RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
SKI-202ENST00000478223 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
SKI-202ENST00000478223 NWD1Q149M9 1564 aa17.64■□□□□ 0.41
SKI-202ENST00000478223 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
SKI-202ENST00000478223 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
SKI-202ENST00000478223 PPLO60437 1756 aa17.63■□□□□ 0.41
SKI-202ENST00000478223 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
SKI-202ENST00000478223 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
SKI-202ENST00000478223 NEXMIFQ5QGS0 1516 aa17.61■□□□□ 0.41
SKI-202ENST00000478223 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
SKI-202ENST00000478223 SETD1AO15047 1707 aaKnown RBP17.59■□□□□ 0.41
SKI-202ENST00000478223 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
SKI-202ENST00000478223 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
SKI-202ENST00000478223 SLC26A8Q96RN1 970 aa17.58■□□□□ 0.4
SKI-202ENST00000478223 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
SKI-202ENST00000478223 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
SKI-202ENST00000478223 FOXD1Q16676 465 aa17.56■□□□□ 0.4
SKI-202ENST00000478223 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
SKI-202ENST00000478223 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
SKI-202ENST00000478223 SETBP1Q9Y6X0 1596 aa17.55■□□□□ 0.4
SKI-202ENST00000478223 UBAP1LF5GYI3 381 aa17.55■□□□□ 0.4
SKI-202ENST00000478223 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
SKI-202ENST00000478223 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.4
SKI-202ENST00000478223 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.4
SKI-202ENST00000478223 NKTRP30414 1462 aaKnown RBP17.51■□□□□ 0.39
SKI-202ENST00000478223 BCANQ96GW7 911 aa17.51■□□□□ 0.39
SKI-202ENST00000478223 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
SKI-202ENST00000478223 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
SKI-202ENST00000478223 KCNA6P17658 529 aa17.48■□□□□ 0.39
SKI-202ENST00000478223 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
SKI-202ENST00000478223 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
SKI-202ENST00000478223 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.47■□□□□ 0.39
SKI-202ENST00000478223 HDGFP51858 240 aaKnown RBP17.47■□□□□ 0.39
SKI-202ENST00000478223 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
SKI-202ENST00000478223 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
SKI-202ENST00000478223 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
SKI-202ENST00000478223 TBX22Q9Y458 520 aa17.45■□□□□ 0.38
SKI-202ENST00000478223 ROBO1Q9Y6N7 1651 aa17.45■□□□□ 0.38
SKI-202ENST00000478223 SPATA31E1Q6ZUB1 1445 aa17.44■□□□□ 0.38
SKI-202ENST00000478223 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
SKI-202ENST00000478223 TOM1O60784 492 aa17.43■□□□□ 0.38
SKI-202ENST00000478223 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
SKI-202ENST00000478223 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
SKI-202ENST00000478223 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
SKI-202ENST00000478223 METP08581 1390 aa17.4■□□□□ 0.38
SKI-202ENST00000478223 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
SKI-202ENST00000478223 HSPA1LP34931 641 aa17.38■□□□□ 0.37
SKI-202ENST00000478223 KNDC1Q76NI1 1749 aa17.36■□□□□ 0.37
SKI-202ENST00000478223 ASXL1Q8IXJ9 1541 aa17.36■□□□□ 0.37
SKI-202ENST00000478223 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
SKI-202ENST00000478223 AMOTL2Q9Y2J4 779 aa17.35■□□□□ 0.37
SKI-202ENST00000478223 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
SKI-202ENST00000478223 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
SKI-202ENST00000478223 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
SKI-202ENST00000478223 MSH6P52701 1360 aa17.33■□□□□ 0.36
SKI-202ENST00000478223 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
SKI-202ENST00000478223 ADGRF5Q8IZF2 1346 aa17.33■□□□□ 0.36
SKI-202ENST00000478223 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
SKI-202ENST00000478223 LAMC1P11047 1609 aa17.32■□□□□ 0.36
SKI-202ENST00000478223 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
SKI-202ENST00000478223 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
SKI-202ENST00000478223 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
SKI-202ENST00000478223 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
SKI-202ENST00000478223 HRCP23327 699 aa17.29■□□□□ 0.36
SKI-202ENST00000478223 MYOM2P54296 1465 aa17.29■□□□□ 0.36
SKI-202ENST00000478223 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
SKI-202ENST00000478223 PTCH1Q13635 1447 aa17.28■□□□□ 0.36
SKI-202ENST00000478223 COL16A1Q07092 1604 aaPredicted RBP17.28■□□□□ 0.36
SKI-202ENST00000478223 NHSL1Q5SYE7 1610 aa17.28■□□□□ 0.36
SKI-202ENST00000478223 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.35
SKI-202ENST00000478223 RGPD8O14715 1765 aaPredicted RBP17.27■□□□□ 0.35
SKI-202ENST00000478223 ROBO2Q9HCK4 1378 aa17.27■□□□□ 0.35
SKI-202ENST00000478223 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
SKI-202ENST00000478223 ADGRL3Q9HAR2 1447 aa17.25■□□□□ 0.35
SKI-202ENST00000478223 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
SKI-202ENST00000478223 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
SKI-202ENST00000478223 DCCP43146 1447 aa17.23■□□□□ 0.35
SKI-202ENST00000478223 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
SKI-202ENST00000478223 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
SKI-202ENST00000478223 MST1RQ04912 1400 aa17.22■□□□□ 0.35
SKI-202ENST00000478223 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
SKI-202ENST00000478223 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
SKI-202ENST00000478223 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
SKI-202ENST00000478223 TECPR2O15040 1411 aa17.2■□□□□ 0.34
SKI-202ENST00000478223 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
SKI-202ENST00000478223 CDC42BPGQ6DT37 1551 aa17.19■□□□□ 0.34
SKI-202ENST00000478223 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
SKI-202ENST00000478223 ATF3P18847 181 aa17.19■□□□□ 0.34
SKI-202ENST00000478223 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
SKI-202ENST00000478223 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
SKI-202ENST00000478223 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
SKI-202ENST00000478223 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
SKI-202ENST00000478223 KIAA1210Q9ULL0 1709 aa17.18■□□□□ 0.34
SKI-202ENST00000478223 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
SKI-202ENST00000478223 CFAP70Q5T0N1 1121 aa17.17■□□□□ 0.34
SKI-202ENST00000478223 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
SKI-202ENST00000478223 STK26Q9P289 416 aa17.16■□□□□ 0.34
SKI-202ENST00000478223 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
SKI-202ENST00000478223 BRINP3Q76B58 766 aa17.14■□□□□ 0.33
SKI-202ENST00000478223 WAPLQ7Z5K2 1190 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms