RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SLC52A1Q9NWF4 448 aa20.9■□□□□ 0.94
LMNA-213ENST00000473598 PRAG1Q86YV5 1406 aa20.89■□□□□ 0.93
LMNA-213ENST00000473598 ZNF142P52746 1687 aaPredicted RBP20.88■□□□□ 0.93
LMNA-213ENST00000473598 A2ML1A8K2U0 1454 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 IDI1Q13907 227 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 TRPM1Q7Z4N2 1603 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 MYO5BQ9ULV0 1848 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 RALGAPBQ86X10 1494 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
LMNA-213ENST00000473598 PPLO60437 1756 aa20.86■□□□□ 0.93
LMNA-213ENST00000473598 TMEM131LA2VDJ0 1609 aa20.85■□□□□ 0.93
LMNA-213ENST00000473598 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
LMNA-213ENST00000473598 MYOM2P54296 1465 aa20.83■□□□□ 0.92
LMNA-213ENST00000473598 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
LMNA-213ENST00000473598 RPGRIP1LQ68CZ1 1315 aa20.8■□□□□ 0.92
LMNA-213ENST00000473598 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
LMNA-213ENST00000473598 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
LMNA-213ENST00000473598 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
LMNA-213ENST00000473598 KIAA1210Q9ULL0 1709 aa20.78■□□□□ 0.92
LMNA-213ENST00000473598 LAMC1P11047 1609 aa20.77■□□□□ 0.92
LMNA-213ENST00000473598 NRXN1Q9ULB1 1477 aa20.77■□□□□ 0.92
LMNA-213ENST00000473598 ROCK2O75116 1388 aaKnown RBP20.77■□□□□ 0.92
LMNA-213ENST00000473598 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
LMNA-213ENST00000473598 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
LMNA-213ENST00000473598 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
LMNA-213ENST00000473598 KDM5AP29375 1690 aaKnown RBP20.75■□□□□ 0.91
LMNA-213ENST00000473598 CARD11Q9BXL7 1154 aa20.75■□□□□ 0.91
LMNA-213ENST00000473598 GPRASP1Q5JY77 1395 aa20.74■□□□□ 0.91
LMNA-213ENST00000473598 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
LMNA-213ENST00000473598 ADGRF5Q8IZF2 1346 aa20.74■□□□□ 0.91
LMNA-213ENST00000473598 STRCQ7RTU9 1775 aa20.74■□□□□ 0.91
LMNA-213ENST00000473598 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
LMNA-213ENST00000473598 NBPF1Q3BBV0 1214 aa20.72■□□□□ 0.91
LMNA-213ENST00000473598 USP47Q96K76 1375 aa20.72■□□□□ 0.91
LMNA-213ENST00000473598 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
LMNA-213ENST00000473598 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
LMNA-213ENST00000473598 TMEM2Q9UHN6 1383 aa20.7■□□□□ 0.9
LMNA-213ENST00000473598 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
LMNA-213ENST00000473598 LTKP29376 864 aa20.69■□□□□ 0.9
LMNA-213ENST00000473598 SLIT1O75093 1534 aa20.68■□□□□ 0.9
LMNA-213ENST00000473598 ARHGAP23Q9P227 1491 aa20.68■□□□□ 0.9
LMNA-213ENST00000473598 NUTM2DQ5VT03 806 aaPredicted RBP20.68■□□□□ 0.9
LMNA-213ENST00000473598 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
LMNA-213ENST00000473598 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
LMNA-213ENST00000473598 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
LMNA-213ENST00000473598 ANKLE2Q86XL3 938 aa20.66■□□□□ 0.9
LMNA-213ENST00000473598 CFAP70Q5T0N1 1121 aa20.65■□□□□ 0.9
LMNA-213ENST00000473598 TXNDC2Q86VQ3 553 aa20.65■□□□□ 0.9
LMNA-213ENST00000473598 SETBP1Q9Y6X0 1596 aa20.65■□□□□ 0.9
LMNA-213ENST00000473598 MIER1Q8N108 512 aa20.65■□□□□ 0.9
LMNA-213ENST00000473598 RIMS2Q9UQ26 1411 aa20.64■□□□□ 0.89
LMNA-213ENST00000473598 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
LMNA-213ENST00000473598 C14orf93Q9H972 538 aaKnown RBP20.62■□□□□ 0.89
LMNA-213ENST00000473598 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
LMNA-213ENST00000473598 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
LMNA-213ENST00000473598 ADGRB1O14514 1584 aa20.59■□□□□ 0.89
LMNA-213ENST00000473598 NPHP4O75161 1426 aaPredicted RBP20.58■□□□□ 0.89
LMNA-213ENST00000473598 MED14O60244 1454 aa20.58■□□□□ 0.89
LMNA-213ENST00000473598 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.885e-9■□□□□ 8
LMNA-213ENST00000473598 WASHC2AQ641Q2 1341 aa20.57■□□□□ 0.88
LMNA-213ENST00000473598 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
LMNA-213ENST00000473598 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
LMNA-213ENST00000473598 DMRT2Q9Y5R5 561 aa20.55■□□□□ 0.88
LMNA-213ENST00000473598 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
LMNA-213ENST00000473598 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
LMNA-213ENST00000473598 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
LMNA-213ENST00000473598 BCANQ96GW7 911 aa20.53■□□□□ 0.88
LMNA-213ENST00000473598 SLC26A8Q96RN1 970 aa20.53■□□□□ 0.88
LMNA-213ENST00000473598 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
LMNA-213ENST00000473598 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
LMNA-213ENST00000473598 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
LMNA-213ENST00000473598 PLEKHG1Q9ULL1 1385 aa20.52■□□□□ 0.88
LMNA-213ENST00000473598 ASXL1Q8IXJ9 1541 aa20.52■□□□□ 0.88
LMNA-213ENST00000473598 KIF7Q2M1P5 1343 aa20.51■□□□□ 0.87
LMNA-213ENST00000473598 TMEM132EQ6IEE7 984 aa20.51■□□□□ 0.87
LMNA-213ENST00000473598 TESK2Q96S53 571 aa20.5■□□□□ 0.87
LMNA-213ENST00000473598 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
LMNA-213ENST00000473598 ZNF335Q9H4Z2 1342 aaPredicted RBP20.48■□□□□ 0.87
LMNA-213ENST00000473598 ADAMTS13Q76LX8 1427 aa20.47■□□□□ 0.87
LMNA-213ENST00000473598 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
LMNA-213ENST00000473598 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.86
LMNA-213ENST00000473598 YTHDC2Q9H6S0 1430 aaKnown RBP20.43■□□□□ 0.86
LMNA-213ENST00000473598 TMF1P82094 1093 aa20.43■□□□□ 0.86
LMNA-213ENST00000473598 DISP3Q9P2K9 1392 aa20.42■□□□□ 0.86
LMNA-213ENST00000473598 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
LMNA-213ENST00000473598 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
LMNA-213ENST00000473598 STRCP1A6NGW2 1772 aa20.41■□□□□ 0.86
LMNA-213ENST00000473598 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
LMNA-213ENST00000473598 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
LMNA-213ENST00000473598 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.86
LMNA-213ENST00000473598 METP08581 1390 aa20.39■□□□□ 0.86
LMNA-213ENST00000473598 LTBP4Q8N2S1 1624 aa20.39■□□□□ 0.85
LMNA-213ENST00000473598 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
LMNA-213ENST00000473598 KNDC1Q76NI1 1749 aa20.38■□□□□ 0.85
LMNA-213ENST00000473598 STK26Q9P289 416 aa20.38■□□□□ 0.85
LMNA-213ENST00000473598 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
LMNA-213ENST00000473598 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
LMNA-213ENST00000473598 LRPPRCP42704 1394 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms