RNA–Protein interactions for RNA: ENST00000473724.1

SBF1-206, Transcript of SET binding factor 1, humanhuman

TSL 2

Gene SBF1, Length 446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-206ENST00000473724 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
SBF1-206ENST00000473724 E9PCH4 1651 aa20.16■□□□□ 0.82
SBF1-206ENST00000473724 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
SBF1-206ENST00000473724 NKTRP30414 1462 aaKnown RBP20.16■□□□□ 0.82
SBF1-206ENST00000473724 CHD2O14647 1828 aaKnown RBP20.16■□□□□ 0.82
SBF1-206ENST00000473724 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
SBF1-206ENST00000473724 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
SBF1-206ENST00000473724 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
SBF1-206ENST00000473724 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
SBF1-206ENST00000473724 PROSER2Q86WR7 435 aaPredicted RBP20.13■□□□□ 0.81
SBF1-206ENST00000473724 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
SBF1-206ENST00000473724 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
SBF1-206ENST00000473724 BCANQ96GW7 911 aa20.11■□□□□ 0.81
SBF1-206ENST00000473724 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
SBF1-206ENST00000473724 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
SBF1-206ENST00000473724 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.07■□□□□ 0.8
SBF1-206ENST00000473724 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
SBF1-206ENST00000473724 TBX22Q9Y458 520 aa20.06■□□□□ 0.8
SBF1-206ENST00000473724 NUP155O75694 1391 aa20.06■□□□□ 0.8
SBF1-206ENST00000473724 MSH6P52701 1360 aa20.06■□□□□ 0.8
SBF1-206ENST00000473724 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
SBF1-206ENST00000473724 DIP2AQ14689 1571 aa20.04■□□□□ 0.8
SBF1-206ENST00000473724 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.8
SBF1-206ENST00000473724 ITGAEP38570 1179 aa20.02■□□□□ 0.8
SBF1-206ENST00000473724 SPHKAPQ2M3C7 1700 aa20.02■□□□□ 0.79
SBF1-206ENST00000473724 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
SBF1-206ENST00000473724 SLAIN2Q9P270 581 aa20.01■□□□□ 0.79
SBF1-206ENST00000473724 PIK3R4Q99570 1358 aa20■□□□□ 0.79
SBF1-206ENST00000473724 PHLPP1O60346 1717 aa20■□□□□ 0.79
SBF1-206ENST00000473724 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
SBF1-206ENST00000473724 NUTM2DQ5VT03 806 aaPredicted RBP19.98■□□□□ 0.79
SBF1-206ENST00000473724 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
SBF1-206ENST00000473724 TRPM2O94759 1503 aa19.97■□□□□ 0.79
SBF1-206ENST00000473724 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
SBF1-206ENST00000473724 NRXN3Q9Y4C0 1643 aa19.93■□□□□ 0.78
SBF1-206ENST00000473724 SETBP1Q9Y6X0 1596 aa19.92■□□□□ 0.78
SBF1-206ENST00000473724 COL16A1Q07092 1604 aaPredicted RBP19.92■□□□□ 0.78
SBF1-206ENST00000473724 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
SBF1-206ENST00000473724 C19orf44Q9H6X5 657 aa19.92■□□□□ 0.78
SBF1-206ENST00000473724 RRBP1Q9P2E9 1410 aaKnown RBP19.92■□□□□ 0.78
SBF1-206ENST00000473724 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
SBF1-206ENST00000473724 JCADQ9P266 1359 aa19.91■□□□□ 0.78
SBF1-206ENST00000473724 PTPRUQ92729 1446 aa19.91■□□□□ 0.78
SBF1-206ENST00000473724 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
SBF1-206ENST00000473724 AMOTL2Q9Y2J4 779 aa19.9■□□□□ 0.78
SBF1-206ENST00000473724 KIF1BO60333 1816 aa19.9■□□□□ 0.78
SBF1-206ENST00000473724 CLTCL1P53675 1640 aa19.89■□□□□ 0.77
SBF1-206ENST00000473724 ATF3P18847 181 aa19.88■□□□□ 0.77
SBF1-206ENST00000473724 AHDC1Q5TGY3 1603 aaPredicted RBP19.87■□□□□ 0.77
SBF1-206ENST00000473724 POTEAQ6S8J7 498 aa19.87■□□□□ 0.77
SBF1-206ENST00000473724 NAIPQ13075 1403 aa19.86■□□□□ 0.77
SBF1-206ENST00000473724 ZNF326Q5BKZ1 582 aaKnown RBP19.86■□□□□ 0.77
SBF1-206ENST00000473724 DCCP43146 1447 aa19.85■□□□□ 0.77
SBF1-206ENST00000473724 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
SBF1-206ENST00000473724 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
SBF1-206ENST00000473724 METP08581 1390 aa19.82■□□□□ 0.76
SBF1-206ENST00000473724 SPATA31A6Q5VVP1 1343 aa19.81■□□□□ 0.76
SBF1-206ENST00000473724 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
SBF1-206ENST00000473724 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
SBF1-206ENST00000473724 LRP6O75581 1613 aa19.79■□□□□ 0.76
SBF1-206ENST00000473724 MST1RQ04912 1400 aa19.77■□□□□ 0.76
SBF1-206ENST00000473724 ASXL1Q8IXJ9 1541 aa19.77■□□□□ 0.76
SBF1-206ENST00000473724 NHSL1Q5SYE7 1610 aa19.77■□□□□ 0.76
SBF1-206ENST00000473724 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
SBF1-206ENST00000473724 NALCNQ8IZF0 1738 aa19.76■□□□□ 0.75
SBF1-206ENST00000473724 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
SBF1-206ENST00000473724 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
SBF1-206ENST00000473724 PPLO60437 1756 aa19.74■□□□□ 0.75
SBF1-206ENST00000473724 VGFO15240 615 aaPredicted RBP19.73■□□□□ 0.75
SBF1-206ENST00000473724 MEX3CQ5U5Q3 659 aaKnown RBP19.73■□□□□ 0.75
SBF1-206ENST00000473724 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
SBF1-206ENST00000473724 RPGRIP1LQ68CZ1 1315 aa19.72■□□□□ 0.75
SBF1-206ENST00000473724 ZNF772Q68DY9 489 aaPredicted RBP19.71■□□□□ 0.75
SBF1-206ENST00000473724 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
SBF1-206ENST00000473724 PTCH1Q13635 1447 aa19.7■□□□□ 0.74
SBF1-206ENST00000473724 PRAG1Q86YV5 1406 aa19.68■□□□□ 0.74
SBF1-206ENST00000473724 LAMC1P11047 1609 aa19.67■□□□□ 0.74
SBF1-206ENST00000473724 LRRC59Q96AG4 307 aaKnown RBP19.67■□□□□ 0.74
SBF1-206ENST00000473724 C1orf167Q5SNV9 1468 aa19.66■□□□□ 0.74
SBF1-206ENST00000473724 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
SBF1-206ENST00000473724 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
SBF1-206ENST00000473724 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
SBF1-206ENST00000473724 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
SBF1-206ENST00000473724 PNPLA6Q8IY17 1366 aa19.62■□□□□ 0.73
SBF1-206ENST00000473724 DDX17Q92841 729 aaKnown RBP19.62■□□□□ 0.73
SBF1-206ENST00000473724 IFT172Q9UG01 1749 aa19.61■□□□□ 0.73
SBF1-206ENST00000473724 FOXD1Q16676 465 aa19.6■□□□□ 0.73
SBF1-206ENST00000473724 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
SBF1-206ENST00000473724 CCDC144AA2RUR9 1427 aa19.59■□□□□ 0.73
SBF1-206ENST00000473724 AFF2P51816 1311 aa19.59■□□□□ 0.73
SBF1-206ENST00000473724 RXRBP28702 533 aa19.59■□□□□ 0.73
SBF1-206ENST00000473724 ORAI2Q96SN7 254 aa19.57■□□□□ 0.72
SBF1-206ENST00000473724 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
SBF1-206ENST00000473724 CDC42BPGQ6DT37 1551 aa19.57■□□□□ 0.72
SBF1-206ENST00000473724 SOS2Q07890 1332 aaPredicted RBP19.56■□□□□ 0.72
SBF1-206ENST00000473724 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
SBF1-206ENST00000473724 ANKRD30BQ9BXX2 1392 aa19.56■□□□□ 0.72
SBF1-206ENST00000473724 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
SBF1-206ENST00000473724 UPF1Q92900 1129 aaKnown RBP eCLIP19.54■□□□□ 0.72
SBF1-206ENST00000473724 C8orf37Q96NL8 207 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms