RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 SLC26A8Q96RN1 970 aa10.25□□□□□ -0.77
FN1-220ENST00000480024 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
FN1-220ENST00000480024 ZFYVE9O95405 1425 aa10.24□□□□□ -0.77
FN1-220ENST00000480024 RIMS2Q9UQ26 1411 aa10.24□□□□□ -0.77
FN1-220ENST00000480024 BCANQ96GW7 911 aa10.24□□□□□ -0.77
FN1-220ENST00000480024 NKTRP30414 1462 aaKnown RBP10.23□□□□□ -0.77
FN1-220ENST00000480024 SOCS7O14512 581 aa10.23□□□□□ -0.77
FN1-220ENST00000480024 PPP1R15AO75807 674 aaPredicted RBP10.23□□□□□ -0.77
FN1-220ENST00000480024 TMEM94Q12767 1356 aa10.23□□□□□ -0.77
FN1-220ENST00000480024 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
FN1-220ENST00000480024 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
FN1-220ENST00000480024 NUP155O75694 1391 aa10.22□□□□□ -0.77
FN1-220ENST00000480024 PLEKHG1Q9ULL1 1385 aa10.22□□□□□ -0.77
FN1-220ENST00000480024 SPHKAPQ2M3C7 1700 aa10.21□□□□□ -0.77
FN1-220ENST00000480024 KCNA6P17658 529 aa10.21□□□□□ -0.77
FN1-220ENST00000480024 ROBO1Q9Y6N7 1651 aa10.21□□□□□ -0.78
FN1-220ENST00000480024 CHD2O14647 1828 aaKnown RBP10.21□□□□□ -0.78
FN1-220ENST00000480024 PROSER2Q86WR7 435 aaPredicted RBP10.2□□□□□ -0.78
FN1-220ENST00000480024 DIP2AQ14689 1571 aa10.19□□□□□ -0.78
FN1-220ENST00000480024 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
FN1-220ENST00000480024 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
FN1-220ENST00000480024 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
FN1-220ENST00000480024 ADAMTS13Q76LX8 1427 aa10.17□□□□□ -0.78
FN1-220ENST00000480024 MSH6P52701 1360 aa10.17□□□□□ -0.78
FN1-220ENST00000480024 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
FN1-220ENST00000480024 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.17□□□□□ -0.78
FN1-220ENST00000480024 FAM135BQ49AJ0 1406 aa10.16□□□□□ -0.78
FN1-220ENST00000480024 CLTCL1P53675 1640 aa10.16□□□□□ -0.78
FN1-220ENST00000480024 TRPM2O94759 1503 aa10.16□□□□□ -0.78
FN1-220ENST00000480024 NAIPQ13075 1403 aa10.16□□□□□ -0.78
FN1-220ENST00000480024 NRXN3Q9Y4C0 1643 aa10.15□□□□□ -0.78
FN1-220ENST00000480024 PHLPP1O60346 1717 aa10.15□□□□□ -0.78
FN1-220ENST00000480024 TBX22Q9Y458 520 aa10.14□□□□□ -0.79
FN1-220ENST00000480024 KIF1BO60333 1816 aa10.14□□□□□ -0.79
FN1-220ENST00000480024 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
FN1-220ENST00000480024 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
FN1-220ENST00000480024 ZNF326Q5BKZ1 582 aaKnown RBP10.13□□□□□ -0.79
FN1-220ENST00000480024 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
FN1-220ENST00000480024 XRN1Q8IZH2 1706 aaKnown RBP10.13□□□□□ -0.79
FN1-220ENST00000480024 PIK3R4Q99570 1358 aa10.13□□□□□ -0.79
FN1-220ENST00000480024 NEXMIFQ5QGS0 1516 aa10.12□□□□□ -0.79
FN1-220ENST00000480024 HFM1A2PYH4 1435 aa10.12□□□□□ -0.79
FN1-220ENST00000480024 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
FN1-220ENST00000480024 SLAIN2Q9P270 581 aa10.11□□□□□ -0.79
FN1-220ENST00000480024 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
FN1-220ENST00000480024 NCOA3Q9Y6Q9 1424 aa10.1□□□□□ -0.79
FN1-220ENST00000480024 TRIM52Q96A61 297 aa10.09□□□□□ -0.79
FN1-220ENST00000480024 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
FN1-220ENST00000480024 RGS17Q9UGC6 210 aaPredicted RBP10.08□□□□□ -0.8
FN1-220ENST00000480024 METP08581 1390 aa10.08□□□□□ -0.8
FN1-220ENST00000480024 AHDC1Q5TGY3 1603 aaPredicted RBP10.07□□□□□ -0.8
FN1-220ENST00000480024 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
FN1-220ENST00000480024 ATF3P18847 181 aa10.07□□□□□ -0.8
FN1-220ENST00000480024 CADPS2Q86UW7 1296 aa10.07□□□□□ -0.8
FN1-220ENST00000480024 SETD1AO15047 1707 aaKnown RBP10.07□□□□□ -0.8
FN1-220ENST00000480024 DCCP43146 1447 aa10.07□□□□□ -0.8
FN1-220ENST00000480024 PPLO60437 1756 aa10.06□□□□□ -0.8
FN1-220ENST00000480024 JCADQ9P266 1359 aa10.06□□□□□ -0.8
FN1-220ENST00000480024 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
FN1-220ENST00000480024 C19orf44Q9H6X5 657 aa10.06□□□□□ -0.8
FN1-220ENST00000480024 ASXL1Q8IXJ9 1541 aa10.05□□□□□ -0.8
FN1-220ENST00000480024 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
FN1-220ENST00000480024 LRP6O75581 1613 aa10.04□□□□□ -0.8
FN1-220ENST00000480024 MST1RQ04912 1400 aa10.04□□□□□ -0.8
FN1-220ENST00000480024 ADGRL3Q9HAR2 1447 aa10.04□□□□□ -0.8
FN1-220ENST00000480024 NHSL1Q5SYE7 1610 aa10.04□□□□□ -0.8
FN1-220ENST00000480024 FOXD1Q16676 465 aa10.03□□□□□ -0.8
FN1-220ENST00000480024 POTEAQ6S8J7 498 aa10.03□□□□□ -0.8
FN1-220ENST00000480024 BRINP3Q76B58 766 aa10.03□□□□□ -0.8
FN1-220ENST00000480024 PTCH1Q13635 1447 aa10.02□□□□□ -0.81
FN1-220ENST00000480024 CCDC144AA2RUR9 1427 aa10.01□□□□□ -0.81
FN1-220ENST00000480024 MEX3CQ5U5Q3 659 aaKnown RBP10.01□□□□□ -0.81
FN1-220ENST00000480024 IFT172Q9UG01 1749 aa10.01□□□□□ -0.81
FN1-220ENST00000480024 SPATA31A6Q5VVP1 1343 aa10.01□□□□□ -0.81
FN1-220ENST00000480024 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
FN1-220ENST00000480024 RPGRIP1LQ68CZ1 1315 aa10□□□□□ -0.81
FN1-220ENST00000480024 ROBO2Q9HCK4 1378 aa10□□□□□ -0.81
FN1-220ENST00000480024 PRAG1Q86YV5 1406 aa9.99□□□□□ -0.81
FN1-220ENST00000480024 C1orf167Q5SNV9 1468 aa9.98□□□□□ -0.81
FN1-220ENST00000480024 DDX17Q92841 729 aaKnown RBP9.98□□□□□ -0.81
FN1-220ENST00000480024 SPATA31E1Q6ZUB1 1445 aa9.98□□□□□ -0.81
FN1-220ENST00000480024 SETD5Q9C0A6 1442 aa9.98□□□□□ -0.81
FN1-220ENST00000480024 NUTM2BA6NNL0 878 aaPredicted RBP9.97□□□□□ -0.81
FN1-220ENST00000480024 NUTM2EB1AL46 878 aaPredicted RBP9.97□□□□□ -0.81
FN1-220ENST00000480024 NUTM2AQ8IVF1 878 aaPredicted RBP9.97□□□□□ -0.81
FN1-220ENST00000480024 MPHOSPH9Q99550 1183 aa9.97□□□□□ -0.81
FN1-220ENST00000480024 CDC42BPGQ6DT37 1551 aa9.97□□□□□ -0.81
FN1-220ENST00000480024 RGL3Q3MIN7 710 aa9.96□□□□□ -0.82
FN1-220ENST00000480024 ADGRF5Q8IZF2 1346 aa9.96□□□□□ -0.82
FN1-220ENST00000480024 PNPLA6Q8IY17 1366 aa9.96□□□□□ -0.82
FN1-220ENST00000480024 LAMC1P11047 1609 aa9.96□□□□□ -0.82
FN1-220ENST00000480024 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.82
FN1-220ENST00000480024 PIK3C2GO75747 1445 aa9.94□□□□□ -0.82
FN1-220ENST00000480024 ANKRD30BQ9BXX2 1392 aa9.94□□□□□ -0.82
FN1-220ENST00000480024 ZNF772Q68DY9 489 aaPredicted RBP9.94□□□□□ -0.82
FN1-220ENST00000480024 TECPR2O15040 1411 aa9.93□□□□□ -0.82
FN1-220ENST00000480024 LRRC59Q96AG4 307 aaKnown RBP9.93□□□□□ -0.82
FN1-220ENST00000480024 ORAI2Q96SN7 254 aa9.93□□□□□ -0.82
FN1-220ENST00000480024 RAB3GAP2Q9H2M9 1393 aa9.92□□□□□ -0.82
FN1-220ENST00000480024 AFF2P51816 1311 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms