RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
CDC42BPA-212ENST00000478573 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
CDC42BPA-212ENST00000478573 NKX2-3Q8TAU0 364 aa10.23□□□□□ -0.77
CDC42BPA-212ENST00000478573 PPP1R18Q6NYC8 613 aa10.22□□□□□ -0.77
CDC42BPA-212ENST00000478573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.21□□□□□ -0.77
CDC42BPA-212ENST00000478573 OATP04181 439 aa10.21□□□□□ -0.77
CDC42BPA-212ENST00000478573 CFHP08603 1231 aa10.21□□□□□ -0.77
CDC42BPA-212ENST00000478573 FECHP22830 423 aa10.21□□□□□ -0.77
CDC42BPA-212ENST00000478573 PXYLP1Q8TE99 480 aa10.21□□□□□ -0.77
CDC42BPA-212ENST00000478573 GNPATO15228 680 aa10.2□□□□□ -0.78
CDC42BPA-212ENST00000478573 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
CDC42BPA-212ENST00000478573 BLOC1S3Q6QNY0 202 aa10.2□□□□□ -0.78
CDC42BPA-212ENST00000478573 GPIHBP1Q8IV16 184 aa10.19□□□□□ -0.78
CDC42BPA-212ENST00000478573 ZPR1O75312 459 aa10.18□□□□□ -0.78
CDC42BPA-212ENST00000478573 METTL3Q86U44 580 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-212ENST00000478573 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
CDC42BPA-212ENST00000478573 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-212ENST00000478573 GPR37O15354 613 aa10.17□□□□□ -0.78
CDC42BPA-212ENST00000478573 VSIG10Q8N0Z9 540 aa10.17□□□□□ -0.78
CDC42BPA-212ENST00000478573 SLC10A3P09131 477 aa10.16□□□□□ -0.78
CDC42BPA-212ENST00000478573 TLL1O43897 1013 aa10.15□□□□□ -0.78
CDC42BPA-212ENST00000478573 GGCXP38435 758 aa10.15□□□□□ -0.78
CDC42BPA-212ENST00000478573 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
CDC42BPA-212ENST00000478573 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
CDC42BPA-212ENST00000478573 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
CDC42BPA-212ENST00000478573 TULP1O00294 542 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPA-212ENST00000478573 RSPH4AQ5TD94 716 aa10.13□□□□□ -0.79
CDC42BPA-212ENST00000478573 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
CDC42BPA-212ENST00000478573 Q6ZNB5 142 aa10.12□□□□□ -0.79
CDC42BPA-212ENST00000478573 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
CDC42BPA-212ENST00000478573 GFRA3O60609 400 aa10.09□□□□□ -0.79
CDC42BPA-212ENST00000478573 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-212ENST00000478573 NR1I2O75469 434 aa10.08□□□□□ -0.8
CDC42BPA-212ENST00000478573 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-212ENST00000478573 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-212ENST00000478573 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
CDC42BPA-212ENST00000478573 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
CDC42BPA-212ENST00000478573 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
CDC42BPA-212ENST00000478573 S1PR4O95977 384 aa10.06□□□□□ -0.8
CDC42BPA-212ENST00000478573 PPEF1O14829 653 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-212ENST00000478573 LAPTM4AQ15012 233 aa10.04□□□□□ -0.8
CDC42BPA-212ENST00000478573 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
CDC42BPA-212ENST00000478573 ADH1BP00325 375 aa10.03□□□□□ -0.8
CDC42BPA-212ENST00000478573 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
CDC42BPA-212ENST00000478573 FUT2Q10981 343 aa10.02□□□□□ -0.81
CDC42BPA-212ENST00000478573 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
CDC42BPA-212ENST00000478573 SLC19A1P41440 591 aa10.01□□□□□ -0.81
CDC42BPA-212ENST00000478573 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
CDC42BPA-212ENST00000478573 SPSB2Q99619 263 aa10□□□□□ -0.81
CDC42BPA-212ENST00000478573 PDZRN3Q9UPQ7 1066 aa10□□□□□ -0.81
CDC42BPA-212ENST00000478573 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
CDC42BPA-212ENST00000478573 NRG2O14511 850 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-212ENST00000478573 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
CDC42BPA-212ENST00000478573 GCGRP47871 477 aa9.98□□□□□ -0.81
CDC42BPA-212ENST00000478573 MORN1Q5T089 497 aa9.97□□□□□ -0.81
CDC42BPA-212ENST00000478573 IRF6O14896 467 aa9.96□□□□□ -0.82
CDC42BPA-212ENST00000478573 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-212ENST00000478573 EMID1Q96A84 441 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-212ENST00000478573 CCDC102AQ96A19 550 aa9.95□□□□□ -0.82
CDC42BPA-212ENST00000478573 SLC27A5Q9Y2P5 690 aa9.95□□□□□ -0.82
CDC42BPA-212ENST00000478573 MINK1Q8N4C8 1332 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-212ENST00000478573 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
CDC42BPA-212ENST00000478573 SPRYD7Q5W111 196 aa9.93□□□□□ -0.82
CDC42BPA-212ENST00000478573 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
CDC42BPA-212ENST00000478573 LIAT1Q6ZQX7 453 aa9.93□□□□□ -0.82
CDC42BPA-212ENST00000478573 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
CDC42BPA-212ENST00000478573 PLA2G2CQ5R387 149 aa9.92□□□□□ -0.82
CDC42BPA-212ENST00000478573 ZNF697Q5TEC3 545 aa9.92□□□□□ -0.82
CDC42BPA-212ENST00000478573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDC42BPA-212ENST00000478573 LCE2BO14633 110 aa9.91□□□□□ -0.82
CDC42BPA-212ENST00000478573 CD46P15529 392 aa9.91□□□□□ -0.82
CDC42BPA-212ENST00000478573 ZNF598Q86UK7 904 aaKnown RBP9.91□□□□□ -0.82
CDC42BPA-212ENST00000478573 LMOD2Q6P5Q4 547 aa9.9□□□□□ -0.82
CDC42BPA-212ENST00000478573 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-212ENST00000478573 THAP11Q96EK4 314 aa9.9□□□□□ -0.82
CDC42BPA-212ENST00000478573 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
CDC42BPA-212ENST00000478573 RNF19BQ6ZMZ0 732 aa9.89□□□□□ -0.83
CDC42BPA-212ENST00000478573 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
CDC42BPA-212ENST00000478573 FCF1Q9Y324 198 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-212ENST00000478573 TNFRSF10AO00220 468 aa9.88□□□□□ -0.83
CDC42BPA-212ENST00000478573 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-212ENST00000478573 KDM4AO75164 1064 aa9.87□□□□□ -0.83
CDC42BPA-212ENST00000478573 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
CDC42BPA-212ENST00000478573 BRICD5Q6PL45 260 aa9.86□□□□□ -0.83
CDC42BPA-212ENST00000478573 CLCN1P35523 988 aa9.85□□□□□ -0.83
CDC42BPA-212ENST00000478573 FOXC1Q12948 553 aa9.85□□□□□ -0.83
CDC42BPA-212ENST00000478573 Q3C1V9 767 aa9.85□□□□□ -0.83
CDC42BPA-212ENST00000478573 HLA-CQ95604 372 aa9.85□□□□□ -0.83
CDC42BPA-212ENST00000478573 PKDCCQ504Y2 493 aa9.84□□□□□ -0.83
CDC42BPA-212ENST00000478573 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-212ENST00000478573 USP46P62068 366 aa9.82□□□□□ -0.84
CDC42BPA-212ENST00000478573 MSS51Q4VC12 460 aa9.82□□□□□ -0.84
CDC42BPA-212ENST00000478573 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-212ENST00000478573 FAM187AA6NFU0 413 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 ZBTB24O43167 697 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 HOXA2O43364 376 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 GDF9O60383 454 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 PRR20EP86478 221 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 PRR20CP86479 221 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 PRR20DP86480 221 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms