221ENST00000480737 SPSB2Q99619 263 aa8.12□□□□□ -1.11
FN1-221ENST00000480737 SLC6A16Q9GZN6 736 aa8.12□□□□□ -1.11
FN1-221ENST00000480737 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
FN1-221ENST00000480737 SLC27A5Q9Y2P5 690 aa8.12□□□□□ -1.11
FN1-221ENST00000480737 CLCN1P35523 988 aa8.11□□□□□ -1.11
FN1-221ENST00000480737 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
FN1-221ENST00000480737 AMHR2Q16671 573 aa8.1□□□□□ -1.11
FN1-221ENST00000480737 MSS51Q4VC12 460 aa8.1□□□□□ -1.11
FN1-221ENST00000480737 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
FN1-221ENST00000480737 USP46P62068 366 aa8.09□□□□□ -1.11
FN1-221ENST00000480737 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
FN1-221ENST00000480737 FAM160A2Q8N612 972 aaPredicted RBP8.09□□□□□ -1.11
FN1-221ENST00000480737 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
FN1-221ENST00000480737 KDM4AO75164 1064 aa8.08□□□□□ -1.12
FN1-221ENST00000480737 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
FN1-221ENST00000480737 SLC19A1P41440 591 aa8.08□□□□□ -1.12
FN1-221ENST00000480737 PLA2G2CQ5R387 149 aa8.08□□□□□ -1.12
FN1-221ENST00000480737 SPRYD7Q5W111 196 aa8.08□□□□□ -1.12
FN1-221ENST00000480737 TRIM67Q6ZTA4 783 aa8.08□□□□□ -1.12
FN1-221ENST00000480737 REPIN1Q9BWE0 567 aaKnown RBP8.08□□□□□ -1.12
FN1-221ENST00000480737 LCE2BO14633 110 aa8.07□□□□□ -1.12
FN1-221ENST00000480737 HOXA2O43364 376 aa8.07□□□□□ -1.12
FN1-221ENST00000480737 LIAT1Q6ZQX7 453 aa8.07□□□□□ -1.12
FN1-221ENST00000480737 GFRA3O60609 400 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 PRR20EP86478 221 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 PRR20CP86479 221 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 PRR20DP86480 221 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 PRR20BP86481 221 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 PRR20AP86496 221 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 RNF19BQ6ZMZ0 732 aa8.06□□□□□ -1.12
FN1-221ENST00000480737 ZNF598Q86UK7 904 aaKnown RBP8.06□□□□□ -1.12
FN1-221ENST00000480737 Q3C1V9 767 aa8.05□□□□□ -1.12
FN1-221ENST00000480737 MMP16P51512 607 aa8.04□□□□□ -1.12
FN1-221ENST00000480737 RPIAP49247 311 aa8.03□□□□□ -1.12
FN1-221ENST00000480737 Q6ZNB5 142 aa8.03□□□□□ -1.12
FN1-221ENST00000480737 PRDM9Q9NQV7 894 aa8.03□□□□□ -1.12
FN1-221ENST00000480737 KRI1Q8N9T8 703 aaKnown RBP8.02□□□□□ -1.13
FN1-221ENST00000480737 PDZRN3Q9UPQ7 1066 aa8.02□□□□□ -1.13
FN1-221ENST00000480737 FCF1Q9Y324 198 aaKnown RBP8.02□□□□□ -1.13
FN1-221ENST00000480737 GDF9O60383 454 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms