RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.26■□□□□ 0.675e-15■■□□□ 12.8
AGRN-207ENST00000478677 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
AGRN-207ENST00000478677 PHLPP1O60346 1717 aa19.25■□□□□ 0.67
AGRN-207ENST00000478677 DIP2AQ14689 1571 aa19.23■□□□□ 0.67
AGRN-207ENST00000478677 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
AGRN-207ENST00000478677 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
AGRN-207ENST00000478677 UNC13BO14795 1591 aa19.23■□□□□ 0.67
AGRN-207ENST00000478677 PLEKHG1Q9ULL1 1385 aa19.22■□□□□ 0.67
AGRN-207ENST00000478677 CHIC2Q9UKJ5 165 aa19.21■□□□□ 0.67
AGRN-207ENST00000478677 E9PCH4 1651 aa19.2■□□□□ 0.66
AGRN-207ENST00000478677 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
AGRN-207ENST00000478677 AHDC1Q5TGY3 1603 aaPredicted RBP19.2■□□□□ 0.66
AGRN-207ENST00000478677 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
AGRN-207ENST00000478677 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.19■□□□□ 0.66
AGRN-207ENST00000478677 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
AGRN-207ENST00000478677 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
AGRN-207ENST00000478677 PROSER2Q86WR7 435 aaPredicted RBP19.18■□□□□ 0.66
AGRN-207ENST00000478677 KANK1Q14678 1352 aa19.18■□□□□ 0.66
AGRN-207ENST00000478677 SLAIN2Q9P270 581 aa19.16■□□□□ 0.66
AGRN-207ENST00000478677 SHPRHQ149N8 1683 aa19.16■□□□□ 0.66
AGRN-207ENST00000478677 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
AGRN-207ENST00000478677 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
AGRN-207ENST00000478677 JCADQ9P266 1359 aa19.15■□□□□ 0.66
AGRN-207ENST00000478677 XRN1Q8IZH2 1706 aaKnown RBP19.14■□□□□ 0.65
AGRN-207ENST00000478677 SRCAPQ6ZRS2 3230 aa19.13■□□□□ 0.65
AGRN-207ENST00000478677 MSH6P52701 1360 aa19.13■□□□□ 0.65
AGRN-207ENST00000478677 IQGAP3Q86VI3 1631 aa19.12■□□□□ 0.65
AGRN-207ENST00000478677 NCOA3Q9Y6Q9 1424 aa19.12■□□□□ 0.65
AGRN-207ENST00000478677 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
AGRN-207ENST00000478677 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
AGRN-207ENST00000478677 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
AGRN-207ENST00000478677 SETBP1Q9Y6X0 1596 aa19.05■□□□□ 0.64
AGRN-207ENST00000478677 TRPM2O94759 1503 aa19.05■□□□□ 0.64
AGRN-207ENST00000478677 ASXL1Q8IXJ9 1541 aa19.04■□□□□ 0.64
AGRN-207ENST00000478677 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
AGRN-207ENST00000478677 MST1RQ04912 1400 aa19.03■□□□□ 0.64
AGRN-207ENST00000478677 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
AGRN-207ENST00000478677 UPF1Q92900 1129 aaKnown RBP eCLIP19.03■□□□□ 0.64
AGRN-207ENST00000478677 BRINP3Q76B58 766 aa19.02■□□□□ 0.64
AGRN-207ENST00000478677 SPATA31A6Q5VVP1 1343 aa19.01■□□□□ 0.63
AGRN-207ENST00000478677 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
AGRN-207ENST00000478677 LAMC1P11047 1609 aa19■□□□□ 0.63
AGRN-207ENST00000478677 DCCP43146 1447 aa19■□□□□ 0.63
AGRN-207ENST00000478677 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
AGRN-207ENST00000478677 ROCK1Q13464 1354 aa18.99■□□□□ 0.63
AGRN-207ENST00000478677 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
AGRN-207ENST00000478677 METP08581 1390 aa18.98■□□□□ 0.63
AGRN-207ENST00000478677 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
AGRN-207ENST00000478677 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
AGRN-207ENST00000478677 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
AGRN-207ENST00000478677 RGS12O14924 1447 aa18.95■□□□□ 0.62
AGRN-207ENST00000478677 AMOTL2Q9Y2J4 779 aa18.95■□□□□ 0.62
AGRN-207ENST00000478677 CLTCL1P53675 1640 aa18.94■□□□□ 0.62
AGRN-207ENST00000478677 EP400Q96L91 3159 aa18.94■□□□□ 0.62
AGRN-207ENST00000478677 FAM50AQ14320 339 aaKnown RBP18.93■□□□□ 0.62
AGRN-207ENST00000478677 CADPS2Q86UW7 1296 aa18.93■□□□□ 0.62
AGRN-207ENST00000478677 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
AGRN-207ENST00000478677 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
AGRN-207ENST00000478677 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
AGRN-207ENST00000478677 PNPLA6Q8IY17 1366 aa18.91■□□□□ 0.62
AGRN-207ENST00000478677 ADGRL3Q9HAR2 1447 aa18.91■□□□□ 0.62
AGRN-207ENST00000478677 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
AGRN-207ENST00000478677 BCANQ96GW7 911 aa18.9■□□□□ 0.62
AGRN-207ENST00000478677 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
AGRN-207ENST00000478677 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
AGRN-207ENST00000478677 NUP155O75694 1391 aa18.87■□□□□ 0.61
AGRN-207ENST00000478677 AFF2P51816 1311 aa18.87■□□□□ 0.61
AGRN-207ENST00000478677 CHGAP10645 457 aaKnown RBP18.86■□□□□ 0.61
AGRN-207ENST00000478677 ATF3P18847 181 aa18.85■□□□□ 0.61
AGRN-207ENST00000478677 C1orf167Q5SNV9 1468 aa18.84■□□□□ 0.61
AGRN-207ENST00000478677 APLP2Q06481 763 aa18.84■□□□□ 0.61
AGRN-207ENST00000478677 COL22A1Q8NFW1 1626 aaPredicted RBP18.83■□□□□ 0.61
AGRN-207ENST00000478677 HDGFP51858 240 aaKnown RBP18.83■□□□□ 0.6
AGRN-207ENST00000478677 ROBO2Q9HCK4 1378 aa18.82■□□□□ 0.6
AGRN-207ENST00000478677 RXRBP28702 533 aa18.82■□□□□ 0.6
AGRN-207ENST00000478677 NUTM2BA6NNL0 878 aaPredicted RBP18.81■□□□□ 0.6
AGRN-207ENST00000478677 NUTM2EB1AL46 878 aaPredicted RBP18.81■□□□□ 0.6
AGRN-207ENST00000478677 NUTM2AQ8IVF1 878 aaPredicted RBP18.81■□□□□ 0.6
AGRN-207ENST00000478677 PTCH1Q13635 1447 aa18.81■□□□□ 0.6
AGRN-207ENST00000478677 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
AGRN-207ENST00000478677 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
AGRN-207ENST00000478677 SOS2Q07890 1332 aaPredicted RBP18.78■□□□□ 0.6
AGRN-207ENST00000478677 MYOM2P54296 1465 aa18.77■□□□□ 0.6
AGRN-207ENST00000478677 ORAI2Q96SN7 254 aa18.75■□□□□ 0.59
AGRN-207ENST00000478677 PXDNQ92626 1479 aa18.75■□□□□ 0.59
AGRN-207ENST00000478677 ATRNO75882 1429 aa18.74■□□□□ 0.59
AGRN-207ENST00000478677 NAIPQ13075 1403 aa18.74■□□□□ 0.59
AGRN-207ENST00000478677 PPLO60437 1756 aa18.74■□□□□ 0.59
AGRN-207ENST00000478677 LRRC59Q96AG4 307 aaKnown RBP18.74■□□□□ 0.59
AGRN-207ENST00000478677 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
AGRN-207ENST00000478677 C8orf37Q96NL8 207 aa18.73■□□□□ 0.59
AGRN-207ENST00000478677 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
AGRN-207ENST00000478677 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
AGRN-207ENST00000478677 KIF1BO60333 1816 aa18.72■□□□□ 0.59
AGRN-207ENST00000478677 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
AGRN-207ENST00000478677 FNBP4Q8N3X1 1017 aaPredicted RBP18.7■□□□□ 0.58
AGRN-207ENST00000478677 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
AGRN-207ENST00000478677 RRBP1Q9P2E9 1410 aaKnown RBP18.69■□□□□ 0.58
AGRN-207ENST00000478677 GLI3P10071 1580 aa18.68■□□□□ 0.58
AGRN-207ENST00000478677 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms