RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SETD1AO15047 1707 aaKnown RBP24.99■■□□□ 1.59
ITGB1-211ENST00000475184 MSH6P52701 1360 aa24.98■■□□□ 1.59
ITGB1-211ENST00000475184 CHIC2Q9UKJ5 165 aa24.96■■□□□ 1.59
ITGB1-211ENST00000475184 SLC52A1Q9NWF4 448 aa24.95■■□□□ 1.58
ITGB1-211ENST00000475184 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
ITGB1-211ENST00000475184 BCANQ96GW7 911 aa24.94■■□□□ 1.58
ITGB1-211ENST00000475184 RPRD2Q5VT52 1461 aaKnown RBP24.92■■□□□ 1.58
ITGB1-211ENST00000475184 SLAIN2Q9P270 581 aa24.92■■□□□ 1.58
ITGB1-211ENST00000475184 APLP2Q06481 763 aa24.91■■□□□ 1.58
ITGB1-211ENST00000475184 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
ITGB1-211ENST00000475184 JCADQ9P266 1359 aa24.91■■□□□ 1.58
ITGB1-211ENST00000475184 COL16A1Q07092 1604 aaPredicted RBP24.9■■□□□ 1.58
ITGB1-211ENST00000475184 ADGRL2O95490 1459 aa24.89■■□□□ 1.58
ITGB1-211ENST00000475184 PLEKHG1Q9ULL1 1385 aa24.89■■□□□ 1.57
ITGB1-211ENST00000475184 TMEM131LA2VDJ0 1609 aa24.88■■□□□ 1.57
ITGB1-211ENST00000475184 RIMS2Q9UQ26 1411 aa24.86■■□□□ 1.57
ITGB1-211ENST00000475184 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
ITGB1-211ENST00000475184 ANKRD50Q9ULJ7 1429 aa24.83■■□□□ 1.57
ITGB1-211ENST00000475184 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.82■■□□□ 1.56
ITGB1-211ENST00000475184 NCOA3Q9Y6Q9 1424 aa24.81■■□□□ 1.56
ITGB1-211ENST00000475184 HDGFP51858 240 aaKnown RBP24.81■■□□□ 1.56
ITGB1-211ENST00000475184 LRP6O75581 1613 aa24.8■■□□□ 1.56
ITGB1-211ENST00000475184 SHPRHQ149N8 1683 aa24.8■■□□□ 1.56
ITGB1-211ENST00000475184 DIP2AQ14689 1571 aa24.79■■□□□ 1.56
ITGB1-211ENST00000475184 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
ITGB1-211ENST00000475184 TBX22Q9Y458 520 aa24.78■■□□□ 1.56
ITGB1-211ENST00000475184 UNC13BO14795 1591 aa24.77■■□□□ 1.56
ITGB1-211ENST00000475184 C14orf37Q86TY3 774 aa24.77■■□□□ 1.56
ITGB1-211ENST00000475184 E9PCH4 1651 aa24.77■■□□□ 1.56
ITGB1-211ENST00000475184 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
ITGB1-211ENST00000475184 ADAMTS13Q76LX8 1427 aa24.75■■□□□ 1.55
ITGB1-211ENST00000475184 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
ITGB1-211ENST00000475184 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
ITGB1-211ENST00000475184 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
ITGB1-211ENST00000475184 CADPS2Q86UW7 1296 aa24.73■■□□□ 1.55
ITGB1-211ENST00000475184 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
ITGB1-211ENST00000475184 PIK3R4Q99570 1358 aa24.71■■□□□ 1.55
ITGB1-211ENST00000475184 ZNF772Q68DY9 489 aaPredicted RBP24.71■■□□□ 1.55
ITGB1-211ENST00000475184 C19orf44Q9H6X5 657 aa24.71■■□□□ 1.55
ITGB1-211ENST00000475184 ATF3P18847 181 aa24.7■■□□□ 1.54
ITGB1-211ENST00000475184 TRPM2O94759 1503 aa24.7■■□□□ 1.54
ITGB1-211ENST00000475184 NUTM2DQ5VT03 806 aaPredicted RBP24.69■■□□□ 1.54
ITGB1-211ENST00000475184 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
ITGB1-211ENST00000475184 TRIM52Q96A61 297 aa24.67■■□□□ 1.54
ITGB1-211ENST00000475184 UPF1Q92900 1129 aaKnown RBP eCLIP24.66■■□□□ 1.54
ITGB1-211ENST00000475184 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
ITGB1-211ENST00000475184 XRN1Q8IZH2 1706 aaKnown RBP24.63■■□□□ 1.53
ITGB1-211ENST00000475184 DCCP43146 1447 aa24.62■■□□□ 1.53
ITGB1-211ENST00000475184 PTPRUQ92729 1446 aa24.62■■□□□ 1.53
ITGB1-211ENST00000475184 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
ITGB1-211ENST00000475184 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
ITGB1-211ENST00000475184 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
ITGB1-211ENST00000475184 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
ITGB1-211ENST00000475184 RXRBP28702 533 aa24.6■■□□□ 1.53
ITGB1-211ENST00000475184 CDK12Q9NYV4 1490 aaPredicted RBP24.59■■□□□ 1.53
ITGB1-211ENST00000475184 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.53
ITGB1-211ENST00000475184 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.53
ITGB1-211ENST00000475184 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.53
ITGB1-211ENST00000475184 SETBP1Q9Y6X0 1596 aa24.57■■□□□ 1.52
ITGB1-211ENST00000475184 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
ITGB1-211ENST00000475184 SPHKAPQ2M3C7 1700 aa24.56■■□□□ 1.52
ITGB1-211ENST00000475184 SETD5Q9C0A6 1442 aa24.56■■□□□ 1.52
ITGB1-211ENST00000475184 MST1RQ04912 1400 aa24.54■■□□□ 1.52
ITGB1-211ENST00000475184 AFF2P51816 1311 aa24.54■■□□□ 1.52
ITGB1-211ENST00000475184 NUP155O75694 1391 aa24.53■■□□□ 1.52
ITGB1-211ENST00000475184 NALCNQ8IZF0 1738 aa24.51■■□□□ 1.51
ITGB1-211ENST00000475184 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
ITGB1-211ENST00000475184 ADGRL3Q9HAR2 1447 aa24.47■■□□□ 1.51
ITGB1-211ENST00000475184 METP08581 1390 aa24.47■■□□□ 1.51
ITGB1-211ENST00000475184 LRRC59Q96AG4 307 aaKnown RBP24.47■■□□□ 1.51
ITGB1-211ENST00000475184 RGS12O14924 1447 aa24.46■■□□□ 1.51
ITGB1-211ENST00000475184 PNPLA6Q8IY17 1366 aa24.44■■□□□ 1.5
ITGB1-211ENST00000475184 C8orf37Q96NL8 207 aa24.44■■□□□ 1.5
ITGB1-211ENST00000475184 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
ITGB1-211ENST00000475184 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
ITGB1-211ENST00000475184 NEXMIFQ5QGS0 1516 aa24.41■■□□□ 1.5
ITGB1-211ENST00000475184 KIF1BO60333 1816 aa24.41■■□□□ 1.5
ITGB1-211ENST00000475184 RBM6P78332 1123 aaKnown RBP24.41■■□□□ 1.5
ITGB1-211ENST00000475184 QTRT2Q9H974 415 aaKnown RBP24.41■■□□□ 1.5
ITGB1-211ENST00000475184 LAMC1P11047 1609 aa24.41■■□□□ 1.5
ITGB1-211ENST00000475184 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
ITGB1-211ENST00000475184 ITGAEP38570 1179 aa24.37■■□□□ 1.49
ITGB1-211ENST00000475184 C1orf167Q5SNV9 1468 aa24.36■■□□□ 1.49
ITGB1-211ENST00000475184 EP400Q96L91 3159 aa24.35■■□□□ 1.49
ITGB1-211ENST00000475184 ADAMTS2O95450 1211 aa24.34■■□□□ 1.49
ITGB1-211ENST00000475184 NGLY1Q96IV0 654 aa24.34■■□□□ 1.49
ITGB1-211ENST00000475184 PTCH1Q13635 1447 aa24.33■■□□□ 1.49
ITGB1-211ENST00000475184 ATAD2Q6PL18 1390 aa24.29■■□□□ 1.48
ITGB1-211ENST00000475184 SOS2Q07890 1332 aaPredicted RBP24.29■■□□□ 1.48
ITGB1-211ENST00000475184 COL22A1Q8NFW1 1626 aaPredicted RBP24.28■■□□□ 1.48
ITGB1-211ENST00000475184 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
ITGB1-211ENST00000475184 ORAI2Q96SN7 254 aa24.26■■□□□ 1.47
ITGB1-211ENST00000475184 USP21Q9UK80 565 aa24.26■■□□□ 1.47
ITGB1-211ENST00000475184 PRAG1Q86YV5 1406 aa24.26■■□□□ 1.47
ITGB1-211ENST00000475184 MARF1Q9Y4F3 1742 aaKnown RBP24.25■■□□□ 1.47
ITGB1-211ENST00000475184 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
ITGB1-211ENST00000475184 PPLO60437 1756 aa24.22■■□□□ 1.47
ITGB1-211ENST00000475184 ATRNO75882 1429 aa24.22■■□□□ 1.47
ITGB1-211ENST00000475184 FNBP4Q8N3X1 1017 aaPredicted RBP24.22■■□□□ 1.47
ITGB1-211ENST00000475184 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms