RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 TOM1O60784 492 aa48.59■■■■■ 5.37
CHKB-207ENST00000476289 PLEKHG1Q9ULL1 1385 aa48.59■■■■■ 5.37
CHKB-207ENST00000476289 SENP3Q9H4L4 574 aaPredicted RBP48.58■■■■■ 5.37
CHKB-207ENST00000476289 XIRP1Q702N8 1843 aaKnown RBP48.56■■■■■ 5.36
CHKB-207ENST00000476289 PPP1R15AO75807 674 aaPredicted RBP48.55■■■■■ 5.36
CHKB-207ENST00000476289 PIP4K2BP78356 416 aa48.55■■■■■ 5.36
CHKB-207ENST00000476289 BCANQ96GW7 911 aa48.53■■■■■ 5.36
CHKB-207ENST00000476289 SCAF1Q9H7N4 1312 aaKnown RBP48.53■■■■■ 5.36
CHKB-207ENST00000476289 HDGFP51858 240 aaKnown RBP48.51■■■■■ 5.36
CHKB-207ENST00000476289 NWD1Q149M9 1564 aa48.49■■■■■ 5.35
CHKB-207ENST00000476289 KCNA6P17658 529 aa48.49■■■■■ 5.35
CHKB-207ENST00000476289 TRIM52Q96A61 297 aa48.49■■■■■ 5.35
CHKB-207ENST00000476289 TRPM2O94759 1503 aa48.48■■■■■ 5.35
CHKB-207ENST00000476289 CLTCL1P53675 1640 aa48.48■■■■■ 5.35
CHKB-207ENST00000476289 NUTM2DQ5VT03 806 aaPredicted RBP48.48■■■■■ 5.35
CHKB-207ENST00000476289 ABCF1Q8NE71 845 aaKnown RBP eCLIP48.48■■■■■ 5.35
CHKB-207ENST00000476289 NKTRP30414 1462 aaKnown RBP48.39■■■■■ 5.34
CHKB-207ENST00000476289 ADAMTS13Q76LX8 1427 aa48.39■■■■■ 5.34
CHKB-207ENST00000476289 TMEM94Q12767 1356 aa48.39■■■■■ 5.34
CHKB-207ENST00000476289 CHD2O14647 1828 aaKnown RBP48.37■■■■■ 5.33
CHKB-207ENST00000476289 HSPA1LP34931 641 aa48.35■■■■■ 5.33
CHKB-207ENST00000476289 SLC4A1APQ9BWU0 796 aaKnown RBP48.35■■■■■ 5.33
CHKB-207ENST00000476289 TBX22Q9Y458 520 aa48.33■■■■■ 5.33
CHKB-207ENST00000476289 DIP2AQ14689 1571 aa48.33■■■■■ 5.33
CHKB-207ENST00000476289 PROSER2Q86WR7 435 aaPredicted RBP48.31■■■■■ 5.32
CHKB-207ENST00000476289 RBM33Q96EV2 1170 aaKnown RBP48.31■■■■■ 5.32
CHKB-207ENST00000476289 KIF1BO60333 1816 aa48.28■■■■■ 5.32
CHKB-207ENST00000476289 ZNF326Q5BKZ1 582 aaKnown RBP48.28■■■■■ 5.32
CHKB-207ENST00000476289 NRXN3Q9Y4C0 1643 aa48.25■■■■■ 5.31
CHKB-207ENST00000476289 NEXMIFQ5QGS0 1516 aa48.24■■■■■ 5.31
CHKB-207ENST00000476289 DISP3Q9P2K9 1392 aa48.23■■■■■ 5.31
CHKB-207ENST00000476289 SETBP1Q9Y6X0 1596 aa48.21■■■■■ 5.31
CHKB-207ENST00000476289 PIK3R4Q99570 1358 aa48.17■■■■■ 5.3
CHKB-207ENST00000476289 FOXD1Q16676 465 aa48.17■■■■■ 5.3
CHKB-207ENST00000476289 PTPRUQ92729 1446 aa48.12■■■■■ 5.29
CHKB-207ENST00000476289 SETD5Q9C0A6 1442 aa48.1■■■■■ 5.29
CHKB-207ENST00000476289 MPHOSPH9Q99550 1183 aa48.08■■■■■ 5.29
CHKB-207ENST00000476289 MSH6P52701 1360 aa48.08■■■■■ 5.29
CHKB-207ENST00000476289 XRN1Q8IZH2 1706 aaKnown RBP48.03■■■■■ 5.28
CHKB-207ENST00000476289 FAM135BQ49AJ0 1406 aa48.02■■■■■ 5.28
CHKB-207ENST00000476289 AMOTL2Q9Y2J4 779 aa48.02■■■■■ 5.28
CHKB-207ENST00000476289 METP08581 1390 aa48■■■■■ 5.28
CHKB-207ENST00000476289 NCOA3Q9Y6Q9 1424 aa47.99■■■■■ 5.27
CHKB-207ENST00000476289 ROBO1Q9Y6N7 1651 aa47.99■■■■■ 5.27
CHKB-207ENST00000476289 PPLO60437 1756 aa47.96■■■■■ 5.27
CHKB-207ENST00000476289 RAB3GAP2Q9H2M9 1393 aa47.96■■■■■ 5.27
CHKB-207ENST00000476289 CCDC144AA2RUR9 1427 aa47.96■■■■■ 5.27
CHKB-207ENST00000476289 MED1Q15648 1581 aaPredicted RBP47.95■■■■■ 5.27
CHKB-207ENST00000476289 RPGRIP1LQ68CZ1 1315 aa47.92■■■■■ 5.26
CHKB-207ENST00000476289 SIPA1L2Q9P2F8 1722 aaPredicted RBP47.9■■■■■ 5.26
CHKB-207ENST00000476289 VGFO15240 615 aaPredicted RBP47.9■■■■■ 5.26
CHKB-207ENST00000476289 C14orf37Q86TY3 774 aa47.9■■■■■ 5.26
CHKB-207ENST00000476289 SETD1AO15047 1707 aaKnown RBP47.9■■■■■ 5.26
CHKB-207ENST00000476289 ACIN1Q9UKV3 1341 aaKnown RBP47.89■■■■■ 5.26
CHKB-207ENST00000476289 ILDR2Q71H61 639 aa47.89■■■■■ 5.26
CHKB-207ENST00000476289 SLAIN2Q9P270 581 aa47.87■■■■■ 5.25
CHKB-207ENST00000476289 SPATA31E1Q6ZUB1 1445 aa47.86■■■■■ 5.25
CHKB-207ENST00000476289 C19orf44Q9H6X5 657 aa47.81■■■■■ 5.24
CHKB-207ENST00000476289 IFT172Q9UG01 1749 aa47.77■■■■■ 5.24
CHKB-207ENST00000476289 RGL3Q3MIN7 710 aa47.76■■■■■ 5.24
CHKB-207ENST00000476289 CADPS2Q86UW7 1296 aa47.74■■■■■ 5.23
CHKB-207ENST00000476289 ATF3P18847 181 aa47.73■■■■■ 5.23
CHKB-207ENST00000476289 ADGRF5Q8IZF2 1346 aa47.7■■■■■ 5.23
CHKB-207ENST00000476289 DCCP43146 1447 aa47.7■■■■■ 5.23
CHKB-207ENST00000476289 PHLPP1O60346 1717 aa47.67■■■■■ 5.22
CHKB-207ENST00000476289 NALCNQ8IZF0 1738 aa47.67■■■■■ 5.22
CHKB-207ENST00000476289 PTCH1Q13635 1447 aa47.65■■■■■ 5.22
CHKB-207ENST00000476289 ADGRL3Q9HAR2 1447 aa47.64■■■■■ 5.22
CHKB-207ENST00000476289 ANKRD30BQ9BXX2 1392 aa47.64■■■■■ 5.22
CHKB-207ENST00000476289 PRAG1Q86YV5 1406 aa47.62■■■■■ 5.21
CHKB-207ENST00000476289 ROBO2Q9HCK4 1378 aa47.62■■■■■ 5.21
CHKB-207ENST00000476289 COL16A1Q07092 1604 aaPredicted RBP47.58■■■■■ 5.21
CHKB-207ENST00000476289 MST1RQ04912 1400 aa47.56■■■■■ 5.2
CHKB-207ENST00000476289 PIK3C2GO75747 1445 aa47.55■■■■■ 5.2
CHKB-207ENST00000476289 HRCP23327 699 aa47.54■■■■■ 5.2
CHKB-207ENST00000476289 AHDC1Q5TGY3 1603 aaPredicted RBP47.54■■■■■ 5.2
CHKB-207ENST00000476289 ASXL1Q8IXJ9 1541 aa47.51■■■■■ 5.2
CHKB-207ENST00000476289 BRINP3Q76B58 766 aa47.51■■■■■ 5.2
CHKB-207ENST00000476289 PHF23Q9BUL5 403 aaPredicted RBP47.5■■■■■ 5.19
CHKB-207ENST00000476289 MYOM2P54296 1465 aa47.44■■■■■ 5.18
CHKB-207ENST00000476289 JCADQ9P266 1359 aa47.43■■■■■ 5.18
CHKB-207ENST00000476289 NRXN1Q9ULB1 1477 aa47.43■■■■■ 5.18
CHKB-207ENST00000476289 TECPR2O15040 1411 aa47.39■■■■■ 5.18
CHKB-207ENST00000476289 LRPPRCP42704 1394 aaKnown RBP47.38■■■■■ 5.18
CHKB-207ENST00000476289 SOCS7O14512 581 aa47.38■■■■■ 5.18
CHKB-207ENST00000476289 TMEM132EQ6IEE7 984 aa47.38■■■■■ 5.18
CHKB-207ENST00000476289 NHSL1Q5SYE7 1610 aa47.37■■■■■ 5.17
CHKB-207ENST00000476289 KNDC1Q76NI1 1749 aa47.36■■■■■ 5.17
CHKB-207ENST00000476289 STK26Q9P289 416 aa47.36■■■■■ 5.17
CHKB-207ENST00000476289 C1orf167Q5SNV9 1468 aa47.33■■■■■ 5.17
CHKB-207ENST00000476289 RGS17Q9UGC6 210 aaPredicted RBP47.31■■■■■ 5.16
CHKB-207ENST00000476289 ABCC11Q96J66 1382 aa47.31■■■■■ 5.16
CHKB-207ENST00000476289 LAMC1P11047 1609 aa47.3■■■■■ 5.16
CHKB-207ENST00000476289 C14orf93Q9H972 538 aaKnown RBP47.3■■■■■ 5.16
CHKB-207ENST00000476289 YTHDC2Q9H6S0 1430 aaKnown RBP47.3■■■■■ 5.16
CHKB-207ENST00000476289 SHPRHQ149N8 1683 aa47.29■■■■■ 5.16
CHKB-207ENST00000476289 CDC42BPGQ6DT37 1551 aa47.27■■■■■ 5.16
CHKB-207ENST00000476289 CFAP70Q5T0N1 1121 aa47.26■■■■■ 5.16
CHKB-207ENST00000476289 WAPLQ7Z5K2 1190 aa47.26■■■■■ 5.16
CHKB-207ENST00000476289 PLEKHH1Q9ULM0 1364 aa47.24■■■■■ 5.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms