RNA–Protein interactions for RNA: ENST00000477216.1

SKIL-208, Transcript of SKI like proto-oncogene, humanhuman

TSL 4

Gene SKIL, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-208ENST00000477216 NAIPQ13075 1403 aa37.54■■■■□ 3.6
SKIL-208ENST00000477216 MSH6P52701 1360 aa37.54■■■■□ 3.6
SKIL-208ENST00000477216 TET3O43151 1660 aa37.53■■■■□ 3.6
SKIL-208ENST00000477216 HFM1A2PYH4 1435 aa37.53■■■■□ 3.6
SKIL-208ENST00000477216 ROBO1Q9Y6N7 1651 aa37.53■■■■□ 3.6
SKIL-208ENST00000477216 BCANQ96GW7 911 aa37.5■■■■□ 3.59
SKIL-208ENST00000477216 SLC26A8Q96RN1 970 aa37.5■■■■□ 3.59
SKIL-208ENST00000477216 ADGRB3O60242 1522 aa37.5■■■■□ 3.59
SKIL-208ENST00000477216 GCC2Q8IWJ2 1684 aa37.5■■■■□ 3.59
SKIL-208ENST00000477216 NOS1P29475 1434 aa37.49■■■■□ 3.59
SKIL-208ENST00000477216 NWD1Q149M9 1564 aa37.48■■■■□ 3.59
SKIL-208ENST00000477216 RPRD2Q5VT52 1461 aaKnown RBP37.46■■■■□ 3.59
SKIL-208ENST00000477216 POTEAQ6S8J7 498 aa37.42■■■■□ 3.58
SKIL-208ENST00000477216 SLAIN2Q9P270 581 aa37.42■■■■□ 3.58
SKIL-208ENST00000477216 JCADQ9P266 1359 aa37.41■■■■□ 3.58
SKIL-208ENST00000477216 NCOA3Q9Y6Q9 1424 aa37.39■■■■□ 3.58
SKIL-208ENST00000477216 UNC13BO14795 1591 aa37.38■■■■□ 3.58
SKIL-208ENST00000477216 PLEKHG1Q9ULL1 1385 aa37.37■■■■□ 3.57
SKIL-208ENST00000477216 PPP1R15AO75807 674 aaPredicted RBP37.36■■■■□ 3.57
SKIL-208ENST00000477216 PHLPP1O60346 1717 aa37.34■■■■□ 3.57
SKIL-208ENST00000477216 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.33■■■■□ 3.57
SKIL-208ENST00000477216 SETD5Q9C0A6 1442 aa37.3■■■■□ 3.56
SKIL-208ENST00000477216 TRIM26Q12899 539 aaPredicted RBP37.3■■■■□ 3.56
SKIL-208ENST00000477216 RBM33Q96EV2 1170 aaKnown RBP37.3■■■■□ 3.56
SKIL-208ENST00000477216 TBX22Q9Y458 520 aa37.29■■■■□ 3.56
SKIL-208ENST00000477216 CHD2O14647 1828 aaKnown RBP37.28■■■■□ 3.56
SKIL-208ENST00000477216 SPATA31A6Q5VVP1 1343 aa37.28■■■■□ 3.56
SKIL-208ENST00000477216 ZFYVE9O95405 1425 aa37.27■■■■□ 3.56
SKIL-208ENST00000477216 NUP155O75694 1391 aa37.27■■■■□ 3.56
SKIL-208ENST00000477216 RIMS2Q9UQ26 1411 aa37.26■■■■□ 3.55
SKIL-208ENST00000477216 C14orf37Q86TY3 774 aa37.23■■■■□ 3.55
SKIL-208ENST00000477216 CADPS2Q86UW7 1296 aa37.23■■■■□ 3.55
SKIL-208ENST00000477216 IQGAP3Q86VI3 1631 aa37.22■■■■□ 3.55
SKIL-208ENST00000477216 PIK3R4Q99570 1358 aa37.22■■■■□ 3.55
SKIL-208ENST00000477216 ZNF772Q68DY9 489 aaPredicted RBP37.22■■■■□ 3.55
SKIL-208ENST00000477216 RAB3GAP2Q9H2M9 1393 aa37.19■■■■□ 3.54
SKIL-208ENST00000477216 DIP2AQ14689 1571 aa37.18■■■■□ 3.54
SKIL-208ENST00000477216 ATF3P18847 181 aa37.18■■■■□ 3.54
SKIL-208ENST00000477216 MEX3CQ5U5Q3 659 aaKnown RBP37.18■■■■□ 3.54
SKIL-208ENST00000477216 TRIM52Q96A61 297 aa37.18■■■■□ 3.54
SKIL-208ENST00000477216 C19orf44Q9H6X5 657 aa37.17■■■■□ 3.54
SKIL-208ENST00000477216 TMEM131LA2VDJ0 1609 aa37.17■■■■□ 3.54
SKIL-208ENST00000477216 COL16A1Q07092 1604 aaPredicted RBP37.15■■■■□ 3.54
SKIL-208ENST00000477216 MYO5BQ9ULV0 1848 aa37.12■■■■□ 3.53
SKIL-208ENST00000477216 CHGAP10645 457 aaKnown RBP37.1■■■■□ 3.53
SKIL-208ENST00000477216 ACIN1Q9UKV3 1341 aaKnown RBP37.1■■■■□ 3.53
SKIL-208ENST00000477216 AHDC1Q5TGY3 1603 aaPredicted RBP37.09■■■■□ 3.53
SKIL-208ENST00000477216 SHPRHQ149N8 1683 aa37.05■■■■□ 3.52
SKIL-208ENST00000477216 HRCP23327 699 aa37.04■■■■□ 3.52
SKIL-208ENST00000477216 SETD1AO15047 1707 aaKnown RBP37.03■■■■□ 3.52
SKIL-208ENST00000477216 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.03■■■■□ 3.52
SKIL-208ENST00000477216 TRPM2O94759 1503 aa37.03■■■■□ 3.52
SKIL-208ENST00000477216 ADAMTS13Q76LX8 1427 aa37.02■■■■□ 3.52
SKIL-208ENST00000477216 E9PCH4 1651 aa37.02■■■■□ 3.52
SKIL-208ENST00000477216 SLC4A1APQ9BWU0 796 aaKnown RBP37.01■■■■□ 3.52
SKIL-208ENST00000477216 DCCP43146 1447 aa37.01■■■■□ 3.51
SKIL-208ENST00000477216 LRP6O75581 1613 aa36.98■■■■□ 3.51
SKIL-208ENST00000477216 RXRBP28702 533 aa36.97■■■■□ 3.51
SKIL-208ENST00000477216 AMOTL2Q9Y2J4 779 aa36.95■■■■□ 3.51
SKIL-208ENST00000477216 UPF1Q92900 1129 aaKnown RBP eCLIP36.94■■■■□ 3.5
SKIL-208ENST00000477216 CDK12Q9NYV4 1490 aaPredicted RBP36.94■■■■□ 3.5
SKIL-208ENST00000477216 MPHOSPH9Q99550 1183 aa36.93■■■■□ 3.5
SKIL-208ENST00000477216 BRINP3Q76B58 766 aa36.9■■■■□ 3.5
SKIL-208ENST00000477216 NUTM2DQ5VT03 806 aaPredicted RBP36.89■■■■□ 3.5
SKIL-208ENST00000477216 LRRC59Q96AG4 307 aaKnown RBP36.86■■■■□ 3.49
SKIL-208ENST00000477216 PCGF6Q9BYE7 350 aa36.84■■■■□ 3.49
SKIL-208ENST00000477216 ASXL1Q8IXJ9 1541 aa36.81■■■■□ 3.48
SKIL-208ENST00000477216 NUTM2BA6NNL0 878 aaPredicted RBP36.81■■■■□ 3.48
SKIL-208ENST00000477216 NUTM2EB1AL46 878 aaPredicted RBP36.81■■■■□ 3.48
SKIL-208ENST00000477216 NUTM2AQ8IVF1 878 aaPredicted RBP36.81■■■■□ 3.48
SKIL-208ENST00000477216 SPHKAPQ2M3C7 1700 aa36.81■■■■□ 3.48
SKIL-208ENST00000477216 FOXD1Q16676 465 aa36.8■■■■□ 3.48
SKIL-208ENST00000477216 SETBP1Q9Y6X0 1596 aa36.79■■■■□ 3.48
SKIL-208ENST00000477216 PTPRUQ92729 1446 aa36.78■■■■□ 3.48
SKIL-208ENST00000477216 AFF2P51816 1311 aa36.77■■■■□ 3.48
SKIL-208ENST00000477216 XRN1Q8IZH2 1706 aaKnown RBP36.76■■■■□ 3.47
SKIL-208ENST00000477216 MST1RQ04912 1400 aa36.74■■■■□ 3.47
SKIL-208ENST00000477216 ZNF326Q5BKZ1 582 aaKnown RBP36.73■■■■□ 3.47
SKIL-208ENST00000477216 NHSL1Q5SYE7 1610 aa36.73■■■■□ 3.47
SKIL-208ENST00000477216 RBM6P78332 1123 aaKnown RBP36.7■■■■□ 3.47
SKIL-208ENST00000477216 ADGRL3Q9HAR2 1447 aa36.68■■■■□ 3.46
SKIL-208ENST00000477216 NRXN3Q9Y4C0 1643 aa36.67■■■■□ 3.46
SKIL-208ENST00000477216 NGLY1Q96IV0 654 aa36.65■■■■□ 3.46
SKIL-208ENST00000477216 QTRT2Q9H974 415 aaKnown RBP36.65■■■■□ 3.46
SKIL-208ENST00000477216 CLTCL1P53675 1640 aa36.65■■■■□ 3.46
SKIL-208ENST00000477216 C8orf37Q96NL8 207 aa36.64■■■■□ 3.46
SKIL-208ENST00000477216 METP08581 1390 aa36.61■■■■□ 3.45
SKIL-208ENST00000477216 PNPLA6Q8IY17 1366 aa36.61■■■■□ 3.45
SKIL-208ENST00000477216 CCDC144AA2RUR9 1427 aa36.59■■■■□ 3.45
SKIL-208ENST00000477216 ANKRD30BQ9BXX2 1392 aa36.57■■■■□ 3.45
SKIL-208ENST00000477216 DHX57Q6P158 1386 aaKnown RBP36.54■■■■□ 3.44
SKIL-208ENST00000477216 RGS12O14924 1447 aa36.53■■■■□ 3.44
SKIL-208ENST00000477216 VGFO15240 615 aaPredicted RBP36.51■■■■□ 3.44
SKIL-208ENST00000477216 ATAD2Q6PL18 1390 aa36.51■■■■□ 3.43
SKIL-208ENST00000477216 PTCH1Q13635 1447 aa36.51■■■■□ 3.43
SKIL-208ENST00000477216 C1orf167Q5SNV9 1468 aa36.5■■■■□ 3.43
SKIL-208ENST00000477216 NALCNQ8IZF0 1738 aa36.49■■■■□ 3.43
SKIL-208ENST00000477216 NEXMIFQ5QGS0 1516 aa36.49■■■■□ 3.43
SKIL-208ENST00000477216 LAMC1P11047 1609 aa36.48■■■■□ 3.43
SKIL-208ENST00000477216 KIF1BO60333 1816 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms