RNA–Protein interactions for RNA: ENST00000479499.1

LAMC1-204, Transcript of laminin subunit gamma 1, humanhuman

TSL 3

Gene LAMC1, Length 700 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1-204ENST00000479499 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
LAMC1-204ENST00000479499 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
LAMC1-204ENST00000479499 PROSER2Q86WR7 435 aaPredicted RBP18.51■□□□□ 0.55
LAMC1-204ENST00000479499 RPRD2Q5VT52 1461 aaKnown RBP18.51■□□□□ 0.55
LAMC1-204ENST00000479499 NWD1Q149M9 1564 aa18.5■□□□□ 0.55
LAMC1-204ENST00000479499 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
LAMC1-204ENST00000479499 TMEM131LA2VDJ0 1609 aa18.46■□□□□ 0.55
LAMC1-204ENST00000479499 PLEKHG1Q9ULL1 1385 aa18.46■□□□□ 0.55
LAMC1-204ENST00000479499 ROBO1Q9Y6N7 1651 aa18.46■□□□□ 0.55
LAMC1-204ENST00000479499 RIMS2Q9UQ26 1411 aa18.46■□□□□ 0.55
LAMC1-204ENST00000479499 MYO5BQ9ULV0 1848 aa18.46■□□□□ 0.55
LAMC1-204ENST00000479499 UNC13BO14795 1591 aa18.45■□□□□ 0.54
LAMC1-204ENST00000479499 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
LAMC1-204ENST00000479499 BCANQ96GW7 911 aa18.43■□□□□ 0.54
LAMC1-204ENST00000479499 MSH6P52701 1360 aa18.41■□□□□ 0.54
LAMC1-204ENST00000479499 E9PCH4 1651 aa18.41■□□□□ 0.54
LAMC1-204ENST00000479499 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
LAMC1-204ENST00000479499 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
LAMC1-204ENST00000479499 SLAIN2Q9P270 581 aa18.4■□□□□ 0.54
LAMC1-204ENST00000479499 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
LAMC1-204ENST00000479499 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
LAMC1-204ENST00000479499 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
LAMC1-204ENST00000479499 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
LAMC1-204ENST00000479499 NUTM2DQ5VT03 806 aaPredicted RBP18.38■□□□□ 0.53
LAMC1-204ENST00000479499 IQGAP3Q86VI3 1631 aa18.38■□□□□ 0.53
LAMC1-204ENST00000479499 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
LAMC1-204ENST00000479499 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
LAMC1-204ENST00000479499 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
LAMC1-204ENST00000479499 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
LAMC1-204ENST00000479499 NUP155O75694 1391 aa18.34■□□□□ 0.53
LAMC1-204ENST00000479499 SETD1AO15047 1707 aaKnown RBP18.34■□□□□ 0.53
LAMC1-204ENST00000479499 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
LAMC1-204ENST00000479499 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
LAMC1-204ENST00000479499 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
LAMC1-204ENST00000479499 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
LAMC1-204ENST00000479499 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
LAMC1-204ENST00000479499 ITGAEP38570 1179 aa18.31■□□□□ 0.52
LAMC1-204ENST00000479499 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
LAMC1-204ENST00000479499 JCADQ9P266 1359 aa18.3■□□□□ 0.52
LAMC1-204ENST00000479499 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
LAMC1-204ENST00000479499 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
LAMC1-204ENST00000479499 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.28■□□□□ 0.52
LAMC1-204ENST00000479499 C14orf37Q86TY3 774 aa18.27■□□□□ 0.52
LAMC1-204ENST00000479499 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
LAMC1-204ENST00000479499 LRP6O75581 1613 aa18.27■□□□□ 0.51
LAMC1-204ENST00000479499 TRPM2O94759 1503 aa18.26■□□□□ 0.51
LAMC1-204ENST00000479499 NRXN3Q9Y4C0 1643 aa18.26■□□□□ 0.51
LAMC1-204ENST00000479499 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
LAMC1-204ENST00000479499 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
LAMC1-204ENST00000479499 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
LAMC1-204ENST00000479499 ATF3P18847 181 aa18.23■□□□□ 0.51
LAMC1-204ENST00000479499 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
LAMC1-204ENST00000479499 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
LAMC1-204ENST00000479499 SPHKAPQ2M3C7 1700 aa18.21■□□□□ 0.51
LAMC1-204ENST00000479499 METP08581 1390 aa18.21■□□□□ 0.51
LAMC1-204ENST00000479499 SPATA31A6Q5VVP1 1343 aa18.2■□□□□ 0.5
LAMC1-204ENST00000479499 DCCP43146 1447 aa18.18■□□□□ 0.5
LAMC1-204ENST00000479499 CLTCL1P53675 1640 aa18.18■□□□□ 0.5
LAMC1-204ENST00000479499 SRCAPQ6ZRS2 3230 aa18.18■□□□□ 0.5
LAMC1-204ENST00000479499 SHPRHQ149N8 1683 aa18.18■□□□□ 0.5
LAMC1-204ENST00000479499 ZNF326Q5BKZ1 582 aaKnown RBP18.17■□□□□ 0.5
LAMC1-204ENST00000479499 NEXMIFQ5QGS0 1516 aa18.17■□□□□ 0.5
LAMC1-204ENST00000479499 MST1RQ04912 1400 aa18.16■□□□□ 0.5
LAMC1-204ENST00000479499 ASXL1Q8IXJ9 1541 aa18.16■□□□□ 0.5
LAMC1-204ENST00000479499 NAIPQ13075 1403 aa18.15■□□□□ 0.5
LAMC1-204ENST00000479499 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
LAMC1-204ENST00000479499 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
LAMC1-204ENST00000479499 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
LAMC1-204ENST00000479499 ADRA2BP18089 450 aa18.12■□□□□ 0.49
LAMC1-204ENST00000479499 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
LAMC1-204ENST00000479499 ZNF772Q68DY9 489 aaPredicted RBP18.11■□□□□ 0.49
LAMC1-204ENST00000479499 DDX17Q92841 729 aaKnown RBP18.11■□□□□ 0.49
LAMC1-204ENST00000479499 NHSL1Q5SYE7 1610 aa18.1■□□□□ 0.49
LAMC1-204ENST00000479499 NUTM2BA6NNL0 878 aaPredicted RBP18.1■□□□□ 0.49
LAMC1-204ENST00000479499 NUTM2EB1AL46 878 aaPredicted RBP18.1■□□□□ 0.49
LAMC1-204ENST00000479499 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
LAMC1-204ENST00000479499 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
LAMC1-204ENST00000479499 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
LAMC1-204ENST00000479499 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
LAMC1-204ENST00000479499 UPF1Q92900 1129 aaKnown RBP eCLIP18.06■□□□□ 0.48
LAMC1-204ENST00000479499 PNPLA6Q8IY17 1366 aa18.05■□□□□ 0.48
LAMC1-204ENST00000479499 AFF2P51816 1311 aa18.05■□□□□ 0.48
LAMC1-204ENST00000479499 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
LAMC1-204ENST00000479499 C1orf167Q5SNV9 1468 aa18.05■□□□□ 0.48
LAMC1-204ENST00000479499 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
LAMC1-204ENST00000479499 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
LAMC1-204ENST00000479499 KIF1BO60333 1816 aa18.05■□□□□ 0.48
LAMC1-204ENST00000479499 RXRBP28702 533 aa18.03■□□□□ 0.48
LAMC1-204ENST00000479499 PRAG1Q86YV5 1406 aa18.03■□□□□ 0.48
LAMC1-204ENST00000479499 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
LAMC1-204ENST00000479499 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
LAMC1-204ENST00000479499 ORAI2Q96SN7 254 aa18.01■□□□□ 0.47
LAMC1-204ENST00000479499 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
LAMC1-204ENST00000479499 LAMC1P11047 1609 aa18■□□□□ 0.47
LAMC1-204ENST00000479499 RPGRIP1LQ68CZ1 1315 aa17.99■□□□□ 0.47
LAMC1-204ENST00000479499 C8orf37Q96NL8 207 aa17.99■□□□□ 0.47
LAMC1-204ENST00000479499 EP400Q96L91 3159 aa17.99■□□□□ 0.47
LAMC1-204ENST00000479499 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
LAMC1-204ENST00000479499 RGS12O14924 1447 aa17.97■□□□□ 0.47
LAMC1-204ENST00000479499 PPLO60437 1756 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms