RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
TTC38-206ENST00000475467 BCANQ96GW7 911 aa19.09■□□□□ 0.65
TTC38-206ENST00000475467 SLC26A8Q96RN1 970 aa19.09■□□□□ 0.65
TTC38-206ENST00000475467 PLEKHG1Q9ULL1 1385 aa19.08■□□□□ 0.65
TTC38-206ENST00000475467 NWD1Q149M9 1564 aa19.08■□□□□ 0.65
TTC38-206ENST00000475467 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
TTC38-206ENST00000475467 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
TTC38-206ENST00000475467 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
TTC38-206ENST00000475467 ROCK1Q13464 1354 aa19.05■□□□□ 0.64
TTC38-206ENST00000475467 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
TTC38-206ENST00000475467 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
TTC38-206ENST00000475467 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
TTC38-206ENST00000475467 GCC2Q8IWJ2 1684 aa19.02■□□□□ 0.64
TTC38-206ENST00000475467 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
TTC38-206ENST00000475467 RGS17Q9UGC6 210 aaPredicted RBP19.01■□□□□ 0.63
TTC38-206ENST00000475467 ROBO1Q9Y6N7 1651 aa19.01■□□□□ 0.63
TTC38-206ENST00000475467 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
TTC38-206ENST00000475467 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
TTC38-206ENST00000475467 UNC13BO14795 1591 aa18.99■□□□□ 0.63
TTC38-206ENST00000475467 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
TTC38-206ENST00000475467 JCADQ9P266 1359 aa18.98■□□□□ 0.63
TTC38-206ENST00000475467 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
TTC38-206ENST00000475467 C19orf44Q9H6X5 657 aa18.96■□□□□ 0.63
TTC38-206ENST00000475467 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
TTC38-206ENST00000475467 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
TTC38-206ENST00000475467 ATF3P18847 181 aa18.93■□□□□ 0.62
TTC38-206ENST00000475467 C14orf37Q86TY3 774 aa18.93■□□□□ 0.62
TTC38-206ENST00000475467 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
TTC38-206ENST00000475467 SPATA31A6Q5VVP1 1343 aa18.93■□□□□ 0.62
TTC38-206ENST00000475467 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
TTC38-206ENST00000475467 NUP155O75694 1391 aa18.92■□□□□ 0.62
TTC38-206ENST00000475467 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
TTC38-206ENST00000475467 E9PCH4 1651 aa18.91■□□□□ 0.62
TTC38-206ENST00000475467 PHLPP1O60346 1717 aa18.91■□□□□ 0.62
TTC38-206ENST00000475467 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
TTC38-206ENST00000475467 TRPM2O94759 1503 aa18.9■□□□□ 0.62
TTC38-206ENST00000475467 DCCP43146 1447 aa18.88■□□□□ 0.61
TTC38-206ENST00000475467 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
TTC38-206ENST00000475467 AMOTL2Q9Y2J4 779 aa18.86■□□□□ 0.61
TTC38-206ENST00000475467 COL16A1Q07092 1604 aaPredicted RBP18.85■□□□□ 0.61
TTC38-206ENST00000475467 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
TTC38-206ENST00000475467 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
TTC38-206ENST00000475467 SETBP1Q9Y6X0 1596 aa18.81■□□□□ 0.6
TTC38-206ENST00000475467 MEX3CQ5U5Q3 659 aaKnown RBP18.8■□□□□ 0.6
TTC38-206ENST00000475467 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
TTC38-206ENST00000475467 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
TTC38-206ENST00000475467 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
TTC38-206ENST00000475467 BRINP3Q76B58 766 aa18.78■□□□□ 0.6
TTC38-206ENST00000475467 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.6
TTC38-206ENST00000475467 LRRC59Q96AG4 307 aaKnown RBP18.77■□□□□ 0.6
TTC38-206ENST00000475467 PTPRUQ92729 1446 aa18.76■□□□□ 0.59
TTC38-206ENST00000475467 ITGAEP38570 1179 aa18.76■□□□□ 0.59
TTC38-206ENST00000475467 SETD5Q9C0A6 1442 aa18.75■□□□□ 0.59
TTC38-206ENST00000475467 XRN1Q8IZH2 1706 aaKnown RBP18.75■□□□□ 0.59
TTC38-206ENST00000475467 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
TTC38-206ENST00000475467 CDK12Q9NYV4 1490 aaPredicted RBP18.72■□□□□ 0.59
TTC38-206ENST00000475467 LRP6O75581 1613 aa18.72■□□□□ 0.59
TTC38-206ENST00000475467 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
TTC38-206ENST00000475467 RXRBP28702 533 aa18.72■□□□□ 0.59
TTC38-206ENST00000475467 MST1RQ04912 1400 aa18.72■□□□□ 0.59
TTC38-206ENST00000475467 ADGRL3Q9HAR2 1447 aa18.72■□□□□ 0.59
TTC38-206ENST00000475467 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
TTC38-206ENST00000475467 ASXL1Q8IXJ9 1541 aa18.71■□□□□ 0.59
TTC38-206ENST00000475467 METP08581 1390 aa18.69■□□□□ 0.58
TTC38-206ENST00000475467 RRBP1Q9P2E9 1410 aaKnown RBP18.68■□□□□ 0.58
TTC38-206ENST00000475467 KIF1BO60333 1816 aa18.67■□□□□ 0.58
TTC38-206ENST00000475467 NHSL1Q5SYE7 1610 aa18.67■□□□□ 0.58
TTC38-206ENST00000475467 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
TTC38-206ENST00000475467 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
TTC38-206ENST00000475467 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
TTC38-206ENST00000475467 UPF1Q92900 1129 aaKnown RBP eCLIP18.65■□□□□ 0.58
TTC38-206ENST00000475467 NAIPQ13075 1403 aa18.65■□□□□ 0.58
TTC38-206ENST00000475467 NUTM2BA6NNL0 878 aaPredicted RBP18.64■□□□□ 0.57
TTC38-206ENST00000475467 NUTM2EB1AL46 878 aaPredicted RBP18.64■□□□□ 0.57
TTC38-206ENST00000475467 NUTM2AQ8IVF1 878 aaPredicted RBP18.64■□□□□ 0.57
TTC38-206ENST00000475467 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
TTC38-206ENST00000475467 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
TTC38-206ENST00000475467 AFF2P51816 1311 aa18.63■□□□□ 0.57
TTC38-206ENST00000475467 RBM6P78332 1123 aaKnown RBP18.62■□□□□ 0.57
TTC38-206ENST00000475467 SETD1AO15047 1707 aaKnown RBP18.61■□□□□ 0.57
TTC38-206ENST00000475467 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
TTC38-206ENST00000475467 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
TTC38-206ENST00000475467 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
TTC38-206ENST00000475467 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
TTC38-206ENST00000475467 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
TTC38-206ENST00000475467 LAMC1P11047 1609 aa18.6■□□□□ 0.57
TTC38-206ENST00000475467 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
TTC38-206ENST00000475467 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
TTC38-206ENST00000475467 QTRT2Q9H974 415 aaKnown RBP18.58■□□□□ 0.56
TTC38-206ENST00000475467 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
TTC38-206ENST00000475467 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
TTC38-206ENST00000475467 FOXD1Q16676 465 aa18.56■□□□□ 0.56
TTC38-206ENST00000475467 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
TTC38-206ENST00000475467 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
TTC38-206ENST00000475467 LRPPRCP42704 1394 aaKnown RBP18.54■□□□□ 0.56
TTC38-206ENST00000475467 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
TTC38-206ENST00000475467 TRPC5Q9UL62 973 aaPredicted RBP18.52■□□□□ 0.56
TTC38-206ENST00000475467 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
TTC38-206ENST00000475467 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
TTC38-206ENST00000475467 ANKRD30BQ9BXX2 1392 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms