RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
EWSR1-216ENST00000479135 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
EWSR1-216ENST00000479135 CBX1P83916 185 aa13.34□□□□□ -0.27
EWSR1-216ENST00000479135 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
EWSR1-216ENST00000479135 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.27
EWSR1-216ENST00000479135 RBM28Q9NW13 759 aaKnown RBP13.33□□□□□ -0.28
EWSR1-216ENST00000479135 CSB-PGBD3P0DP91 1061 aa13.33□□□□□ -0.28
EWSR1-216ENST00000479135 ABCC9O60706 1549 aa13.32□□□□□ -0.28
EWSR1-216ENST00000479135 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
EWSR1-216ENST00000479135 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
EWSR1-216ENST00000479135 ZWINTO95229 277 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 EZRP15311 586 aaKnown RBP13.31□□□□□ -0.28
EWSR1-216ENST00000479135 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 MS4A1P11836 297 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 GTF2E1P29083 439 aaPredicted RBP13.31□□□□□ -0.28
EWSR1-216ENST00000479135 CCDC113Q9H0I3 377 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 GSE1Q14687 1217 aa13.31□□□□□ -0.28
EWSR1-216ENST00000479135 CCDC160A6NGH7 325 aa13.3□□□□□ -0.28
EWSR1-216ENST00000479135 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
EWSR1-216ENST00000479135 UBE4AQ14139 1066 aa13.3□□□□□ -0.28
EWSR1-216ENST00000479135 SPC24Q8NBT2 197 aa13.3□□□□□ -0.28
EWSR1-216ENST00000479135 SMC1AQ14683 1233 aaKnown RBP13.3□□□□□ -0.28
EWSR1-216ENST00000479135 SPATA24Q86W54 205 aa13.3□□□□□ -0.28
EWSR1-216ENST00000479135 FAM184BQ9ULE4 1060 aa13.3□□□□□ -0.28
EWSR1-216ENST00000479135 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
EWSR1-216ENST00000479135 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
EWSR1-216ENST00000479135 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
EWSR1-216ENST00000479135 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
EWSR1-216ENST00000479135 TRIM29Q14134 588 aa13.29□□□□□ -0.28
EWSR1-216ENST00000479135 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
EWSR1-216ENST00000479135 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
EWSR1-216ENST00000479135 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
EWSR1-216ENST00000479135 ST18O60284 1047 aa13.28□□□□□ -0.28
EWSR1-216ENST00000479135 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
EWSR1-216ENST00000479135 BMS1Q14692 1282 aaKnown RBP13.28□□□□□ -0.28
EWSR1-216ENST00000479135 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
EWSR1-216ENST00000479135 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
EWSR1-216ENST00000479135 GBP2P32456 591 aaPredicted RBP13.28□□□□□ -0.28
EWSR1-216ENST00000479135 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
EWSR1-216ENST00000479135 IPO9Q96P70 1041 aaKnown RBP13.28□□□□□ -0.28
EWSR1-216ENST00000479135 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.28
EWSR1-216ENST00000479135 APBB1IPQ7Z5R6 666 aaPredicted RBP13.27□□□□□ -0.29
EWSR1-216ENST00000479135 NEBLO76041 1014 aa13.27□□□□□ -0.29
EWSR1-216ENST00000479135 SMC2O95347 1197 aa13.27□□□□□ -0.29
EWSR1-216ENST00000479135 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
EWSR1-216ENST00000479135 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
EWSR1-216ENST00000479135 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
EWSR1-216ENST00000479135 MAP2K1Q02750 393 aaPredicted RBP13.26□□□□□ -0.29
EWSR1-216ENST00000479135 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
EWSR1-216ENST00000479135 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
EWSR1-216ENST00000479135 NFXL1Q6ZNB6 911 aa13.26□□□□□ -0.29
EWSR1-216ENST00000479135 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
EWSR1-216ENST00000479135 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
EWSR1-216ENST00000479135 ZBTB9Q96C00 473 aa13.25□□□□□ -0.29
EWSR1-216ENST00000479135 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
EWSR1-216ENST00000479135 ARID4AP29374 1257 aaPredicted RBP13.24□□□□□ -0.29
EWSR1-216ENST00000479135 RNF187Q5TA31 235 aaPredicted RBP13.24□□□□□ -0.29
EWSR1-216ENST00000479135 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
EWSR1-216ENST00000479135 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
EWSR1-216ENST00000479135 ANO2Q9NQ90 1003 aa13.24□□□□□ -0.29
EWSR1-216ENST00000479135 SYCP1Q15431 976 aa13.24□□□□□ -0.29
EWSR1-216ENST00000479135 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
EWSR1-216ENST00000479135 CARD11Q9BXL7 1154 aa13.24□□□□□ -0.29
EWSR1-216ENST00000479135 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
EWSR1-216ENST00000479135 NUCB2P80303 420 aa13.23□□□□□ -0.29
EWSR1-216ENST00000479135 ERLIN2O94905 339 aa13.23□□□□□ -0.29
EWSR1-216ENST00000479135 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
EWSR1-216ENST00000479135 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
EWSR1-216ENST00000479135 SEPT6Q14141 434 aa13.22□□□□□ -0.29
EWSR1-216ENST00000479135 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
EWSR1-216ENST00000479135 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
EWSR1-216ENST00000479135 CCDC181Q5TID7 509 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 WDR78Q5VTH9 848 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 PDCL3Q9H2J4 239 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 CLIP1P30622 1438 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
EWSR1-216ENST00000479135 USP8P40818 1118 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.29
EWSR1-216ENST00000479135 WWC2Q6AWC2 1192 aa13.21□□□□□ -0.3
EWSR1-216ENST00000479135 CFAP44Q96MT7 982 aa13.21□□□□□ -0.3
EWSR1-216ENST00000479135 GOLGA3Q08378 1498 aa13.21□□□□□ -0.3
EWSR1-216ENST00000479135 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
EWSR1-216ENST00000479135 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
EWSR1-216ENST00000479135 ATP2C2O75185 946 aa13.2□□□□□ -0.3
EWSR1-216ENST00000479135 TMX1Q9H3N1 280 aa13.2□□□□□ -0.3
EWSR1-216ENST00000479135 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
EWSR1-216ENST00000479135 SRPK2P78362 688 aaKnown RBP13.2□□□□□ -0.3
EWSR1-216ENST00000479135 STAMBPO95630 424 aa13.19□□□□□ -0.3
EWSR1-216ENST00000479135 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
EWSR1-216ENST00000479135 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
EWSR1-216ENST00000479135 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
EWSR1-216ENST00000479135 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
EWSR1-216ENST00000479135 GOPCQ9HD26 462 aa13.18□□□□□ -0.3
EWSR1-216ENST00000479135 CPLX1O14810 134 aa13.18□□□□□ -0.3
EWSR1-216ENST00000479135 DAAM2Q86T65 1068 aa13.18□□□□□ -0.3
EWSR1-216ENST00000479135 CGNQ9P2M7 1197 aaKnown RBP13.18□□□□□ -0.3
EWSR1-216ENST00000479135 CEBPZQ03701 1054 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms