RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 TDRD9Q8NDG6 1382 aaKnown RBP7.09□□□□□ -1.27
LRCH3-213ENST00000471667 WDR97A6NE52 1622 aa7.09□□□□□ -1.27
LRCH3-213ENST00000471667 MAP3K7O43318 606 aa7.09□□□□□ -1.27
LRCH3-213ENST00000471667 E2F4Q16254 413 aa7.09□□□□□ -1.27
LRCH3-213ENST00000471667 TSR1Q2NL82 804 aaKnown RBP7.09□□□□□ -1.27
LRCH3-213ENST00000471667 CFAP44Q96MT7 982 aa7.09□□□□□ -1.27
LRCH3-213ENST00000471667 TARBP1Q13395 1621 aaKnown RBP7.09□□□□□ -1.28
LRCH3-213ENST00000471667 DIP2BQ9P265 1576 aa7.08□□□□□ -1.28
LRCH3-213ENST00000471667 MAPKBP1O60336 1514 aa7.08□□□□□ -1.28
LRCH3-213ENST00000471667 A0A0G2JS52 829 aa7.08□□□□□ -1.28
LRCH3-213ENST00000471667 FAM98CQ17RN3 349 aaKnown RBP7.08□□□□□ -1.28
LRCH3-213ENST00000471667 GRIN2BQ13224 1484 aa7.08□□□□□ -1.28
LRCH3-213ENST00000471667 RGS20O76081 388 aa7.07□□□□□ -1.28
LRCH3-213ENST00000471667 WDR70Q9NW82 654 aa7.07□□□□□ -1.28
LRCH3-213ENST00000471667 ARIH1Q9Y4X5 557 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-213ENST00000471667 WBP1LQ9NX94 342 aa7.06□□□□□ -1.28
LRCH3-213ENST00000471667 TSKSQ9UJT2 592 aa7.06□□□□□ -1.28
LRCH3-213ENST00000471667 SOGA1O94964 1423 aa7.06□□□□□ -1.28
LRCH3-213ENST00000471667 ITGBL1O95965 494 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-213ENST00000471667 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
LRCH3-213ENST00000471667 PACS2Q86VP3 889 aa7.05□□□□□ -1.28
LRCH3-213ENST00000471667 POLA1P09884 1462 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-213ENST00000471667 PRDM2Q13029 1718 aa7.04□□□□□ -1.28
LRCH3-213ENST00000471667 GRXCR2A6NFK2 248 aa7.04□□□□□ -1.28
LRCH3-213ENST00000471667 PRIM1P49642 420 aaKnown RBP7.04□□□□□ -1.28
LRCH3-213ENST00000471667 LRCH3Q96II8 777 aa7.04□□□□□ -1.28
LRCH3-213ENST00000471667 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-213ENST00000471667 CDCA7LQ96GN5 454 aa7.03□□□□□ -1.28
LRCH3-213ENST00000471667 HPS5Q9UPZ3 1129 aa7.03□□□□□ -1.28
LRCH3-213ENST00000471667 TSPOAP1O95153 1857 aa7.02□□□□□ -1.28
LRCH3-213ENST00000471667 PRSS12P56730 875 aa7.02□□□□□ -1.29
LRCH3-213ENST00000471667 TSR3Q9UJK0 312 aaKnown RBP7.02□□□□□ -1.29
LRCH3-213ENST00000471667 CEP170Q5SW79 1584 aa7.02□□□□□ -1.29
LRCH3-213ENST00000471667 RAD54L2Q9Y4B4 1467 aa7.01□□□□□ -1.29
LRCH3-213ENST00000471667 FAM198AQ9UFP1 575 aa7.01□□□□□ -1.29
LRCH3-213ENST00000471667 SMAPO00193 183 aa7□□□□□ -1.29
LRCH3-213ENST00000471667 KCNC4Q03721 635 aa7□□□□□ -1.29
LRCH3-213ENST00000471667 WIZO95785 1651 aa7□□□□□ -1.29
LRCH3-213ENST00000471667 TEX14Q8IWB6 1497 aa6.99□□□□□ -1.29
LRCH3-213ENST00000471667 OSBPP22059 807 aa6.99□□□□□ -1.29
LRCH3-213ENST00000471667 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
LRCH3-213ENST00000471667 PCF11O94913 1555 aaKnown RBP6.99□□□□□ -1.29
LRCH3-213ENST00000471667 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
LRCH3-213ENST00000471667 PPP4CP60510 307 aa6.98□□□□□ -1.29
LRCH3-213ENST00000471667 SAMD7Q7Z3H4 446 aa6.98□□□□□ -1.29
LRCH3-213ENST00000471667 TATDN2Q93075 761 aa6.98□□□□□ -1.29
LRCH3-213ENST00000471667 IRX2Q9BZI1 471 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-213ENST00000471667 NBPF26B4DH59 902 aa6.97□□□□□ -1.29
LRCH3-213ENST00000471667 PRG4Q92954 1404 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-213ENST00000471667 PNMA3Q9UL41 463 aa6.97□□□□□ -1.29
LRCH3-213ENST00000471667 GRIN2AQ12879 1464 aa6.96□□□□□ -1.3
LRCH3-213ENST00000471667 NUDT18Q6ZVK8 323 aa6.95□□□□□ -1.3
LRCH3-213ENST00000471667 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
LRCH3-213ENST00000471667 PTPRMP28827 1452 aa6.94□□□□□ -1.3
LRCH3-213ENST00000471667 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
LRCH3-213ENST00000471667 NUP160Q12769 1436 aa6.93□□□□□ -1.3
LRCH3-213ENST00000471667 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
LRCH3-213ENST00000471667 SHROOM2Q13796 1616 aa6.93□□□□□ -1.3
LRCH3-213ENST00000471667 HDGFP51858 240 aaKnown RBP6.92□□□□□ -1.3
LRCH3-213ENST00000471667 PADI6Q6TGC4 694 aa6.92□□□□□ -1.3
LRCH3-213ENST00000471667 TTC13Q8NBP0 860 aa6.92□□□□□ -1.3
LRCH3-213ENST00000471667 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-213ENST00000471667 PLB1Q6P1J6 1458 aa6.92□□□□□ -1.3
LRCH3-213ENST00000471667 FGD5Q6ZNL6 1462 aa6.92□□□□□ -1.3
LRCH3-213ENST00000471667 RNF40O75150 1001 aa6.91□□□□□ -1.3
LRCH3-213ENST00000471667 TJAP1Q5JTD0 557 aa6.91□□□□□ -1.3
LRCH3-213ENST00000471667 ARHGEF1Q92888 912 aaKnown RBP6.91□□□□□ -1.3
LRCH3-213ENST00000471667 GLI2P10070 1586 aa6.91□□□□□ -1.3
LRCH3-213ENST00000471667 PBRM1Q86U86 1689 aa6.9□□□□□ -1.3
LRCH3-213ENST00000471667 HSPA2P54652 639 aa6.9□□□□□ -1.3
LRCH3-213ENST00000471667 MTRQ99707 1265 aa6.9□□□□□ -1.3
LRCH3-213ENST00000471667 MLLT3P42568 568 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-213ENST00000471667 KCNV2Q8TDN2 545 aa6.89□□□□□ -1.31
LRCH3-213ENST00000471667 IL21Q9HBE4 155 aa6.89□□□□□ -1.31
LRCH3-213ENST00000471667 ADCY10Q96PN6 1610 aa6.89□□□□□ -1.31
LRCH3-213ENST00000471667 COL17A1Q9UMD9 1497 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-213ENST00000471667 APLP1P51693 650 aa6.88□□□□□ -1.31
LRCH3-213ENST00000471667 SWT1Q5T5J6 900 aaKnown RBP6.88□□□□□ -1.31
LRCH3-213ENST00000471667 ARID4BQ4LE39 1312 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-213ENST00000471667 KIAA0586Q9BVV6 1533 aa6.86□□□□□ -1.31
LRCH3-213ENST00000471667 ASXL2Q76L83 1435 aa6.86□□□□□ -1.31
LRCH3-213ENST00000471667 SLF2Q8IX21 1173 aa6.86□□□□□ -1.31
LRCH3-213ENST00000471667 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
LRCH3-213ENST00000471667 NECTIN2Q92692 538 aa6.86□□□□□ -1.31
LRCH3-213ENST00000471667 EYA1Q99502 592 aa6.86□□□□□ -1.31
LRCH3-213ENST00000471667 FHAD1B1AJZ9 1412 aa6.85□□□□□ -1.31
LRCH3-213ENST00000471667 CCDC88BA6NC98 1476 aa6.85□□□□□ -1.31
LRCH3-213ENST00000471667 IQSEC2Q5JU85 1478 aa6.85□□□□□ -1.31
LRCH3-213ENST00000471667 PPRC1Q5VV67 1664 aaKnown RBP6.84□□□□□ -1.31
LRCH3-213ENST00000471667 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
LRCH3-213ENST00000471667 PTGDRQ13258 359 aa6.84□□□□□ -1.31
LRCH3-213ENST00000471667 PPP1R18Q6NYC8 613 aa6.84□□□□□ -1.31
LRCH3-213ENST00000471667 Q6ZNB5 142 aa6.84□□□□□ -1.31
LRCH3-213ENST00000471667 KIF21BO75037 1637 aa6.83□□□□□ -1.32
LRCH3-213ENST00000471667 ADAMTS12P58397 1594 aa6.83□□□□□ -1.32
LRCH3-213ENST00000471667 UBAP1LF5GYI3 381 aa6.83□□□□□ -1.32
LRCH3-213ENST00000471667 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
LRCH3-213ENST00000471667 ABCC2Q92887 1545 aa6.82□□□□□ -1.32
LRCH3-213ENST00000471667 COPS2P61201 443 aa6.82□□□□□ -1.32
LRCH3-213ENST00000471667 NKX2-3Q8TAU0 364 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms